RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 ZNF410Q86VK4 478 aa23.83■■□□□ 1.41
CSNK1D-215ENST00000580784 C4orf19Q8IY42 314 aa23.83■■□□□ 1.41
CSNK1D-215ENST00000580784 NLRP4Q96MN2 994 aa23.83■■□□□ 1.41
CSNK1D-215ENST00000580784 PCDHA12Q9UN75 941 aa23.83■■□□□ 1.41
CSNK1D-215ENST00000580784 PCDHGC5Q9Y5F6 944 aa23.83■■□□□ 1.41
CSNK1D-215ENST00000580784 HOXA2O43364 376 aa23.82■■□□□ 1.4
CSNK1D-215ENST00000580784 FGF18O76093 207 aa23.82■■□□□ 1.4
CSNK1D-215ENST00000580784 YWHABP31946 246 aaKnown RBP23.82■■□□□ 1.4
CSNK1D-215ENST00000580784 GUCY1B3Q02153 619 aa23.82■■□□□ 1.4
CSNK1D-215ENST00000580784 ADAM15Q13444 863 aa23.82■■□□□ 1.4
CSNK1D-215ENST00000580784 ZNF598Q86UK7 904 aaKnown RBP23.82■■□□□ 1.4
CSNK1D-215ENST00000580784 CCDC83Q8IWF9 413 aa23.82■■□□□ 1.4
CSNK1D-215ENST00000580784 TPH2Q8IWU9 490 aa23.82■■□□□ 1.4
CSNK1D-215ENST00000580784 THNSL1Q8IYQ7 743 aa23.82■■□□□ 1.4
CSNK1D-215ENST00000580784 ABI1Q8IZP0 508 aa23.82■■□□□ 1.4
CSNK1D-215ENST00000580784 SLC7A3Q8WY07 619 aa23.82■■□□□ 1.4
CSNK1D-215ENST00000580784 TMEM143Q96AN5 459 aa23.82■■□□□ 1.4
CSNK1D-215ENST00000580784 INO80BQ9C086 356 aaPredicted RBP23.82■■□□□ 1.4
CSNK1D-215ENST00000580784 DHX33Q9H6R0 707 aaKnown RBP23.82■■□□□ 1.4
CSNK1D-215ENST00000580784 CHST12Q9NRB3 414 aa23.82■■□□□ 1.4
CSNK1D-215ENST00000580784 DACT1Q9NYF0 836 aa23.82■■□□□ 1.4
CSNK1D-215ENST00000580784 ARID2Q68CP9 1835 aa23.82■■□□□ 1.4
CSNK1D-215ENST00000580784 SLITRK3O94933 977 aa23.81■■□□□ 1.4
CSNK1D-215ENST00000580784 EOMESO95936 686 aa23.81■■□□□ 1.4
CSNK1D-215ENST00000580784 ATF7P17544 494 aaPredicted RBP23.81■■□□□ 1.4
CSNK1D-215ENST00000580784 SFPQP23246 707 aaKnown RBP eCLIP23.81■■□□□ 1.4
CSNK1D-215ENST00000580784 POLGP54098 1239 aaPredicted RBP23.81■■□□□ 1.4
CSNK1D-215ENST00000580784 CLUL1Q15846 466 aa23.81■■□□□ 1.4
CSNK1D-215ENST00000580784 CALCRLQ16602 461 aa23.81■■□□□ 1.4
CSNK1D-215ENST00000580784 CLLU1OSQ5K130 101 aa23.81■■□□□ 1.4
CSNK1D-215ENST00000580784 OTUD6AQ7L8S5 288 aa23.81■■□□□ 1.4
CSNK1D-215ENST00000580784 RBM23Q86U06 439 aaKnown RBP23.81■■□□□ 1.4
CSNK1D-215ENST00000580784 MICAL1Q8TDZ2 1067 aa23.81■■□□□ 1.4
CSNK1D-215ENST00000580784 PRPF31Q8WWY3 499 aaKnown RBP23.81■■□□□ 1.4
CSNK1D-215ENST00000580784 KHSRPQ92945 711 aaKnown RBP eCLIP23.81■■□□□ 1.4
CSNK1D-215ENST00000580784 EPHX3Q9H6B9 360 aa23.81■■□□□ 1.4
CSNK1D-215ENST00000580784 ZSWIM4Q9H7M6 989 aa23.81■■□□□ 1.4
CSNK1D-215ENST00000580784 BMP2KQ9NSY1 1161 aaPredicted RBP23.81■■□□□ 1.4
CSNK1D-215ENST00000580784 C5orf42Q9H799 3197 aa23.81■■□□□ 1.4
CSNK1D-215ENST00000580784 LAG3P18627 525 aa23.8■■□□□ 1.4
CSNK1D-215ENST00000580784 RFC5P40937 340 aa23.8■■□□□ 1.4
CSNK1D-215ENST00000580784 TXKP42681 527 aa23.8■■□□□ 1.4
CSNK1D-215ENST00000580784 ERVFC1P60507 584 aa23.8■■□□□ 1.4
CSNK1D-215ENST00000580784 UBE3AQ05086 875 aa23.8■■□□□ 1.4
CSNK1D-215ENST00000580784 XKR9Q5GH70 373 aa23.8■■□□□ 1.4
CSNK1D-215ENST00000580784 EXOC8Q8IYI6 725 aa23.8■■□□□ 1.4
CSNK1D-215ENST00000580784 HELQQ8TDG4 1101 aa23.8■■□□□ 1.4
CSNK1D-215ENST00000580784 PPP2R3CQ969Q6 453 aa23.8■■□□□ 1.4
CSNK1D-215ENST00000580784 KIF2CQ99661 725 aa23.8■■□□□ 1.4
CSNK1D-215ENST00000580784 EIF2AK1Q9BQI3 630 aaKnown RBP23.8■■□□□ 1.4
CSNK1D-215ENST00000580784 TTC12Q9H892 705 aaPredicted RBP23.8■■□□□ 1.4
CSNK1D-215ENST00000580784 IFT122Q9HBG6 1241 aa23.8■■□□□ 1.4
CSNK1D-215ENST00000580784 PPME1Q9Y570 386 aa23.8■■□□□ 1.4
CSNK1D-215ENST00000580784 COL4A3BPQ9Y5P4 624 aa23.8■■□□□ 1.4
CSNK1D-215ENST00000580784 NEMFO60524 1076 aa23.79■■□□□ 1.4
CSNK1D-215ENST00000580784 TBX10O75333 385 aa23.79■■□□□ 1.4
CSNK1D-215ENST00000580784 SRGAP2CP0DJJ0 459 aa23.79■■□□□ 1.4
CSNK1D-215ENST00000580784 PBX3P40426 434 aa23.79■■□□□ 1.4
CSNK1D-215ENST00000580784 PHKA2P46019 1235 aa23.79■■□□□ 1.4
CSNK1D-215ENST00000580784 NRIP1P48552 1158 aa23.79■■□□□ 1.4
CSNK1D-215ENST00000580784 CSPP1Q1MSJ5 1256 aa23.79■■□□□ 1.4
CSNK1D-215ENST00000580784 C8orf34Q49A92 452 aa23.79■■□□□ 1.4
CSNK1D-215ENST00000580784 CATSPER4Q7RTX7 472 aa23.79■■□□□ 1.4
CSNK1D-215ENST00000580784 GJD3Q8N144 294 aa23.79■■□□□ 1.4
CSNK1D-215ENST00000580784 HSD17B14Q9BPX1 270 aa23.79■■□□□ 1.4
CSNK1D-215ENST00000580784 TLR9Q9NR96 1032 aa23.79■■□□□ 1.4
CSNK1D-215ENST00000580784 PIN4Q9Y237 131 aaKnown RBP23.79■■□□□ 1.4
CSNK1D-215ENST00000580784 ATP2B1P20020 1258 aa23.78■■□□□ 1.4
CSNK1D-215ENST00000580784 LONRF3Q496Y0 759 aa23.78■■□□□ 1.4
CSNK1D-215ENST00000580784 TWF2Q6IBS0 349 aaKnown RBP23.78■■□□□ 1.4
CSNK1D-215ENST00000580784 KCNT2Q6UVM3 1135 aa23.78■■□□□ 1.4
CSNK1D-215ENST00000580784 LRRC43Q8N309 656 aa23.78■■□□□ 1.4
CSNK1D-215ENST00000580784 PSPC1Q8WXF1 523 aaKnown RBP23.78■■□□□ 1.4
CSNK1D-215ENST00000580784 MTMR9Q96QG7 549 aa23.78■■□□□ 1.4
CSNK1D-215ENST00000580784 LLPHQ9BRT6 129 aaKnown RBP23.78■■□□□ 1.4
CSNK1D-215ENST00000580784 TRAIPQ9BWF2 469 aa23.78■■□□□ 1.4
CSNK1D-215ENST00000580784 SSTR3P32745 418 aaPredicted RBP23.77■■□□□ 1.4
CSNK1D-215ENST00000580784 LAMTOR4Q0VGL1 99 aa23.77■■□□□ 1.4
CSNK1D-215ENST00000580784 EMC2Q15006 297 aa23.77■■□□□ 1.4
CSNK1D-215ENST00000580784 SAFBQ15424 915 aaKnown RBP eCLIP23.77■■□□□ 1.4
CSNK1D-215ENST00000580784 EFHBQ8N7U6 833 aa23.77■■□□□ 1.4
CSNK1D-215ENST00000580784 LPPQ93052 612 aa23.77■■□□□ 1.4
CSNK1D-215ENST00000580784 ZNF558Q96NG5 402 aa23.77■■□□□ 1.4
CSNK1D-215ENST00000580784 TMEM60Q9H2L4 133 aa23.77■■□□□ 1.4
CSNK1D-215ENST00000580784 TLE6Q9H808 572 aa23.77■■□□□ 1.4
CSNK1D-215ENST00000580784 FAM50BQ9Y247 325 aa23.77■■□□□ 1.4
CSNK1D-215ENST00000580784 PER2O15055 1255 aa23.76■■□□□ 1.39
CSNK1D-215ENST00000580784 NDUFV1P49821 464 aa23.76■■□□□ 1.39
CSNK1D-215ENST00000580784 PLCB3Q01970 1234 aa23.76■■□□□ 1.39
CSNK1D-215ENST00000580784 TCP11Q8WWU5 503 aa23.76■■□□□ 1.39
CSNK1D-215ENST00000580784 MRPS27Q92552 414 aaKnown RBP23.76■■□□□ 1.39
CSNK1D-215ENST00000580784 C8orf76Q96K31 380 aa23.76■■□□□ 1.39
CSNK1D-215ENST00000580784 C1QTNF1Q9BXJ1 281 aa23.76■■□□□ 1.39
CSNK1D-215ENST00000580784 MINDY3Q9H8M7 445 aa23.76■■□□□ 1.39
CSNK1D-215ENST00000580784 CLEC1BQ9P126 229 aa23.76■■□□□ 1.39
CSNK1D-215ENST00000580784 A0A087WWV3 80 aa23.75■■□□□ 1.39
CSNK1D-215ENST00000580784 FSCN2O14926 492 aa23.75■■□□□ 1.39
CSNK1D-215ENST00000580784 MBTPS2O43462 519 aa23.75■■□□□ 1.39
CSNK1D-215ENST00000580784 LYPLA2O95372 231 aa23.75■■□□□ 1.39
CSNK1D-215ENST00000580784 MCM7P33993 719 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms