RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 FAM237AA0A1B0GTK4 181 aa24■■□□□ 1.43
TSEN54-208ENST00000583173 ENPP3O14638 875 aa24■■□□□ 1.43
TSEN54-208ENST00000583173 RPS6KA5O75582 802 aa24■■□□□ 1.43
TSEN54-208ENST00000583173 ACTN1P12814 892 aa24■■□□□ 1.43
TSEN54-208ENST00000583173 TXLNAP40222 546 aa24■■□□□ 1.43
TSEN54-208ENST00000583173 CAPSQ13938 189 aa24■■□□□ 1.43
TSEN54-208ENST00000583173 IKBKEQ14164 716 aa24■■□□□ 1.43
TSEN54-208ENST00000583173 FAM102BQ5T8I3 360 aa24■■□□□ 1.43
TSEN54-208ENST00000583173 CCDC73Q6ZRK6 1079 aa24■■□□□ 1.43
TSEN54-208ENST00000583173 NLRP7Q8WX94 980 aa24■■□□□ 1.43
TSEN54-208ENST00000583173 LARP4BQ92615 738 aaKnown RBP24■■□□□ 1.43
TSEN54-208ENST00000583173 TIPINQ9BVW5 301 aa24■■□□□ 1.43
TSEN54-208ENST00000583173 NFKBIZQ9BYH8 718 aa24■■□□□ 1.43
TSEN54-208ENST00000583173 MINDY3Q9H8M7 445 aa24■■□□□ 1.43
TSEN54-208ENST00000583173 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.99■■□□□ 1.43
TSEN54-208ENST00000583173 GPR182O15218 404 aa23.99■■□□□ 1.43
TSEN54-208ENST00000583173 CSDE1O75534 798 aaKnown RBP23.99■■□□□ 1.43
TSEN54-208ENST00000583173 DSC3Q14574 896 aa23.99■■□□□ 1.43
TSEN54-208ENST00000583173 SRGAP1Q7Z6B7 1085 aa23.99■■□□□ 1.43
TSEN54-208ENST00000583173 RNF149Q8NC42 400 aa23.99■■□□□ 1.43
TSEN54-208ENST00000583173 KIFAP3Q92845 792 aa23.99■■□□□ 1.43
TSEN54-208ENST00000583173 A0A1W2PQ27 194 aa23.98■■□□□ 1.43
TSEN54-208ENST00000583173 A0A1W2PQ64 194 aa23.98■■□□□ 1.43
TSEN54-208ENST00000583173 A0A1W2PQD8 194 aa23.98■■□□□ 1.43
TSEN54-208ENST00000583173 LRIT3Q3SXY7 679 aa23.98■■□□□ 1.43
TSEN54-208ENST00000583173 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.98■■□□□ 1.43
TSEN54-208ENST00000583173 LINC01599Q8WXQ3 324 aa23.98■■□□□ 1.43
TSEN54-208ENST00000583173 RNPC3Q96LT9 517 aaKnown RBP23.98■■□□□ 1.43
TSEN54-208ENST00000583173 NLRP4Q96MN2 994 aa23.98■■□□□ 1.43
TSEN54-208ENST00000583173 NTPCRQ9BSD7 190 aaKnown RBP23.98■■□□□ 1.43
TSEN54-208ENST00000583173 HPSEQ9Y251 543 aa23.98■■□□□ 1.43
TSEN54-208ENST00000583173 NPHP3-ACAD11A0A0J9YXS1 232 aa23.97■■□□□ 1.43
TSEN54-208ENST00000583173 MGEA5O60502 916 aa23.97■■□□□ 1.43
TSEN54-208ENST00000583173 EFCAB14O75071 495 aa23.97■■□□□ 1.43
TSEN54-208ENST00000583173 HIP1RO75146 1068 aa23.97■■□□□ 1.43
TSEN54-208ENST00000583173 SSBP05455 408 aaKnown RBP eCLIP23.97■■□□□ 1.43
TSEN54-208ENST00000583173 LAMA2P24043 3122 aaKnown RBP23.97■■□□□ 1.43
TSEN54-208ENST00000583173 WDR5P61964 334 aaKnown RBP23.97■■□□□ 1.43
TSEN54-208ENST00000583173 PAK2Q13177 524 aa23.97■■□□□ 1.43
TSEN54-208ENST00000583173 GIT2Q14161 759 aa23.97■■□□□ 1.43
TSEN54-208ENST00000583173 GPBP1Q86WP2 473 aa23.97■■□□□ 1.43
TSEN54-208ENST00000583173 CRIPAKQ8N1N5 446 aa23.97■■□□□ 1.43
TSEN54-208ENST00000583173 PDILTQ8N807 584 aa23.97■■□□□ 1.43
TSEN54-208ENST00000583173 RASSF8Q8NHQ8 419 aa23.97■■□□□ 1.43
TSEN54-208ENST00000583173 PHOSPHO2Q8TCD6 241 aa23.97■■□□□ 1.43
TSEN54-208ENST00000583173 INO80BQ9C086 356 aaPredicted RBP23.97■■□□□ 1.43
TSEN54-208ENST00000583173 TRIOBPQ9H2D6 2365 aa23.96■■□□□ 1.43
TSEN54-208ENST00000583173 FGFR4P22455 802 aa23.96■■□□□ 1.43
TSEN54-208ENST00000583173 NFX1Q12986 1120 aaKnown RBP23.96■■□□□ 1.43
TSEN54-208ENST00000583173 TFDP1Q14186 410 aa23.96■■□□□ 1.43
TSEN54-208ENST00000583173 ODR4Q5SWX8 454 aa23.96■■□□□ 1.43
TSEN54-208ENST00000583173 CDCA2Q69YH5 1023 aaPredicted RBP23.96■■□□□ 1.43
TSEN54-208ENST00000583173 SV2BQ7L1I2 683 aa23.96■■□□□ 1.43
TSEN54-208ENST00000583173 FTHL17Q9BXU8 183 aa23.96■■□□□ 1.43
TSEN54-208ENST00000583173 TSPYL2Q9H2G4 693 aaPredicted RBP23.96■■□□□ 1.43
TSEN54-208ENST00000583173 FAM13BQ9NYF5 915 aa23.96■■□□□ 1.43
TSEN54-208ENST00000583173 KCNH3Q9ULD8 1083 aa23.96■■□□□ 1.43
TSEN54-208ENST00000583173 LOXHD1Q8IVV2 1947 aa23.96■■□□□ 1.43
TSEN54-208ENST00000583173 MYMKA6NI61 221 aa23.95■■□□□ 1.42
TSEN54-208ENST00000583173 SFI1A8K8P3 1242 aa23.95■■□□□ 1.42
TSEN54-208ENST00000583173 STAT6P42226 847 aa23.95■■□□□ 1.42
TSEN54-208ENST00000583173 NAMPTP43490 491 aa23.95■■□□□ 1.42
TSEN54-208ENST00000583173 ZNF131P52739 623 aa23.95■■□□□ 1.42
TSEN54-208ENST00000583173 FAM189BP81408 668 aa23.95■■□□□ 1.42
TSEN54-208ENST00000583173 DHX8Q14562 1220 aaKnown RBP23.95■■□□□ 1.42
TSEN54-208ENST00000583173 AMHR2Q16671 573 aa23.95■■□□□ 1.42
TSEN54-208ENST00000583173 FAM109BQ6ICB4 259 aaPredicted RBP23.95■■□□□ 1.42
TSEN54-208ENST00000583173 IQUBQ8NA54 791 aa23.95■■□□□ 1.42
TSEN54-208ENST00000583173 C17orf75Q9HAS0 396 aa23.95■■□□□ 1.42
TSEN54-208ENST00000583173 KBTBD4Q9NVX7 518 aa23.95■■□□□ 1.42
TSEN54-208ENST00000583173 SLC4A7Q9Y6M7 1214 aa23.95■■□□□ 1.42
TSEN54-208ENST00000583173 A0A1B0GVL5 298 aa23.94■■□□□ 1.42
TSEN54-208ENST00000583173 POLR2DO15514 142 aaKnown RBP23.94■■□□□ 1.42
TSEN54-208ENST00000583173 HOXA11P31270 313 aaPredicted RBP23.94■■□□□ 1.42
TSEN54-208ENST00000583173 DEFB103AP81534 67 aa23.94■■□□□ 1.42
TSEN54-208ENST00000583173 MBTD1Q05BQ5 628 aa23.94■■□□□ 1.42
TSEN54-208ENST00000583173 HABP4Q5JVS0 413 aaKnown RBP23.94■■□□□ 1.42
TSEN54-208ENST00000583173 DNAJC19Q96DA6 116 aa23.94■■□□□ 1.42
TSEN54-208ENST00000583173 DRC1Q96MC2 740 aa23.94■■□□□ 1.42
TSEN54-208ENST00000583173 SCLT1Q96NL6 688 aa23.94■■□□□ 1.42
TSEN54-208ENST00000583173 REEP2Q9BRK0 252 aa23.94■■□□□ 1.42
TSEN54-208ENST00000583173 MTIF3Q9H2K0 278 aaKnown RBP23.94■■□□□ 1.42
TSEN54-208ENST00000583173 CUEDC2Q9H467 287 aa23.94■■□□□ 1.42
TSEN54-208ENST00000583173 CHST12Q9NRB3 414 aa23.94■■□□□ 1.42
TSEN54-208ENST00000583173 RGS18Q9NS28 235 aa23.94■■□□□ 1.42
TSEN54-208ENST00000583173 LAMA3Q16787 3333 aa23.93■■□□□ 1.42
TSEN54-208ENST00000583173 ADGRA3Q8IWK6 1321 aa23.93■■□□□ 1.42
TSEN54-208ENST00000583173 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.93■■□□□ 1.42
TSEN54-208ENST00000583173 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.93■■□□□ 1.42
TSEN54-208ENST00000583173 PFKFB1P16118 471 aa23.93■■□□□ 1.42
TSEN54-208ENST00000583173 PHKA2P46019 1235 aa23.93■■□□□ 1.42
TSEN54-208ENST00000583173 NPTX2P47972 431 aa23.93■■□□□ 1.42
TSEN54-208ENST00000583173 RAD51AP2Q09MP3 1159 aa23.93■■□□□ 1.42
TSEN54-208ENST00000583173 PPP2R5AQ15172 486 aa23.93■■□□□ 1.42
TSEN54-208ENST00000583173 PCBP1Q15365 356 aaKnown RBP eCLIP23.93■■□□□ 1.42
TSEN54-208ENST00000583173 CLEC17AQ6ZS10 378 aa23.93■■□□□ 1.42
TSEN54-208ENST00000583173 SPIRE2Q8WWL2 714 aa23.93■■□□□ 1.42
TSEN54-208ENST00000583173 KCNN1Q92952 543 aa23.93■■□□□ 1.42
TSEN54-208ENST00000583173 TOP1MTQ969P6 601 aa23.93■■□□□ 1.42
TSEN54-208ENST00000583173 DHX58Q96C10 678 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms