RNA–Protein interactions for RNA: ENST00000582490.5

NDEL1-213, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-213ENST00000582490 DUSP12Q9UNI6 340 aa6.94□□□□□ -1.3
NDEL1-213ENST00000582490 RWDD3Q9Y3V2 267 aa6.94□□□□□ -1.3
NDEL1-213ENST00000582490 CDY2AQ9Y6F7 541 aa6.94□□□□□ -1.3
NDEL1-213ENST00000582490 GON4LQ3T8J9 2241 aa6.94□□□□□ -1.3
NDEL1-213ENST00000582490 MYO18BQ8IUG5 2567 aa6.94□□□□□ -1.3
NDEL1-213ENST00000582490 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.93□□□□□ -1.3
NDEL1-213ENST00000582490 TBKBP1A7MCY6 615 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 CCER2I3L3R5 266 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 OPLAHO14841 1288 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 PPFIA4O75335 1185 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 GOLGA8HP0CJ92 632 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 TSPY3P0CV98 308 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 TSPY8P0CW00 308 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 FGFR1P11362 822 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 ZSCAN20P17040 1043 aaPredicted RBP6.93□□□□□ -1.3
NDEL1-213ENST00000582490 JUNDP17535 347 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 UBA1P22314 1058 aaKnown RBP6.93□□□□□ -1.3
NDEL1-213ENST00000582490 SKOR1P84550 965 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 RING1Q06587 406 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 NFX1Q12986 1120 aaKnown RBP6.93□□□□□ -1.3
NDEL1-213ENST00000582490 TDGQ13569 410 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 LAMC2Q13753 1193 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 TTF1Q15361 905 aaPredicted RBP6.93□□□□□ -1.3
NDEL1-213ENST00000582490 LONRF3Q496Y0 759 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 NAALADL2Q58DX5 795 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 MARCH8Q5T0T0 291 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 LRSAM1Q6UWE0 723 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 CACTIN-AS1Q8N1I8 211 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 LSM14AQ8ND56 463 aaKnown RBP6.93□□□□□ -1.3
NDEL1-213ENST00000582490 DNERQ8NFT8 737 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 RHPN1Q8TCX5 695 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 RASGRP4Q8TDF6 673 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 HPS1Q92902 700 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 PPP2R3CQ969Q6 453 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 NCAPGQ9BPX3 1015 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 TCF25Q9BQ70 676 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 RTKNQ9BST9 563 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 CCDC94Q9BW85 323 aaPredicted RBP6.93□□□□□ -1.3
NDEL1-213ENST00000582490 JADE2Q9NQC1 790 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 ARPP21Q9UBL0 812 aaPredicted RBP6.93□□□□□ -1.3
NDEL1-213ENST00000582490 STX8Q9UNK0 236 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 SMG5Q9UPR3 1016 aaKnown RBP6.93□□□□□ -1.3
NDEL1-213ENST00000582490 FRMD4BQ9Y2L6 1034 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 ASCC3Q8N3C0 2202 aaKnown RBP6.93□□□□□ -1.3
NDEL1-213ENST00000582490 PLIN4Q96Q06 1357 aa6.93□□□□□ -1.3
NDEL1-213ENST00000582490 SHROOM3Q8TF72 1996 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 C2orf71A6NGG8 1288 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 SOBPA7XYQ1 873 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 NT5C1B-RDH14C9J2C7 533 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 SLC30A4O14863 429 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 PROS1P07225 676 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 NR3C2P08235 984 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 MYCLP12524 364 aaPredicted RBP6.92□□□□□ -1.3
NDEL1-213ENST00000582490 SNRPBP14678 240 aaKnown RBP6.92□□□□□ -1.3
NDEL1-213ENST00000582490 CD72P21854 359 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 PEX19P40855 299 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 CSTF1Q05048 431 aaKnown RBP6.92□□□□□ -1.3
NDEL1-213ENST00000582490 TBC1D8BQ0IIM8 1120 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 UBE3CQ15386 1083 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 HSP90B2PQ58FF3 399 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 SPOUT1Q5T280 376 aaKnown RBP6.92□□□□□ -1.3
NDEL1-213ENST00000582490 TSHZ3Q63HK5 1081 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 CREBRFQ8IUR6 639 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 AMOTL1Q8IY63 956 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 THNSL1Q8IYQ7 743 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 ZNF513Q8N8E2 541 aaPredicted RBP6.92□□□□□ -1.3
NDEL1-213ENST00000582490 KRI1Q8N9T8 703 aaKnown RBP6.92□□□□□ -1.3
NDEL1-213ENST00000582490 GPR152Q8TDT2 470 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 FRAT1Q92837 279 aaPredicted RBP6.92□□□□□ -1.3
NDEL1-213ENST00000582490 APBB2Q92870 758 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 MYADMQ96S97 322 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 RMDN3Q96TC7 470 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 KATNAL1Q9BW62 490 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 CYP26B1Q9NR63 512 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 PPP4R2Q9NY27 417 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 DBR1Q9UK59 544 aaKnown RBP6.92□□□□□ -1.3
NDEL1-213ENST00000582490 ANGPTL2Q9UKU9 493 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 PADI3Q9ULW8 664 aa6.92□□□□□ -1.3
NDEL1-213ENST00000582490 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.92□□□□□ -1.3
NDEL1-213ENST00000582490 GREB1Q4ZG55 1949 aa6.91□□□□□ -1.3
NDEL1-213ENST00000582490 MTCL1Q9Y4B5 1905 aaKnown RBP6.91□□□□□ -1.3
NDEL1-213ENST00000582490 GOLGA6CA6NDK9 693 aa6.91□□□□□ -1.3
NDEL1-213ENST00000582490 GOLGA6BA6NDN3 693 aa6.91□□□□□ -1.3
NDEL1-213ENST00000582490 GPAA1O43292 621 aa6.91□□□□□ -1.3
NDEL1-213ENST00000582490 KINO60870 393 aaKnown RBP6.91□□□□□ -1.3
NDEL1-213ENST00000582490 GOLGA6DP0CG33 693 aa6.91□□□□□ -1.3
NDEL1-213ENST00000582490 HOXB8P17481 243 aaPredicted RBP6.91□□□□□ -1.3
NDEL1-213ENST00000582490 SP4Q02446 784 aa6.91□□□□□ -1.3
NDEL1-213ENST00000582490 WTAPQ15007 396 aa6.91□□□□□ -1.3
NDEL1-213ENST00000582490 STXBP2Q15833 593 aa6.91□□□□□ -1.3
NDEL1-213ENST00000582490 SOWAHCQ53LP3 525 aaPredicted RBP6.91□□□□□ -1.3
NDEL1-213ENST00000582490 ZNF280DQ6N043 979 aa6.91□□□□□ -1.3
NDEL1-213ENST00000582490 KIAA1841Q6NSI8 718 aa6.91□□□□□ -1.3
NDEL1-213ENST00000582490 CEP85Q6P2H3 762 aa6.91□□□□□ -1.3
NDEL1-213ENST00000582490 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.91□□□□□ -1.3
NDEL1-213ENST00000582490 TMEM173Q86WV6 379 aaPredicted RBP6.91□□□□□ -1.3
NDEL1-213ENST00000582490 NPAS4Q8IUM7 802 aa6.91□□□□□ -1.3
NDEL1-213ENST00000582490 IFNL3Q8IZI9 196 aa6.91□□□□□ -1.3
NDEL1-213ENST00000582490 SLC44A3Q8N4M1 653 aa6.91□□□□□ -1.3
NDEL1-213ENST00000582490 SLC22A17Q8WUG5 538 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms