RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 UBA7P41226 1012 aa18.23■□□□□ 0.51
IFT20-210ENST00000580357 KSR1Q8IVT5 923 aa18.23■□□□□ 0.51
IFT20-210ENST00000580357 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.23■□□□□ 0.51
IFT20-210ENST00000580357 CRIPAKQ8N1N5 446 aa18.23■□□□□ 0.51
IFT20-210ENST00000580357 RNF149Q8NC42 400 aa18.23■□□□□ 0.51
IFT20-210ENST00000580357 CALML4Q96GE6 196 aa18.23■□□□□ 0.51
IFT20-210ENST00000580357 ZNF668Q96K58 619 aaPredicted RBP18.23■□□□□ 0.51
IFT20-210ENST00000580357 GUCD1Q96NT3 240 aa18.23■□□□□ 0.51
IFT20-210ENST00000580357 TRAIPQ9BWF2 469 aa18.23■□□□□ 0.51
IFT20-210ENST00000580357 NFKBIZQ9BYH8 718 aa18.23■□□□□ 0.51
IFT20-210ENST00000580357 KCNG1Q9UIX4 513 aa18.23■□□□□ 0.51
IFT20-210ENST00000580357 HOXA2O43364 376 aa18.22■□□□□ 0.51
IFT20-210ENST00000580357 MGEA5O60502 916 aa18.22■□□□□ 0.51
IFT20-210ENST00000580357 EOMESO95936 686 aa18.22■□□□□ 0.51
IFT20-210ENST00000580357 CDC25AP30304 524 aa18.22■□□□□ 0.51
IFT20-210ENST00000580357 AXLP30530 894 aa18.22■□□□□ 0.51
IFT20-210ENST00000580357 PTENP60484 403 aa18.22■□□□□ 0.51
IFT20-210ENST00000580357 ERVK-21P61565 698 aa18.22■□□□□ 0.51
IFT20-210ENST00000580357 ECM1Q16610 540 aa18.22■□□□□ 0.51
IFT20-210ENST00000580357 ATL3Q6DD88 541 aa18.22■□□□□ 0.51
IFT20-210ENST00000580357 CATSPER4Q7RTX7 472 aa18.22■□□□□ 0.51
IFT20-210ENST00000580357 IFNLR1Q8IU57 520 aaPredicted RBP18.22■□□□□ 0.51
IFT20-210ENST00000580357 FIBCD1Q8N539 461 aa18.22■□□□□ 0.51
IFT20-210ENST00000580357 LINC01599Q8WXQ3 324 aa18.22■□□□□ 0.51
IFT20-210ENST00000580357 RSPH1Q8WYR4 309 aa18.22■□□□□ 0.51
IFT20-210ENST00000580357 ZNF689Q96CS4 500 aaPredicted RBP18.22■□□□□ 0.51
IFT20-210ENST00000580357 MMTAG2Q9BU76 263 aaKnown RBP18.22■□□□□ 0.51
IFT20-210ENST00000580357 TIPINQ9BVW5 301 aa18.22■□□□□ 0.51
IFT20-210ENST00000580357 BHMT2Q9H2M3 363 aa18.22■□□□□ 0.51
IFT20-210ENST00000580357 TMEM161AQ9NX61 479 aa18.22■□□□□ 0.51
IFT20-210ENST00000580357 RWDD3Q9Y3V2 267 aa18.22■□□□□ 0.51
IFT20-210ENST00000580357 CLIC4Q9Y696 253 aa18.22■□□□□ 0.51
IFT20-210ENST00000580357 SIP14410 1827 aa18.21■□□□□ 0.51
IFT20-210ENST00000580357 A0A0U1RQF3 1178 aa18.21■□□□□ 0.51
IFT20-210ENST00000580357 LINC01553A4QN01 128 aa18.21■□□□□ 0.51
IFT20-210ENST00000580357 ZSCAN22P10073 491 aaPredicted RBP18.21■□□□□ 0.51
IFT20-210ENST00000580357 SLC39A14Q15043 492 aa18.21■□□□□ 0.51
IFT20-210ENST00000580357 PPP2R5AQ15172 486 aa18.21■□□□□ 0.51
IFT20-210ENST00000580357 PTPAQ15257 358 aa18.21■□□□□ 0.51
IFT20-210ENST00000580357 FAM102BQ5T8I3 360 aa18.21■□□□□ 0.51
IFT20-210ENST00000580357 CABP7Q86V35 215 aa18.21■□□□□ 0.51
IFT20-210ENST00000580357 KIFAP3Q92845 792 aa18.21■□□□□ 0.51
IFT20-210ENST00000580357 IFT74Q96LB3 600 aa18.21■□□□□ 0.51
IFT20-210ENST00000580357 POLR3FQ9H1D9 316 aaPredicted RBP18.21■□□□□ 0.51
IFT20-210ENST00000580357 PRDM12Q9H4Q4 367 aa18.21■□□□□ 0.51
IFT20-210ENST00000580357 BMP2KQ9NSY1 1161 aaPredicted RBP18.21■□□□□ 0.51
IFT20-210ENST00000580357 SRPRBQ9Y5M8 271 aaKnown RBP18.21■□□□□ 0.51
IFT20-210ENST00000580357 TTC3P53804 2025 aa18.21■□□□□ 0.51
IFT20-210ENST00000580357 LOXHD1Q8IVV2 1947 aa18.21■□□□□ 0.51
IFT20-210ENST00000580357 LCHNA4D1U4 455 aa18.2■□□□□ 0.5
IFT20-210ENST00000580357 PP2D1A8MPX8 630 aa18.2■□□□□ 0.5
IFT20-210ENST00000580357 CMTR2Q8IYT2 770 aaKnown RBP18.2■□□□□ 0.5
IFT20-210ENST00000580357 MYLIPQ8WY64 445 aa18.2■□□□□ 0.5
IFT20-210ENST00000580357 C2orf40Q9H1Z8 148 aa18.2■□□□□ 0.5
IFT20-210ENST00000580357 KCND2Q9NZV8 630 aa18.2■□□□□ 0.5
IFT20-210ENST00000580357 LAMA2P24043 3122 aaKnown RBP18.2■□□□□ 0.5
IFT20-210ENST00000580357 E9PMD0 336 aa18.19■□□□□ 0.5
IFT20-210ENST00000580357 CSDE1O75534 798 aaKnown RBP18.19■□□□□ 0.5
IFT20-210ENST00000580357 ERLIN2O94905 339 aa18.19■□□□□ 0.5
IFT20-210ENST00000580357 RB1P06400 928 aa18.19■□□□□ 0.5
IFT20-210ENST00000580357 FOSL2P15408 326 aa18.19■□□□□ 0.5
IFT20-210ENST00000580357 POU3F3P20264 500 aaPredicted RBP18.19■□□□□ 0.5
IFT20-210ENST00000580357 FGFR4P22455 802 aa18.19■□□□□ 0.5
IFT20-210ENST00000580357 GLRA2P23416 452 aa18.19■□□□□ 0.5
IFT20-210ENST00000580357 RAB27AP51159 221 aa18.19■□□□□ 0.5
IFT20-210ENST00000580357 BTG3Q14201 252 aaPredicted RBP18.19■□□□□ 0.5
IFT20-210ENST00000580357 ZRSR1Q15695 479 aaKnown RBP18.19■□□□□ 0.5
IFT20-210ENST00000580357 MAEAQ7L5Y9 396 aa18.19■□□□□ 0.5
IFT20-210ENST00000580357 ECHDC2Q86YB7 292 aa18.19■□□□□ 0.5
IFT20-210ENST00000580357 SYT2Q8N9I0 419 aaPredicted RBP18.19■□□□□ 0.5
IFT20-210ENST00000580357 SPRYD3Q8NCJ5 442 aa18.19■□□□□ 0.5
IFT20-210ENST00000580357 ARNTL2Q8WYA1 636 aa18.19■□□□□ 0.5
IFT20-210ENST00000580357 CCSER1Q9C0I3 900 aa18.19■□□□□ 0.5
IFT20-210ENST00000580357 C17orf75Q9HAS0 396 aa18.19■□□□□ 0.5
IFT20-210ENST00000580357 LMCD1Q9NZU5 365 aa18.19■□□□□ 0.5
IFT20-210ENST00000580357 UNC80Q8N2C7 3258 aa18.19■□□□□ 0.5
IFT20-210ENST00000580357 INO80B-WBP1J3KQ70 363 aa18.18■□□□□ 0.5
IFT20-210ENST00000580357 ZNF623O75123 536 aa18.18■□□□□ 0.5
IFT20-210ENST00000580357 NAMPTP43490 491 aa18.18■□□□□ 0.5
IFT20-210ENST00000580357 NASPP49321 788 aaPredicted RBP18.18■□□□□ 0.5
IFT20-210ENST00000580357 GRB10Q13322 594 aa18.18■□□□□ 0.5
IFT20-210ENST00000580357 CAPSQ13938 189 aa18.18■□□□□ 0.5
IFT20-210ENST00000580357 TWF2Q6IBS0 349 aaKnown RBP18.18■□□□□ 0.5
IFT20-210ENST00000580357 FAM173BQ6P4H8 233 aa18.18■□□□□ 0.5
IFT20-210ENST00000580357 ZBTB8OSQ8IWT0 167 aa18.18■□□□□ 0.5
IFT20-210ENST00000580357 CNNM3Q8NE01 707 aa18.18■□□□□ 0.5
IFT20-210ENST00000580357 ASAP3Q8TDY4 903 aa18.18■□□□□ 0.5
IFT20-210ENST00000580357 CLP1Q92989 425 aaKnown RBP18.18■□□□□ 0.5
IFT20-210ENST00000580357 DRC1Q96MC2 740 aa18.18■□□□□ 0.5
IFT20-210ENST00000580357 USP28Q96RU2 1077 aa18.18■□□□□ 0.5
IFT20-210ENST00000580357 AGPAT5Q9NUQ2 364 aa18.18■□□□□ 0.5
IFT20-210ENST00000580357 CCDC39Q9UFE4 941 aa18.18■□□□□ 0.5
IFT20-210ENST00000580357 CFAP45Q9UL16 551 aa18.18■□□□□ 0.5
IFT20-210ENST00000580357 PIN4Q9Y237 131 aaKnown RBP18.18■□□□□ 0.5
IFT20-210ENST00000580357 ADGRA3Q8IWK6 1321 aa18.18■□□□□ 0.5
IFT20-210ENST00000580357 LRRIQ4A6NIV6 560 aa18.17■□□□□ 0.5
IFT20-210ENST00000580357 GTPBP6O43824 516 aaPredicted RBP18.17■□□□□ 0.5
IFT20-210ENST00000580357 YEATS4O95619 227 aa18.17■□□□□ 0.5
IFT20-210ENST00000580357 F13A1P00488 732 aa18.17■□□□□ 0.5
IFT20-210ENST00000580357 MARCKSP29966 332 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms