RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 LRRC43Q8N309 656 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 ENAHQ8N8S7 591 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 GLG1Q92896 1179 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 GPATCH3Q96I76 525 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 MYADMQ96S97 322 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 PRKD2Q9BZL6 878 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 KAT14Q9H8E8 782 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 EPS15L1Q9UBC2 864 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 FBXO4Q9UKT5 387 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 MTF2Q9Y483 593 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 PCDHGA2Q9Y5H1 932 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 TTC41PQ6P2S7 1318 aa8.83□□□□□ -1
SMARCE1-217ENST00000580654 NBEAQ8NFP9 2946 aa8.83□□□□□ -1
SMARCE1-217ENST00000580654 CTSAP10619 480 aa8.83□□□□□ -1
SMARCE1-217ENST00000580654 PCP11498 1178 aaKnown RBP8.83□□□□□ -1
SMARCE1-217ENST00000580654 CSTF1Q05048 431 aaKnown RBP8.83□□□□□ -1
SMARCE1-217ENST00000580654 PCNX4Q63HM2 1172 aa8.83□□□□□ -1
SMARCE1-217ENST00000580654 DCLRE1AQ6PJP8 1040 aa8.83□□□□□ -1
SMARCE1-217ENST00000580654 MTHFD1LQ6UB35 978 aa8.83□□□□□ -1
SMARCE1-217ENST00000580654 FAM43BQ6ZT52 329 aaPredicted RBP8.83□□□□□ -1
SMARCE1-217ENST00000580654 KIAA0319LQ8IZA0 1049 aa8.83□□□□□ -1
SMARCE1-217ENST00000580654 NME8Q8N427 588 aa8.83□□□□□ -1
SMARCE1-217ENST00000580654 ST13P5Q8NFI4 369 aaPredicted RBP8.83□□□□□ -1
SMARCE1-217ENST00000580654 BCL7CQ8WUZ0 217 aaPredicted RBP8.83□□□□□ -1
SMARCE1-217ENST00000580654 ESR2Q92731 530 aa8.83□□□□□ -1
SMARCE1-217ENST00000580654 FAM227BQ96M60 508 aa8.83□□□□□ -1
SMARCE1-217ENST00000580654 PIGSQ96S52 555 aa8.83□□□□□ -1
SMARCE1-217ENST00000580654 VN1R3Q9BXE9 311 aa8.83□□□□□ -1
SMARCE1-217ENST00000580654 SLC2A4RGQ9NR83 387 aa8.83□□□□□ -1
SMARCE1-217ENST00000580654 SPATA6Q9NWH7 488 aaPredicted RBP8.83□□□□□ -1
SMARCE1-217ENST00000580654 MAD2L2Q9UI95 211 aa8.83□□□□□ -1
SMARCE1-217ENST00000580654 ANGPTL2Q9UKU9 493 aa8.83□□□□□ -1
SMARCE1-217ENST00000580654 DDX19BQ9UMR2 479 aa8.83□□□□□ -1
SMARCE1-217ENST00000580654 GINS2Q9Y248 185 aa8.83□□□□□ -1
SMARCE1-217ENST00000580654 A0A0D9SFI3 127 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 PALM3A6NDB9 673 aaPredicted RBP8.82□□□□□ -1
SMARCE1-217ENST00000580654 KLRF2D3W0D1 207 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 CYTH3O43739 400 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 ITGB5P18084 799 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 GBP2P32456 591 aaPredicted RBP8.82□□□□□ -1
SMARCE1-217ENST00000580654 CLCN4P51793 760 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 BCAR1P56945 870 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 SHC2P98077 582 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 SPEM2Q0P670 501 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 PTPN14Q15678 1187 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 N4BP2L1Q5TBK1 243 aaPredicted RBP8.82□□□□□ -1
SMARCE1-217ENST00000580654 TSSK4Q6SA08 328 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 C15orf39Q6ZRI6 1047 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 ZNF589Q86UQ0 364 aaPredicted RBP8.82□□□□□ -1
SMARCE1-217ENST00000580654 ECHDC2Q86YB7 292 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 HOMER1Q86YM7 354 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 GIMAP8Q8ND71 665 aaPredicted RBP8.82□□□□□ -1
SMARCE1-217ENST00000580654 NETO1Q8TDF5 533 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 ATRIPQ8WXE1 791 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 SECISBP2LQ93073 1101 aaKnown RBP8.82□□□□□ -1
SMARCE1-217ENST00000580654 ZSCAN10Q96SZ4 725 aaPredicted RBP8.82□□□□□ -1
SMARCE1-217ENST00000580654 PPP1R16BQ96T49 567 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 OSMRQ99650 979 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 DDX23Q9BUQ8 820 aaKnown RBP8.82□□□□□ -1
SMARCE1-217ENST00000580654 DCTPP1Q9H773 170 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 WDR6Q9NNW5 1121 aaKnown RBP8.82□□□□□ -1
SMARCE1-217ENST00000580654 HELLSQ9NRZ9 838 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 ZSCAN32Q9NX65 697 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 PKD2L1Q9P0L9 805 aa8.82□□□□□ -1
SMARCE1-217ENST00000580654 RALGAPA1Q6GYQ0 2036 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.81□□□□□ -1
SMARCE1-217ENST00000580654 B4E1Z4 1266 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 ANHXE9PGG2 379 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 GPR182O15218 404 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 HOXA2O43364 376 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 LAMTOR5O43504 91 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 TBC1D4O60343 1298 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 GDF9O60383 454 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 PROS1P07225 676 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 KLRC1P26715 233 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 HTR4Q13639 388 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 GIT2Q14161 759 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 NONOQ15233 471 aaKnown RBP eCLIP8.81□□□□□ -1
SMARCE1-217ENST00000580654 USP17L6PQ6QN14 398 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 DDX53Q86TM3 631 aaKnown RBP8.81□□□□□ -1
SMARCE1-217ENST00000580654 ZNF598Q86UK7 904 aaKnown RBP8.81□□□□□ -1
SMARCE1-217ENST00000580654 NLRX1Q86UT6 975 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 CMASQ8NFW8 434 aaPredicted RBP8.81□□□□□ -1
SMARCE1-217ENST00000580654 HELQQ8TDG4 1101 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 NXPE3Q969Y0 559 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 GPRASP2Q96D09 838 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 TMEM169Q96HH4 297 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 KLHL5Q96PQ7 755 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 RPP25Q9BUL9 199 aaKnown RBP8.81□□□□□ -1
SMARCE1-217ENST00000580654 RIOX1Q9H6W3 641 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 TSR3Q9UJK0 312 aaKnown RBP8.81□□□□□ -1
SMARCE1-217ENST00000580654 V9GY48 417 aaPredicted RBP8.81□□□□□ -1
SMARCE1-217ENST00000580654 MTCL1Q9Y4B5 1905 aaKnown RBP8.81□□□□□ -1
SMARCE1-217ENST00000580654 DOCK6Q96HP0 2047 aa8.81□□□□□ -1
SMARCE1-217ENST00000580654 CLUHO75153 1309 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 DSPP15924 2871 aaKnown RBP8.8□□□□□ -1
SMARCE1-217ENST00000580654 KANSL1LA0AUZ9 987 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 ZBTB42B2RXF5 422 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 MEIS2O14770 477 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 LILRB3O75022 631 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms