RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 S1PR5Q9H228 398 aa23.41■■□□□ 1.34
SNX11-207ENST00000580875 TMEM221A6NGB7 291 aa23.4■■□□□ 1.34
SNX11-207ENST00000580875 M0R296 226 aa23.4■■□□□ 1.34
SNX11-207ENST00000580875 M0R2N6 131 aa23.4■■□□□ 1.34
SNX11-207ENST00000580875 TDP2O95551 362 aa23.4■■□□□ 1.34
SNX11-207ENST00000580875 HOXB8P17481 243 aaPredicted RBP23.4■■□□□ 1.34
SNX11-207ENST00000580875 DNM2P50570 870 aa23.4■■□□□ 1.34
SNX11-207ENST00000580875 GALNT17Q6IS24 598 aa23.4■■□□□ 1.34
SNX11-207ENST00000580875 LLGL2Q6P1M3 1020 aa23.4■■□□□ 1.34
SNX11-207ENST00000580875 B3GNT9Q6UX72 402 aa23.4■■□□□ 1.34
SNX11-207ENST00000580875 BLIDQ8IZY5 108 aa23.4■■□□□ 1.34
SNX11-207ENST00000580875 FAM177A1Q8N128 213 aaPredicted RBP23.4■■□□□ 1.34
SNX11-207ENST00000580875 SLC39A11Q8N1S5 342 aa23.4■■□□□ 1.34
SNX11-207ENST00000580875 DAGLBQ8NCG7 672 aa23.4■■□□□ 1.34
SNX11-207ENST00000580875 HELQQ8TDG4 1101 aa23.4■■□□□ 1.34
SNX11-207ENST00000580875 CEP89Q96ST8 783 aa23.4■■□□□ 1.34
SNX11-207ENST00000580875 CHST12Q9NRB3 414 aa23.4■■□□□ 1.34
SNX11-207ENST00000580875 CYP46A1Q9Y6A2 500 aa23.4■■□□□ 1.34
SNX11-207ENST00000580875 WDR81Q562E7 1941 aa23.39■■□□□ 1.34
SNX11-207ENST00000580875 WDFY4Q6ZS81 3184 aa23.39■■□□□ 1.34
SNX11-207ENST00000580875 IGKV6-21A0A0C4DH24 114 aa23.39■■□□□ 1.33
SNX11-207ENST00000580875 EPB41L2O43491 1005 aaKnown RBP23.39■■□□□ 1.33
SNX11-207ENST00000580875 CSDE1O75534 798 aaKnown RBP23.39■■□□□ 1.33
SNX11-207ENST00000580875 STBD1O95210 358 aa23.39■■□□□ 1.33
SNX11-207ENST00000580875 SMC1AQ14683 1233 aaKnown RBP23.39■■□□□ 1.33
SNX11-207ENST00000580875 SYCE2Q6PIF2 218 aa23.39■■□□□ 1.33
SNX11-207ENST00000580875 MOXD1Q6UVY6 613 aa23.39■■□□□ 1.33
SNX11-207ENST00000580875 ETNPPLQ8TBG4 499 aa23.39■■□□□ 1.33
SNX11-207ENST00000580875 PBXIP1Q96AQ6 731 aa23.39■■□□□ 1.33
SNX11-207ENST00000580875 ZNF274Q96GC6 653 aaPredicted RBP23.39■■□□□ 1.33
SNX11-207ENST00000580875 MBOAT7Q96N66 472 aa23.39■■□□□ 1.33
SNX11-207ENST00000580875 TMEM150BA6NC51 233 aa23.38■■□□□ 1.33
SNX11-207ENST00000580875 EIF5BO60841 1220 aaKnown RBP23.38■■□□□ 1.33
SNX11-207ENST00000580875 SFPQP23246 707 aaKnown RBP eCLIP23.38■■□□□ 1.33
SNX11-207ENST00000580875 ALDH7A1P49419 539 aaKnown RBP23.38■■□□□ 1.33
SNX11-207ENST00000580875 MRPL43Q8N983 215 aaKnown RBP23.38■■□□□ 1.33
SNX11-207ENST00000580875 RSPH1Q8WYR4 309 aa23.38■■□□□ 1.33
SNX11-207ENST00000580875 SH2D3AQ9BRG2 576 aa23.38■■□□□ 1.33
SNX11-207ENST00000580875 TECTAO75443 2155 aa23.38■■□□□ 1.33
SNX11-207ENST00000580875 PHKA2P46019 1235 aa23.37■■□□□ 1.33
SNX11-207ENST00000580875 NONOQ15233 471 aaKnown RBP eCLIP23.37■■□□□ 1.33
SNX11-207ENST00000580875 NPY5RQ15761 445 aa23.37■■□□□ 1.33
SNX11-207ENST00000580875 CPLX2Q6PUV4 134 aaKnown RBP23.37■■□□□ 1.33
SNX11-207ENST00000580875 ZNF410Q86VK4 478 aa23.37■■□□□ 1.33
SNX11-207ENST00000580875 CASP10Q92851 521 aa23.37■■□□□ 1.33
SNX11-207ENST00000580875 TRAIPQ9BWF2 469 aa23.37■■□□□ 1.33
SNX11-207ENST00000580875 APOL5Q9BWW9 433 aa23.37■■□□□ 1.33
SNX11-207ENST00000580875 INO80BQ9C086 356 aaPredicted RBP23.37■■□□□ 1.33
SNX11-207ENST00000580875 DDX25Q9UHL0 483 aaKnown RBP23.37■■□□□ 1.33
SNX11-207ENST00000580875 ZNF318Q5VUA4 2279 aa23.36■■□□□ 1.33
SNX11-207ENST00000580875 A0A087WZ62 844 aa23.36■■□□□ 1.33
SNX11-207ENST00000580875 C2orf71A6NGG8 1288 aa23.36■■□□□ 1.33
SNX11-207ENST00000580875 DDX11L8A8MPP1 907 aa23.36■■□□□ 1.33
SNX11-207ENST00000580875 MAFO75444 373 aaPredicted RBP23.36■■□□□ 1.33
SNX11-207ENST00000580875 MRE11P49959 708 aa23.36■■□□□ 1.33
SNX11-207ENST00000580875 BCAR1P56945 870 aa23.36■■□□□ 1.33
SNX11-207ENST00000580875 PSMC5P62195 406 aa23.36■■□□□ 1.33
SNX11-207ENST00000580875 BMS1Q14692 1282 aaKnown RBP23.36■■□□□ 1.33
SNX11-207ENST00000580875 TWF2Q6IBS0 349 aaKnown RBP23.36■■□□□ 1.33
SNX11-207ENST00000580875 RHPN2Q8IUC4 686 aa23.36■■□□□ 1.33
SNX11-207ENST00000580875 FDXACB1Q9BRP7 624 aaPredicted RBP23.36■■□□□ 1.33
SNX11-207ENST00000580875 LARP6Q9BRS8 491 aaKnown RBP23.36■■□□□ 1.33
SNX11-207ENST00000580875 SUCLA2Q9P2R7 463 aaPredicted RBP23.36■■□□□ 1.33
SNX11-207ENST00000580875 HCFC2Q9Y5Z7 792 aa23.36■■□□□ 1.33
SNX11-207ENST00000580875 SKIP12755 728 aa23.35■■□□□ 1.33
SNX11-207ENST00000580875 SIGLEC14Q08ET2 396 aa23.35■■□□□ 1.33
SNX11-207ENST00000580875 TPRNQ4KMQ1 711 aa23.35■■□□□ 1.33
SNX11-207ENST00000580875 KRT25Q7Z3Z0 450 aa23.35■■□□□ 1.33
SNX11-207ENST00000580875 SUGP1Q8IWZ8 645 aaKnown RBP23.35■■□□□ 1.33
SNX11-207ENST00000580875 TMEM169Q96HH4 297 aa23.35■■□□□ 1.33
SNX11-207ENST00000580875 AIFM3Q96NN9 605 aa23.35■■□□□ 1.33
SNX11-207ENST00000580875 JPH2Q9BR39 696 aaPredicted RBP23.35■■□□□ 1.33
SNX11-207ENST00000580875 TM6SF1Q9BZW5 370 aa23.35■■□□□ 1.33
SNX11-207ENST00000580875 PIN4Q9Y237 131 aaKnown RBP23.35■■□□□ 1.33
SNX11-207ENST00000580875 CARNS1A5YM72 827 aa23.34■■□□□ 1.33
SNX11-207ENST00000580875 NT5C1B-RDH14C9J2C7 533 aa23.34■■□□□ 1.33
SNX11-207ENST00000580875 STK3Q13188 491 aa23.34■■□□□ 1.33
SNX11-207ENST00000580875 INF2Q27J81 1249 aa23.34■■□□□ 1.33
SNX11-207ENST00000580875 ANO5Q75V66 913 aa23.34■■□□□ 1.33
SNX11-207ENST00000580875 SLC37A4O43826 429 aa23.33■■□□□ 1.33
SNX11-207ENST00000580875 ZC3H11AO75152 810 aaKnown RBP eCLIP23.33■■□□□ 1.33
SNX11-207ENST00000580875 CA8P35219 290 aa23.33■■□□□ 1.33
SNX11-207ENST00000580875 RAB27AP51159 221 aa23.33■■□□□ 1.33
SNX11-207ENST00000580875 ITIH3Q06033 890 aa23.33■■□□□ 1.33
SNX11-207ENST00000580875 PTPN21Q16825 1174 aa23.33■■□□□ 1.33
SNX11-207ENST00000580875 LETM2Q2VYF4 491 aa23.33■■□□□ 1.33
SNX11-207ENST00000580875 PLA2G4FQ68DD2 849 aa23.33■■□□□ 1.33
SNX11-207ENST00000580875 CES5AQ6NT32 575 aa23.33■■□□□ 1.33
SNX11-207ENST00000580875 GLB1LQ6UWU2 654 aa23.33■■□□□ 1.33
SNX11-207ENST00000580875 CATSPER4Q7RTX7 472 aa23.33■■□□□ 1.33
SNX11-207ENST00000580875 FBXL6Q8N531 539 aa23.33■■□□□ 1.33
SNX11-207ENST00000580875 LPPQ93052 612 aa23.33■■□□□ 1.33
SNX11-207ENST00000580875 NLRP4Q96MN2 994 aa23.33■■□□□ 1.33
SNX11-207ENST00000580875 NECTIN4Q96NY8 510 aa23.33■■□□□ 1.33
SNX11-207ENST00000580875 UPF2Q9HAU5 1272 aaKnown RBP23.33■■□□□ 1.33
SNX11-207ENST00000580875 CYP26B1Q9NR63 512 aa23.33■■□□□ 1.33
SNX11-207ENST00000580875 FAM105AQ9NUU6 356 aa23.33■■□□□ 1.33
SNX11-207ENST00000580875 NR2E1Q9Y466 385 aa23.33■■□□□ 1.33
SNX11-207ENST00000580875 EML1O00423 815 aa23.32■■□□□ 1.32
SNX11-207ENST00000580875 CLASP2O75122 1294 aaKnown RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms