RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 KCNA5P22460 613 aa9.17□□□□□ -0.94
PPP4R1-225ENST00000583438 HOXA13P31271 388 aaPredicted RBP9.17□□□□□ -0.94
PPP4R1-225ENST00000583438 GTF2F1P35269 517 aaKnown RBP eCLIP9.17□□□□□ -0.94
PPP4R1-225ENST00000583438 LTBRP36941 435 aa9.17□□□□□ -0.94
PPP4R1-225ENST00000583438 RRP1P56182 461 aaKnown RBP9.17□□□□□ -0.94
PPP4R1-225ENST00000583438 PLCB3Q01970 1234 aa9.17□□□□□ -0.94
PPP4R1-225ENST00000583438 DLX2Q07687 328 aaPredicted RBP9.17□□□□□ -0.94
PPP4R1-225ENST00000583438 BFSP2Q13515 415 aa9.17□□□□□ -0.94
PPP4R1-225ENST00000583438 COL19A1Q14993 1142 aa9.17□□□□□ -0.94
PPP4R1-225ENST00000583438 SERINC5Q86VE9 423 aa9.17□□□□□ -0.94
PPP4R1-225ENST00000583438 C1orf127Q8N9H9 656 aa9.17□□□□□ -0.94
PPP4R1-225ENST00000583438 DBF4BQ8NFT6 615 aa9.17□□□□□ -0.94
PPP4R1-225ENST00000583438 PPTC7Q8NI37 304 aa9.17□□□□□ -0.94
PPP4R1-225ENST00000583438 ZBTB10Q96DT7 871 aa9.17□□□□□ -0.94
PPP4R1-225ENST00000583438 PDCD2LQ9BRP1 358 aa9.17□□□□□ -0.94
PPP4R1-225ENST00000583438 C1QTNF1Q9BXJ1 281 aa9.17□□□□□ -0.94
PPP4R1-225ENST00000583438 CHRDQ9H2X0 955 aa9.17□□□□□ -0.94
PPP4R1-225ENST00000583438 CHMP4BQ9H444 224 aaKnown RBP9.17□□□□□ -0.94
PPP4R1-225ENST00000583438 ZSWIM5Q9P217 1185 aa9.17□□□□□ -0.94
PPP4R1-225ENST00000583438 FRMPD4Q14CM0 1322 aa9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 RAD50Q92878 1312 aa9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 KPNA6O60684 536 aa9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 MAP3K6O95382 1288 aa9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 P4HBP07237 508 aaKnown RBP9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 ARAFP10398 606 aa9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 SDSP20132 328 aa9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 MAP2K3P46734 347 aa9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 KCNJ6P48051 423 aa9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 ADAM17P78536 824 aa9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 MRPS9P82933 396 aaKnown RBP9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 SRSF11Q05519 484 aaKnown RBP9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 PGM5Q15124 567 aa9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 LRRFIP1Q32MZ4 808 aaKnown RBP9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 LEXMQ3ZCV2 418 aa9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 PLEKHG4Q58EX7 1191 aa9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 TMEM31Q5JXX7 168 aa9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 GPATCH4Q5T3I0 446 aaKnown RBP9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 TTC39BQ5VTQ0 682 aaPredicted RBP9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 MFSD6Q6ZSS7 791 aa9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 NEK9Q8TD19 979 aa9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 TTC14Q96N46 770 aa9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 TGS1Q96RS0 853 aaKnown RBP9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 RAD9AQ99638 391 aa9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 RC3H2Q9HBD1 1191 aaKnown RBP9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 VAT1LQ9HCJ6 419 aa9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 MAD2L2Q9UI95 211 aa9.16□□□□□ -0.94
PPP4R1-225ENST00000583438 ABHD14A-ACY1A0A1B0GW23 586 aa9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 GGPS1O95749 300 aa9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 CFBP00751 764 aa9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 CTSHP09668 335 aa9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 HDAC1Q13547 482 aaPredicted RBP9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 CAMK1Q14012 370 aa9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 STXBP2Q15833 593 aa9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 DGKDQ16760 1214 aa9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 AAK1Q2M2I8 961 aa9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 EPC2Q52LR7 807 aa9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 TCEAL5Q5H9L2 206 aa9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 CELF3Q5SZQ8 465 aaKnown RBP9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 STOX1Q6ZVD7 989 aa9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 DHX32Q7L7V1 743 aaKnown RBP9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 DGKHQ86XP1 1220 aa9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 MYOCDQ8IZQ8 938 aa9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 OR13H1Q8NG92 308 aa9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 NSUN6Q8TEA1 469 aaKnown RBP9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 SNX29Q8TEQ0 813 aa9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 LINC01599Q8WXQ3 324 aa9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 AVENQ9NQS1 362 aaPredicted RBP9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 MRVI1Q9Y6F6 885 aa9.15□□□□□ -0.94
PPP4R1-225ENST00000583438 ZBTB42B2RXF5 422 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 LINC01565O15544 149 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 PHACTR2O75167 634 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 SIN3BO75182 1162 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 TBX10O75333 385 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 EIF3JO75822 258 aaKnown RBP9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 LGALS2P05162 132 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 SMIM10L2AP0DMW4 78 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 SMIM10L2BP0DMW5 78 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 MYCLP12524 364 aaPredicted RBP9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 CASTP20810 708 aaKnown RBP9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 DNAJB1P25685 340 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 THPOP40225 353 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 MAPK8P45983 427 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 ZP2Q05996 745 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 ASPRV1Q53RT3 343 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 ARHGEF16Q5VV41 709 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 CWC27Q6UX04 472 aaKnown RBP9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 RUFY4Q6ZNE9 571 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 VSIG10LQ86VR7 867 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 FCHSD1Q86WN1 690 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 FBXO11Q86XK2 927 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 SMC5Q8IY18 1101 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 C7orf31Q8N865 590 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 RILPL2Q969X0 211 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 IWS1Q96ST2 819 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 RNPEPQ9H4A4 650 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 IGFLR1Q9H665 355 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 ALG13Q9NP73 1137 aaKnown RBP9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 LMCD1Q9NZU5 365 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 ZDBF2Q9HCK1 2354 aa9.14□□□□□ -0.95
PPP4R1-225ENST00000583438 CFAP54Q96N23 3096 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms