RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 FOSBP53539 338 aa22.91■■□□□ 1.26
TOP3A-219ENST00000584887 RBM10P98175 930 aaKnown RBP22.91■■□□□ 1.26
TOP3A-219ENST00000584887 CDC42EP1Q00587 391 aa22.91■■□□□ 1.26
TOP3A-219ENST00000584887 PPP2R5CQ13362 524 aa22.91■■□□□ 1.26
TOP3A-219ENST00000584887 TWF2Q6IBS0 349 aaKnown RBP22.91■■□□□ 1.26
TOP3A-219ENST00000584887 KCNT2Q6UVM3 1135 aa22.91■■□□□ 1.26
TOP3A-219ENST00000584887 ANO5Q75V66 913 aa22.91■■□□□ 1.26
TOP3A-219ENST00000584887 NECAB1Q8N987 351 aa22.91■■□□□ 1.26
TOP3A-219ENST00000584887 WASF1Q92558 559 aa22.91■■□□□ 1.26
TOP3A-219ENST00000584887 FAM122AQ96E09 287 aa22.91■■□□□ 1.26
TOP3A-219ENST00000584887 CEP89Q96ST8 783 aa22.91■■□□□ 1.26
TOP3A-219ENST00000584887 KCNMB3Q9NPA1 279 aa22.91■■□□□ 1.26
TOP3A-219ENST00000584887 IGKV6-21A0A0C4DH24 114 aa22.9■■□□□ 1.26
TOP3A-219ENST00000584887 A0A0U1RQF3 1178 aa22.9■■□□□ 1.26
TOP3A-219ENST00000584887 C19orf67A6NJJ6 358 aa22.9■■□□□ 1.26
TOP3A-219ENST00000584887 MAFO75444 373 aaPredicted RBP22.9■■□□□ 1.26
TOP3A-219ENST00000584887 CTDNEP1O95476 244 aa22.9■■□□□ 1.26
TOP3A-219ENST00000584887 PPM1AP35813 382 aa22.9■■□□□ 1.26
TOP3A-219ENST00000584887 NPEPPSP55786 919 aa22.9■■□□□ 1.26
TOP3A-219ENST00000584887 ANAPC15P60006 121 aa22.9■■□□□ 1.26
TOP3A-219ENST00000584887 LONRF3Q496Y0 759 aa22.9■■□□□ 1.26
TOP3A-219ENST00000584887 NCAPH2Q6IBW4 605 aa22.9■■□□□ 1.26
TOP3A-219ENST00000584887 KSR1Q8IVT5 923 aa22.9■■□□□ 1.26
TOP3A-219ENST00000584887 MRPS27Q92552 414 aaKnown RBP22.9■■□□□ 1.26
TOP3A-219ENST00000584887 TCF25Q9BQ70 676 aa22.9■■□□□ 1.26
TOP3A-219ENST00000584887 JPH2Q9BR39 696 aaPredicted RBP22.9■■□□□ 1.26
TOP3A-219ENST00000584887 CYP26B1Q9NR63 512 aa22.9■■□□□ 1.26
TOP3A-219ENST00000584887 BMP2KQ9NSY1 1161 aaPredicted RBP22.9■■□□□ 1.26
TOP3A-219ENST00000584887 PIN4Q9Y237 131 aaKnown RBP22.9■■□□□ 1.26
TOP3A-219ENST00000584887 FAM205CA6NFA0 338 aa22.89■■□□□ 1.25
TOP3A-219ENST00000584887 DKC1O60832 514 aaKnown RBP eCLIP22.89■■□□□ 1.25
TOP3A-219ENST00000584887 ATF7P17544 494 aaPredicted RBP22.89■■□□□ 1.25
TOP3A-219ENST00000584887 DUSP6Q16828 381 aa22.89■■□□□ 1.25
TOP3A-219ENST00000584887 PPP4R3AQ6IN85 833 aa22.89■■□□□ 1.25
TOP3A-219ENST00000584887 PDE12Q6L8Q7 609 aaKnown RBP22.89■■□□□ 1.25
TOP3A-219ENST00000584887 CATSPER4Q7RTX7 472 aa22.89■■□□□ 1.25
TOP3A-219ENST00000584887 ZNF598Q86UK7 904 aaKnown RBP22.89■■□□□ 1.25
TOP3A-219ENST00000584887 ZNF410Q86VK4 478 aa22.89■■□□□ 1.25
TOP3A-219ENST00000584887 POTEDQ86YR6 584 aa22.89■■□□□ 1.25
TOP3A-219ENST00000584887 SMRP1Q8NCR6 262 aa22.89■■□□□ 1.25
TOP3A-219ENST00000584887 CEP170P1Q96L14 293 aa22.89■■□□□ 1.25
TOP3A-219ENST00000584887 NAP1L4Q99733 375 aaKnown RBP22.89■■□□□ 1.25
TOP3A-219ENST00000584887 BRMS1Q9HCU9 246 aa22.89■■□□□ 1.25
TOP3A-219ENST00000584887 SPG21Q9NZD8 308 aa22.89■■□□□ 1.25
TOP3A-219ENST00000584887 LZTS1Q9Y250 596 aa22.89■■□□□ 1.25
TOP3A-219ENST00000584887 FSCN2O14926 492 aa22.88■■□□□ 1.25
TOP3A-219ENST00000584887 EYA4O95677 639 aa22.88■■□□□ 1.25
TOP3A-219ENST00000584887 EOMESO95936 686 aa22.88■■□□□ 1.25
TOP3A-219ENST00000584887 P4HBP07237 508 aaKnown RBP22.88■■□□□ 1.25
TOP3A-219ENST00000584887 CA8P35219 290 aa22.88■■□□□ 1.25
TOP3A-219ENST00000584887 KRT2P35908 639 aa22.88■■□□□ 1.25
TOP3A-219ENST00000584887 PLA2G5P39877 138 aa22.88■■□□□ 1.25
TOP3A-219ENST00000584887 POLGP54098 1239 aaPredicted RBP22.88■■□□□ 1.25
TOP3A-219ENST00000584887 PLCB3Q01970 1234 aa22.88■■□□□ 1.25
TOP3A-219ENST00000584887 KRT17Q04695 432 aa22.88■■□□□ 1.25
TOP3A-219ENST00000584887 COASYQ13057 564 aa22.88■■□□□ 1.25
TOP3A-219ENST00000584887 NR5A1Q13285 461 aa22.88■■□□□ 1.25
TOP3A-219ENST00000584887 EARS2Q5JPH6 523 aaKnown RBP22.88■■□□□ 1.25
TOP3A-219ENST00000584887 SLC7A3Q8WY07 619 aa22.88■■□□□ 1.25
TOP3A-219ENST00000584887 LPPQ93052 612 aa22.88■■□□□ 1.25
TOP3A-219ENST00000584887 CDCA3Q99618 268 aaPredicted RBP22.88■■□□□ 1.25
TOP3A-219ENST00000584887 INO80BQ9C086 356 aaPredicted RBP22.88■■□□□ 1.25
TOP3A-219ENST00000584887 CHST12Q9NRB3 414 aa22.88■■□□□ 1.25
TOP3A-219ENST00000584887 USP15Q9Y4E8 981 aaPredicted RBP22.88■■□□□ 1.25
TOP3A-219ENST00000584887 PRR33A8MZF0 331 aa22.87■■□□□ 1.25
TOP3A-219ENST00000584887 LARGE1O95461 756 aa22.87■■□□□ 1.25
TOP3A-219ENST00000584887 LLGL2Q6P1M3 1020 aa22.87■■□□□ 1.25
TOP3A-219ENST00000584887 TMC7Q7Z402 723 aa22.87■■□□□ 1.25
TOP3A-219ENST00000584887 ZNF579Q8NAF0 562 aaKnown RBP22.87■■□□□ 1.25
TOP3A-219ENST00000584887 VN1R2Q8NFZ6 395 aa22.87■■□□□ 1.25
TOP3A-219ENST00000584887 HAS1Q92839 578 aa22.87■■□□□ 1.25
TOP3A-219ENST00000584887 TMEM143Q96AN5 459 aa22.87■■□□□ 1.25
TOP3A-219ENST00000584887 LXNQ9BS40 222 aa22.87■■□□□ 1.25
TOP3A-219ENST00000584887 MRPL9Q9BYD2 267 aaKnown RBP22.87■■□□□ 1.25
TOP3A-219ENST00000584887 WRAP73Q9P2S5 460 aaPredicted RBP22.87■■□□□ 1.25
TOP3A-219ENST00000584887 MUTYHQ9UIF7 546 aa22.87■■□□□ 1.25
TOP3A-219ENST00000584887 INPP5FQ9Y2H2 1132 aa22.87■■□□□ 1.25
TOP3A-219ENST00000584887 COL4A3BPQ9Y5P4 624 aa22.87■■□□□ 1.25
TOP3A-219ENST00000584887 FSD2A1L4K1 749 aa22.86■■□□□ 1.25
TOP3A-219ENST00000584887 TBX3O15119 743 aa22.86■■□□□ 1.25
TOP3A-219ENST00000584887 BAG4O95429 457 aaKnown RBP22.86■■□□□ 1.25
TOP3A-219ENST00000584887 SRGAP2BP0DMP2 458 aa22.86■■□□□ 1.25
TOP3A-219ENST00000584887 PHKA2P46019 1235 aa22.86■■□□□ 1.25
TOP3A-219ENST00000584887 CYP4A11Q02928 519 aa22.86■■□□□ 1.25
TOP3A-219ENST00000584887 EPHA7Q15375 998 aa22.86■■□□□ 1.25
TOP3A-219ENST00000584887 ME3Q16798 604 aa22.86■■□□□ 1.25
TOP3A-219ENST00000584887 RNF135Q8IUD6 432 aa22.86■■□□□ 1.25
TOP3A-219ENST00000584887 GTF3C6Q969F1 213 aa22.86■■□□□ 1.25
TOP3A-219ENST00000584887 APOL5Q9BWW9 433 aa22.86■■□□□ 1.25
TOP3A-219ENST00000584887 RGL1Q9NZL6 768 aa22.86■■□□□ 1.25
TOP3A-219ENST00000584887 HIDE1A8MVS5 230 aa22.85■■□□□ 1.25
TOP3A-219ENST00000584887 NT5C1B-RDH14C9J2C7 533 aa22.85■■□□□ 1.25
TOP3A-219ENST00000584887 ZC3H11AO75152 810 aaKnown RBP eCLIP22.85■■□□□ 1.25
TOP3A-219ENST00000584887 SRGAP2CP0DJJ0 459 aa22.85■■□□□ 1.25
TOP3A-219ENST00000584887 FDPSP14324 419 aaKnown RBP22.85■■□□□ 1.25
TOP3A-219ENST00000584887 CTTNQ14247 550 aaKnown RBP22.85■■□□□ 1.25
TOP3A-219ENST00000584887 SLC39A11Q8N1S5 342 aa22.85■■□□□ 1.25
TOP3A-219ENST00000584887 PSPC1Q8WXF1 523 aaKnown RBP22.85■■□□□ 1.25
TOP3A-219ENST00000584887 DYDC2Q96IM9 177 aa22.85■■□□□ 1.25
TOP3A-219ENST00000584887 NGRNQ9NPE2 291 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms