RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 RPN1P04843 607 aaKnown RBP12.1□□□□□ -0.47
TOP3A-216ENST00000583804 GLRA2P23416 452 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 PEX3P56589 373 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 NLRP11P59045 1033 aaKnown RBP12.1□□□□□ -0.47
TOP3A-216ENST00000583804 ZNF445P59923 1031 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 MAPK7Q13164 816 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 BFSP2Q13515 415 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 MXD4Q14582 209 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-216ENST00000583804 KIZQ2M2Z5 673 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 DPCR1Q3MIW9 517 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 ANO6Q4KMQ2 910 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 LRSAM1Q6UWE0 723 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 RBM43Q6ZSC3 357 aaKnown RBP12.1□□□□□ -0.47
TOP3A-216ENST00000583804 CCDC65Q8IXS2 484 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 CCDC155Q8N6L0 562 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 ASAP3Q8TDY4 903 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 NLRP7Q8WX94 980 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 DHX38Q92620 1227 aaKnown RBP12.1□□□□□ -0.47
TOP3A-216ENST00000583804 DPF3Q92784 378 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 PPP1R12CQ9BZL4 782 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 DNAJC25Q9H1X3 360 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 PARVGQ9HBI0 331 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 PANK4Q9NVE7 773 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 TBC1D7Q9P0N9 293 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 TRIP12Q14669 1992 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-216ENST00000583804 LRRIQ4A6NIV6 560 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 M0QZ92 97 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 RPLP2P05387 115 aaKnown RBP12.09□□□□□ -0.47
TOP3A-216ENST00000583804 MYL1P05976 194 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 CCDC192P0DO97 292 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 CKBP12277 381 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 PLS3P13797 630 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 GPC3P51654 580 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 MRPS6P82932 125 aaKnown RBP12.09□□□□□ -0.47
TOP3A-216ENST00000583804 CDC42EP1Q00587 391 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 DMP1Q13316 513 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-216ENST00000583804 TFDP1Q14186 410 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 PPP2R5AQ15172 486 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 STX1AQ16623 288 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 TRIM71Q2Q1W2 868 aaKnown RBP12.09□□□□□ -0.47
TOP3A-216ENST00000583804 KMT5BQ4FZB7 885 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 HERC4Q5GLZ8 1057 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-216ENST00000583804 ODR4Q5SWX8 454 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 ZNF618Q5T7W0 954 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 C7orf61Q8IZ16 206 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 RNF149Q8NC42 400 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 CAGE1Q8TC20 777 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 CCDC47Q96A33 483 aaKnown RBP12.09□□□□□ -0.47
TOP3A-216ENST00000583804 FUCA2Q9BTY2 467 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 HIPK3Q9H422 1215 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 LARSQ9P2J5 1176 aaKnown RBP12.09□□□□□ -0.47
TOP3A-216ENST00000583804 MAPK8IP1Q9UQF2 711 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 GDAQ9Y2T3 454 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 CDY2AQ9Y6F7 541 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 LOXHD1Q8IVV2 1947 aa12.09□□□□□ -0.47
TOP3A-216ENST00000583804 A0A087WZ62 844 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 EVI5O60447 810 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 SLC34A2O95436 690 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 GAP43P17677 238 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 SMTNP53814 917 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 CAPSQ13938 189 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 KLHL10Q6JEL2 608 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 CNNM4Q6P4Q7 775 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 UNC13DQ70J99 1090 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 RPAINQ86UA6 219 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 SFR1Q86XK3 245 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 ELOA2Q8IYF1 753 aaPredicted RBP12.08□□□□□ -0.47
TOP3A-216ENST00000583804 DEPTORQ8TB45 409 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 BSNDQ8WZ55 320 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 OSMRQ99650 979 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 FDXACB1Q9BRP7 624 aaPredicted RBP12.08□□□□□ -0.47
TOP3A-216ENST00000583804 KIFC3Q9BVG8 833 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 NOC4LQ9BVI4 516 aaKnown RBP12.08□□□□□ -0.47
TOP3A-216ENST00000583804 CELF4Q9BZC1 486 aaKnown RBP12.08□□□□□ -0.47
TOP3A-216ENST00000583804 C17orf75Q9HAS0 396 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 CDHR5Q9HBB8 845 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 KMT5AQ9NQR1 393 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 EXOC1Q9NV70 894 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 PRKAG2Q9UGJ0 569 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 TBX21Q9UL17 535 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 TRPV2Q9Y5S1 764 aa12.08□□□□□ -0.47
TOP3A-216ENST00000583804 UMODL1Q5DID0 1318 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 EVPLQ92817 2033 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 PVALEFA0A1B0GWK0 134 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 RBAK-RBAKDNI3L0D1 243 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 KLRC4O43908 158 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 CAND2O75155 1236 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 GPR32O75388 356 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 CHRNA1P02708 482 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 RAG1P15918 1043 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 SELPP16109 830 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 BMP6P22004 513 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 CYP2C18P33260 490 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 NAMPTP43490 491 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 PHKA2P46019 1235 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 NPTX2P47972 431 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 ZNF131P52739 623 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 CRYBB1P53674 252 aaPredicted RBP12.08□□□□□ -0.48
TOP3A-216ENST00000583804 CCL23P55773 120 aa12.08□□□□□ -0.48
TOP3A-216ENST00000583804 NLRP12P59046 1061 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms