RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 FBXL16Q8N461 479 aa12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 TDRD5Q8NAT2 981 aaKnown RBP12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 CCDC148Q8NFR7 591 aa12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 CRYGNQ8WXF5 182 aa12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 RIT2Q99578 217 aa12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 GCOM2Q9BZD3 368 aaPredicted RBP12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 ADAMTS10Q9H324 1103 aa12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 DISC1Q9NRI5 854 aa12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 STK39Q9UEW8 545 aa12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 CACNA1HO95180 2353 aa12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 ATG2AQ2TAZ0 1938 aa12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 H0Y858 1186 aa12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 CLASP2O75122 1294 aaKnown RBP12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 SFPQP23246 707 aaKnown RBP eCLIP12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 PSMA5P28066 241 aa12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 GPC3P51654 580 aa12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 POLGP54098 1239 aaPredicted RBP12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 BCAR1P56945 870 aa12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 PPFIBP1Q86W92 1011 aa12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 ZDHHC14Q8IZN3 488 aa12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 LRRC71Q8N4P6 559 aa12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 LINC01465Q8N7H1 131 aa12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 HELQQ8TDG4 1101 aa12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 TCEANC2Q96MN5 208 aa12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 MFSD1Q9H3U5 465 aa12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 POMKQ9H5K3 350 aa12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 RNF19AQ9NV58 838 aa12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 FAM86C1Q9NVL1 165 aa12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 DBR1Q9UK59 544 aaKnown RBP12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 USTQ9Y2C2 406 aa12.08□□□□□ -0.48
CSNK1D-226ENST00000585026 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 SPDYE4A6NLX3 237 aa12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 C2CD4DB7Z1M9 353 aa12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 PROB1E7EW31 1015 aa12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 PRPF3O43395 683 aaKnown RBP12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 GAS7O60861 476 aa12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 CDC27P30260 824 aa12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 ADD1P35611 737 aaKnown RBP12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 PBX3P40426 434 aa12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 USP11P51784 963 aa12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 NEK4P51957 841 aa12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 PRKCEQ02156 737 aa12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 CLLU1OSQ5K130 101 aa12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 GLB1LQ6UWU2 654 aa12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 ZNF598Q86UK7 904 aaKnown RBP12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 VPS52Q8N1B4 723 aa12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 RDM1Q8NG50 284 aa12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 ACSF2Q96CM8 615 aaPredicted RBP12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 JPH2Q9BR39 696 aaPredicted RBP12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 TEKT3Q9BXF9 490 aa12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 AGXT2Q9BYV1 514 aa12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 FAM217BQ9NTX9 383 aaPredicted RBP12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 IRAK3Q9Y616 596 aa12.07□□□□□ -0.48
CSNK1D-226ENST00000585026 PTPRZ1P23471 2315 aaPredicted RBP12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 ZC3H11AO75152 810 aaKnown RBP eCLIP12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 BRD1O95696 1058 aa12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 CTSAP10619 480 aa12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 RAB27AP51159 221 aa12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 CLCN5P51795 746 aa12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 RNASELQ05823 741 aaKnown RBP12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 XKR3Q5GH77 459 aa12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 RARS2Q5T160 578 aaKnown RBP12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 ASTLQ6HA08 431 aaPredicted RBP12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 TWF2Q6IBS0 349 aaKnown RBP12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 KIAA1841Q6NSI8 718 aa12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 ELMSAN1Q6PJG2 1045 aa12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 RUFY3Q7L099 469 aa12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 OTOP3Q7RTS5 596 aa12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 DDX53Q86TM3 631 aaKnown RBP12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 CABP7Q86V35 215 aa12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 ZNF410Q86VK4 478 aa12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 HSCBQ8IWL3 235 aa12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 PGBD4Q96DM1 585 aa12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 TRAIPQ9BWF2 469 aa12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 EMILIN2Q9BXX0 1053 aa12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 CYP26B1Q9NR63 512 aa12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 DAXXQ9UER7 740 aaPredicted RBP12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 KIAA1671Q9BY89 1806 aa12.06□□□□□ -0.48
CSNK1D-226ENST00000585026 NT5C1B-RDH14C9J2C7 533 aa12.05□□□□□ -0.48
CSNK1D-226ENST00000585026 K7ELQ4 463 aaPredicted RBP12.05□□□□□ -0.48
CSNK1D-226ENST00000585026 CHMP2AO43633 222 aa12.05□□□□□ -0.48
CSNK1D-226ENST00000585026 ZNF862O60290 1169 aa12.05□□□□□ -0.48
CSNK1D-226ENST00000585026 CD2BP2O95400 341 aaKnown RBP12.05□□□□□ -0.48
CSNK1D-226ENST00000585026 PDGFBP01127 241 aaPredicted RBP12.05□□□□□ -0.48
CSNK1D-226ENST00000585026 PHKA2P46019 1235 aa12.05□□□□□ -0.48
CSNK1D-226ENST00000585026 NOMO2Q5JPE7 1267 aa12.05□□□□□ -0.48
CSNK1D-226ENST00000585026 LRCH2Q5VUJ6 765 aa12.05□□□□□ -0.48
CSNK1D-226ENST00000585026 MIER3Q7Z3K6 550 aa12.05□□□□□ -0.48
CSNK1D-226ENST00000585026 IGSF21Q96ID5 467 aa12.05□□□□□ -0.48
CSNK1D-226ENST00000585026 ZNF668Q96K58 619 aaPredicted RBP12.05□□□□□ -0.48
CSNK1D-226ENST00000585026 ZBP1Q9H171 429 aa12.05□□□□□ -0.48
CSNK1D-226ENST00000585026 LIMD1Q9UGP4 676 aa12.05□□□□□ -0.48
CSNK1D-226ENST00000585026 CYP46A1Q9Y6A2 500 aa12.05□□□□□ -0.48
CSNK1D-226ENST00000585026 FNDC1Q4ZHG4 1894 aaPredicted RBP12.05□□□□□ -0.48
CSNK1D-226ENST00000585026 PLXNA4Q9HCM2 1894 aa12.05□□□□□ -0.48
CSNK1D-226ENST00000585026 MSH4O15457 936 aa12.04□□□□□ -0.48
CSNK1D-226ENST00000585026 DKC1O60832 514 aaKnown RBP eCLIP12.04□□□□□ -0.48
CSNK1D-226ENST00000585026 FGFR4P22455 802 aa12.04□□□□□ -0.48
CSNK1D-226ENST00000585026 NBL1P41271 181 aa12.04□□□□□ -0.48
CSNK1D-226ENST00000585026 EVCP57679 992 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms