RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 MTUS1Q9ULD2 1270 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 LRFN2Q9ULH4 789 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.05□□□□□ -0.64
SKA2-208ENST00000583927 COL4A3BPQ9Y5P4 624 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 STK24Q9Y6E0 443 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 MYH15Q9Y2K3 1946 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 A0A087WZ62 844 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 POTEMA6NI47 508 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 OR52Z1P0C646 297 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 SPATA31C1P0DKV0 1188 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 SKIP12755 728 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 SFPQP23246 707 aaKnown RBP eCLIP11.04□□□□□ -0.64
SKA2-208ENST00000583927 CTNNB1P35222 781 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 PRPHP41219 470 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 RARRES1P49788 294 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 TOB1P50616 345 aaPredicted RBP11.04□□□□□ -0.64
SKA2-208ENST00000583927 MRPS5P82675 430 aaKnown RBP11.04□□□□□ -0.64
SKA2-208ENST00000583927 CYP4A11Q02928 519 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 GPM6BQ13491 265 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 CUL4AQ13619 759 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 CTTNQ14247 550 aaKnown RBP11.04□□□□□ -0.64
SKA2-208ENST00000583927 COL19A1Q14993 1142 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 EMC2Q15006 297 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 CCDC85BQ15834 202 aaPredicted RBP11.04□□□□□ -0.64
SKA2-208ENST00000583927 AAK1Q2M2I8 961 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 TIGD5Q53EQ6 642 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 XKR9Q5GH70 373 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 ZNF598Q86UK7 904 aaKnown RBP11.04□□□□□ -0.64
SKA2-208ENST00000583927 FERMT3Q86UX7 667 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 RHPN2Q8IUC4 686 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 IGSF22Q8N9C0 903 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 ZNF579Q8NAF0 562 aaKnown RBP11.04□□□□□ -0.64
SKA2-208ENST00000583927 ERMNQ8TAM6 284 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 PPP1R16BQ96T49 567 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 MTRQ99707 1265 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 SH2D3AQ9BRG2 576 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 FDXACB1Q9BRP7 624 aaPredicted RBP11.04□□□□□ -0.64
SKA2-208ENST00000583927 NFKBIZQ9BYH8 718 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 ATP6V0A4Q9HBG4 840 aa11.04□□□□□ -0.64
SKA2-208ENST00000583927 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.03□□□□□ -0.64
SKA2-208ENST00000583927 CARNS1A5YM72 827 aa11.03□□□□□ -0.64
SKA2-208ENST00000583927 ZBTB39O15060 712 aa11.03□□□□□ -0.64
SKA2-208ENST00000583927 ZNF623O75123 536 aa11.03□□□□□ -0.64
SKA2-208ENST00000583927 GJB2P29033 226 aa11.03□□□□□ -0.64
SKA2-208ENST00000583927 TECP42680 631 aa11.03□□□□□ -0.64
SKA2-208ENST00000583927 LAMTOR4Q0VGL1 99 aa11.03□□□□□ -0.64
SKA2-208ENST00000583927 ZNF174Q15697 407 aa11.03□□□□□ -0.64
SKA2-208ENST00000583927 CSPP1Q1MSJ5 1256 aa11.03□□□□□ -0.64
SKA2-208ENST00000583927 RILPL1Q5EBL4 403 aa11.03□□□□□ -0.64
SKA2-208ENST00000583927 HAUS3Q68CZ6 603 aa11.03□□□□□ -0.64
SKA2-208ENST00000583927 CATSPER3Q86XQ3 398 aa11.03□□□□□ -0.64
SKA2-208ENST00000583927 ECHDC2Q86YB7 292 aa11.03□□□□□ -0.64
SKA2-208ENST00000583927 PRPF31Q8WWY3 499 aaKnown RBP11.03□□□□□ -0.64
SKA2-208ENST00000583927 PPM1EQ8WY54 764 aa11.03□□□□□ -0.64
SKA2-208ENST00000583927 SCLT1Q96NL6 688 aa11.03□□□□□ -0.64
SKA2-208ENST00000583927 ASB2Q96Q27 587 aa11.03□□□□□ -0.64
SKA2-208ENST00000583927 NACC1Q96RE7 527 aa11.03□□□□□ -0.64
SKA2-208ENST00000583927 COL25A1Q9BXS0 654 aaPredicted RBP11.03□□□□□ -0.64
SKA2-208ENST00000583927 TMEM117Q9H0C3 514 aa11.03□□□□□ -0.64
SKA2-208ENST00000583927 XPNPEP1Q9NQW7 623 aa11.03□□□□□ -0.64
SKA2-208ENST00000583927 AGPAT5Q9NUQ2 364 aa11.03□□□□□ -0.64
SKA2-208ENST00000583927 MRPL42Q9Y6G3 142 aaKnown RBP11.03□□□□□ -0.64
SKA2-208ENST00000583927 DLL1O00548 723 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 NCK2O43639 380 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 ATF7P17544 494 aaPredicted RBP11.02□□□□□ -0.65
SKA2-208ENST00000583927 ATP2B1P20020 1258 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 AXLP30530 894 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 ARL2P36404 184 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 PHKA2P46019 1235 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 RAB27AP51159 221 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 PTENP60484 403 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 UBE3AQ05086 875 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 FAM102BQ5T8I3 360 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 KSR1Q8IVT5 923 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 KCTD17Q8N5Z5 321 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 MCPH1Q8NEM0 835 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 HLA-CQ95604 372 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 NLRP4Q96MN2 994 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 CASD1Q96PB1 797 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 RAB34Q9BZG1 259 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 NSUN3Q9H649 340 aaKnown RBP11.02□□□□□ -0.65
SKA2-208ENST00000583927 PRDM6Q9NQX0 595 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.02□□□□□ -0.65
SKA2-208ENST00000583927 AAASQ9NRG9 546 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 RNF19AQ9NV58 838 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 PLAGL2Q9UPG8 496 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 SMC3Q9UQE7 1217 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 CITO14578 2027 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 TRIOO75962 3097 aa11.02□□□□□ -0.65
SKA2-208ENST00000583927 MED24O75448 989 aa11.01□□□□□ -0.65
SKA2-208ENST00000583927 CSDE1O75534 798 aaKnown RBP11.01□□□□□ -0.65
SKA2-208ENST00000583927 PTGDRQ13258 359 aa11.01□□□□□ -0.65
SKA2-208ENST00000583927 CAMK1Q14012 370 aa11.01□□□□□ -0.65
SKA2-208ENST00000583927 TFDP1Q14186 410 aa11.01□□□□□ -0.65
SKA2-208ENST00000583927 CATSPER4Q7RTX7 472 aa11.01□□□□□ -0.65
SKA2-208ENST00000583927 MICALL1Q8N3F8 863 aa11.01□□□□□ -0.65
SKA2-208ENST00000583927 RNF149Q8NC42 400 aa11.01□□□□□ -0.65
SKA2-208ENST00000583927 SPPL3Q8TCT6 385 aa11.01□□□□□ -0.65
SKA2-208ENST00000583927 PIGOQ8TEQ8 1089 aa11.01□□□□□ -0.65
SKA2-208ENST00000583927 TMEM143Q96AN5 459 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms