RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 SPRYD3Q8NCJ5 442 aa27.74■■■□□ 2.03
TSEN54-209ENST00000583454 ERMNQ8TAM6 284 aa27.74■■■□□ 2.03
TSEN54-209ENST00000583454 SH2D3AQ9BRG2 576 aa27.74■■■□□ 2.03
TSEN54-209ENST00000583454 PLVAPQ9BX97 442 aa27.74■■■□□ 2.03
TSEN54-209ENST00000583454 RAB34Q9BZG1 259 aa27.74■■■□□ 2.03
TSEN54-209ENST00000583454 LRWD1Q9UFC0 647 aa27.74■■■□□ 2.03
TSEN54-209ENST00000583454 ZBTB39O15060 712 aa27.73■■■□□ 2.03
TSEN54-209ENST00000583454 MAFO75444 373 aaPredicted RBP27.73■■■□□ 2.03
TSEN54-209ENST00000583454 BMP15O95972 392 aa27.73■■■□□ 2.03
TSEN54-209ENST00000583454 XRCC6P12956 609 aaKnown RBP eCLIP27.73■■■□□ 2.03
TSEN54-209ENST00000583454 RPA1P27694 616 aa27.73■■■□□ 2.03
TSEN54-209ENST00000583454 NPEPPSP55786 919 aa27.73■■■□□ 2.03
TSEN54-209ENST00000583454 HYAL1Q12794 435 aa27.73■■■□□ 2.03
TSEN54-209ENST00000583454 PLA2G4FQ68DD2 849 aa27.73■■■□□ 2.03
TSEN54-209ENST00000583454 ZNF579Q8NAF0 562 aaKnown RBP27.73■■■□□ 2.03
TSEN54-209ENST00000583454 ALG13Q9NP73 1137 aaKnown RBP27.73■■■□□ 2.03
TSEN54-209ENST00000583454 PLAGL2Q9UPG8 496 aa27.73■■■□□ 2.03
TSEN54-209ENST00000583454 MED24O75448 989 aa27.72■■■□□ 2.03
TSEN54-209ENST00000583454 DNAJB1P25685 340 aa27.72■■■□□ 2.03
TSEN54-209ENST00000583454 TMOD1P28289 359 aa27.72■■■□□ 2.03
TSEN54-209ENST00000583454 P2RX5Q93086 422 aa27.72■■■□□ 2.03
TSEN54-209ENST00000583454 LRFN3Q9BTN0 628 aa27.72■■■□□ 2.03
TSEN54-209ENST00000583454 ANKEF1Q9NU02 776 aa27.72■■■□□ 2.03
TSEN54-209ENST00000583454 STK24Q9Y6E0 443 aa27.72■■■□□ 2.03
TSEN54-209ENST00000583454 PI4K2BG5E9Z4 385 aa27.71■■■□□ 2.03
TSEN54-209ENST00000583454 MUTP22033 750 aa27.71■■■□□ 2.03
TSEN54-209ENST00000583454 CLCN3P51790 818 aa27.71■■■□□ 2.03
TSEN54-209ENST00000583454 SF3A1Q15459 793 aaKnown RBP27.71■■■□□ 2.03
TSEN54-209ENST00000583454 PUS10Q3MIT2 529 aaKnown RBP27.71■■■□□ 2.03
TSEN54-209ENST00000583454 PAN2Q504Q3 1202 aaKnown RBP27.71■■■□□ 2.03
TSEN54-209ENST00000583454 FAM173BQ6P4H8 233 aa27.71■■■□□ 2.03
TSEN54-209ENST00000583454 GJD3Q8N144 294 aa27.71■■■□□ 2.03
TSEN54-209ENST00000583454 LRRC71Q8N4P6 559 aa27.71■■■□□ 2.03
TSEN54-209ENST00000583454 CEP170P1Q96L14 293 aa27.71■■■□□ 2.03
TSEN54-209ENST00000583454 CLDND1Q9NY35 253 aa27.71■■■□□ 2.03
TSEN54-209ENST00000583454 ITGB1P05556 798 aa27.7■■■□□ 2.02
TSEN54-209ENST00000583454 STAG3L1P0CL83 205 aa27.7■■■□□ 2.02
TSEN54-209ENST00000583454 GTF2F1P35269 517 aaKnown RBP eCLIP27.7■■■□□ 2.02
TSEN54-209ENST00000583454 SARSP49591 514 aaKnown RBP27.7■■■□□ 2.02
TSEN54-209ENST00000583454 DLX2Q07687 328 aaPredicted RBP27.7■■■□□ 2.02
TSEN54-209ENST00000583454 NFX1Q12986 1120 aaKnown RBP27.7■■■□□ 2.02
TSEN54-209ENST00000583454 BECN1Q14457 450 aa27.7■■■□□ 2.02
TSEN54-209ENST00000583454 XKR9Q5GH70 373 aa27.7■■■□□ 2.02
TSEN54-209ENST00000583454 HAUS3Q68CZ6 603 aa27.7■■■□□ 2.02
TSEN54-209ENST00000583454 EXOC8Q8IYI6 725 aa27.7■■■□□ 2.02
TSEN54-209ENST00000583454 ZNF710Q8N1W2 664 aa27.7■■■□□ 2.02
TSEN54-209ENST00000583454 JPH2Q9BR39 696 aaPredicted RBP27.7■■■□□ 2.02
TSEN54-209ENST00000583454 DHX33Q9H6R0 707 aaKnown RBP27.7■■■□□ 2.02
TSEN54-209ENST00000583454 GINS2Q9Y248 185 aa27.7■■■□□ 2.02
TSEN54-209ENST00000583454 ARID2Q68CP9 1835 aa27.69■■■□□ 2.02
TSEN54-209ENST00000583454 GPR32O75388 356 aa27.69■■■□□ 2.02
TSEN54-209ENST00000583454 RPS6KA5O75582 802 aa27.69■■■□□ 2.02
TSEN54-209ENST00000583454 RFC5P40937 340 aa27.69■■■□□ 2.02
TSEN54-209ENST00000583454 SPPL3Q8TCT6 385 aa27.69■■■□□ 2.02
TSEN54-209ENST00000583454 NACC1Q96RE7 527 aa27.69■■■□□ 2.02
TSEN54-209ENST00000583454 MAP7D2Q96T17 732 aa27.69■■■□□ 2.02
TSEN54-209ENST00000583454 RGS18Q9NS28 235 aa27.69■■■□□ 2.02
TSEN54-209ENST00000583454 ST3GAL5Q9UNP4 418 aa27.69■■■□□ 2.02
TSEN54-209ENST00000583454 C9IYK1 514 aa27.68■■■□□ 2.02
TSEN54-209ENST00000583454 VTNP04004 478 aa27.68■■■□□ 2.02
TSEN54-209ENST00000583454 ZSCAN22P10073 491 aaPredicted RBP27.68■■■□□ 2.02
TSEN54-209ENST00000583454 DRP2Q13474 957 aa27.68■■■□□ 2.02
TSEN54-209ENST00000583454 PTPAQ15257 358 aa27.68■■■□□ 2.02
TSEN54-209ENST00000583454 KIZQ2M2Z5 673 aa27.68■■■□□ 2.02
TSEN54-209ENST00000583454 FAM43BQ6ZT52 329 aaPredicted RBP27.68■■■□□ 2.02
TSEN54-209ENST00000583454 FAM228AQ86W67 206 aa27.68■■■□□ 2.02
TSEN54-209ENST00000583454 PIGOQ8TEQ8 1089 aa27.68■■■□□ 2.02
TSEN54-209ENST00000583454 PPP1R16BQ96T49 567 aa27.68■■■□□ 2.02
TSEN54-209ENST00000583454 OSMRQ99650 979 aa27.68■■■□□ 2.02
TSEN54-209ENST00000583454 ADAMTS10Q9H324 1103 aa27.68■■■□□ 2.02
TSEN54-209ENST00000583454 CLIC4Q9Y696 253 aa27.68■■■□□ 2.02
TSEN54-209ENST00000583454 VWA3AA6NCI4 1184 aa27.67■■■□□ 2.02
TSEN54-209ENST00000583454 NCK2O43639 380 aa27.67■■■□□ 2.02
TSEN54-209ENST00000583454 GPR37L1O60883 481 aa27.67■■■□□ 2.02
TSEN54-209ENST00000583454 TBX10O75333 385 aa27.67■■■□□ 2.02
TSEN54-209ENST00000583454 CCT6AP40227 531 aaKnown RBP27.67■■■□□ 2.02
TSEN54-209ENST00000583454 RARRES1P49788 294 aa27.67■■■□□ 2.02
TSEN54-209ENST00000583454 DNM2P50570 870 aa27.67■■■□□ 2.02
TSEN54-209ENST00000583454 CRYBB1P53674 252 aaPredicted RBP27.67■■■□□ 2.02
TSEN54-209ENST00000583454 ECM1Q16610 540 aa27.67■■■□□ 2.02
TSEN54-209ENST00000583454 NAALADL2Q58DX5 795 aa27.67■■■□□ 2.02
TSEN54-209ENST00000583454 POTEGQ6S5H5 508 aa27.67■■■□□ 2.02
TSEN54-209ENST00000583454 KLHL23Q8NBE8 558 aa27.67■■■□□ 2.02
TSEN54-209ENST00000583454 SLC7A3Q8WY07 619 aa27.67■■■□□ 2.02
TSEN54-209ENST00000583454 ADAM2Q99965 735 aa27.67■■■□□ 2.02
TSEN54-209ENST00000583454 MMTAG2Q9BU76 263 aaKnown RBP27.67■■■□□ 2.02
TSEN54-209ENST00000583454 DBR1Q9UK59 544 aaKnown RBP27.67■■■□□ 2.02
TSEN54-209ENST00000583454 AKT3Q9Y243 479 aa27.67■■■□□ 2.02
TSEN54-209ENST00000583454 A0A087WWV3 80 aa27.66■■■□□ 2.02
TSEN54-209ENST00000583454 PP2D1A8MPX8 630 aa27.66■■■□□ 2.02
TSEN54-209ENST00000583454 LINC01565O15544 149 aa27.66■■■□□ 2.02
TSEN54-209ENST00000583454 CSPG5O95196 566 aa27.66■■■□□ 2.02
TSEN54-209ENST00000583454 IRS1P35568 1242 aa27.66■■■□□ 2.02
TSEN54-209ENST00000583454 POLGP54098 1239 aaPredicted RBP27.66■■■□□ 2.02
TSEN54-209ENST00000583454 CDC42EP1Q00587 391 aa27.66■■■□□ 2.02
TSEN54-209ENST00000583454 DSC3Q14574 896 aa27.66■■■□□ 2.02
TSEN54-209ENST00000583454 TMEM31Q5JXX7 168 aa27.66■■■□□ 2.02
TSEN54-209ENST00000583454 KRT79Q5XKE5 535 aa27.66■■■□□ 2.02
TSEN54-209ENST00000583454 EP400NLQ6ZTU2 488 aa27.66■■■□□ 2.02
TSEN54-209ENST00000583454 SNX29Q8TEQ0 813 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms