RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 RTN4RL1Q86UN2 441 aaPredicted RBP12.13□□□□□ -0.47
NDEL1-208ENST00000580237 CATSPER3Q86XQ3 398 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 TMEM192Q8IY95 271 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 RNF149Q8NC42 400 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 NACC1Q96RE7 527 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 C11orf84Q9BUA3 381 aaPredicted RBP12.13□□□□□ -0.47
NDEL1-208ENST00000580237 FOXD4L1Q9NU39 408 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 TMEM161AQ9NX61 479 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 STK24Q9Y6E0 443 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 MYO7AQ13402 2215 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 TDRD15B5MCY1 1934 aaKnown RBP12.12□□□□□ -0.47
NDEL1-208ENST00000580237 CHD9Q3L8U1 2897 aa12.12□□□□□ -0.47
NDEL1-208ENST00000580237 TBKBP1A7MCY6 615 aa12.12□□□□□ -0.47
NDEL1-208ENST00000580237 C9IYK1 514 aa12.12□□□□□ -0.47
NDEL1-208ENST00000580237 ASAP2O43150 1006 aa12.12□□□□□ -0.47
NDEL1-208ENST00000580237 CSPG5O95196 566 aa12.12□□□□□ -0.47
NDEL1-208ENST00000580237 FGFR1P11362 822 aa12.12□□□□□ -0.47
NDEL1-208ENST00000580237 RPA1P27694 616 aa12.12□□□□□ -0.47
NDEL1-208ENST00000580237 GATMP50440 423 aa12.12□□□□□ -0.47
NDEL1-208ENST00000580237 GPM6BQ13491 265 aa12.12□□□□□ -0.47
NDEL1-208ENST00000580237 MXD4Q14582 209 aaPredicted RBP12.12□□□□□ -0.47
NDEL1-208ENST00000580237 ZRSR1Q15695 479 aaKnown RBP12.12□□□□□ -0.47
NDEL1-208ENST00000580237 KRT79Q5XKE5 535 aa12.12□□□□□ -0.47
NDEL1-208ENST00000580237 DTHD1Q6ZMT9 781 aa12.12□□□□□ -0.47
NDEL1-208ENST00000580237 MAEAQ7L5Y9 396 aa12.12□□□□□ -0.47
NDEL1-208ENST00000580237 BRAPQ7Z569 592 aa12.12□□□□□ -0.47
NDEL1-208ENST00000580237 FERMT3Q86UX7 667 aa12.12□□□□□ -0.47
NDEL1-208ENST00000580237 MCPH1Q8NEM0 835 aa12.12□□□□□ -0.47
NDEL1-208ENST00000580237 PRPF31Q8WWY3 499 aaKnown RBP12.12□□□□□ -0.47
NDEL1-208ENST00000580237 POLR3CQ9BUI4 534 aaPredicted RBP12.12□□□□□ -0.47
NDEL1-208ENST00000580237 POLR3FQ9H1D9 316 aaPredicted RBP12.12□□□□□ -0.47
NDEL1-208ENST00000580237 RC3H2Q9HBD1 1191 aaKnown RBP12.12□□□□□ -0.47
NDEL1-208ENST00000580237 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.12□□□□□ -0.47
NDEL1-208ENST00000580237 THEGQ9P2T0 379 aa12.12□□□□□ -0.47
NDEL1-208ENST00000580237 MTCH2Q9Y6C9 303 aa12.12□□□□□ -0.47
NDEL1-208ENST00000580237 MRPL42Q9Y6G3 142 aaKnown RBP12.12□□□□□ -0.47
NDEL1-208ENST00000580237 BRWD1Q9NSI6 2320 aa12.12□□□□□ -0.47
NDEL1-208ENST00000580237 CHD7Q9P2D1 2997 aa12.12□□□□□ -0.47
NDEL1-208ENST00000580237 A0A087WWV3 80 aa12.11□□□□□ -0.47
NDEL1-208ENST00000580237 LRRIQ4A6NIV6 560 aa12.11□□□□□ -0.47
NDEL1-208ENST00000580237 INO80B-WBP1J3KQ70 363 aa12.11□□□□□ -0.47
NDEL1-208ENST00000580237 SPATA31C1P0DKV0 1188 aa12.11□□□□□ -0.47
NDEL1-208ENST00000580237 XRCC6P12956 609 aaKnown RBP eCLIP12.11□□□□□ -0.47
NDEL1-208ENST00000580237 PRPHP41219 470 aa12.11□□□□□ -0.47
NDEL1-208ENST00000580237 RAB27AP51159 221 aa12.11□□□□□ -0.47
NDEL1-208ENST00000580237 ATP2C1P98194 919 aaPredicted RBP12.11□□□□□ -0.47
NDEL1-208ENST00000580237 DSC3Q14574 896 aa12.11□□□□□ -0.47
NDEL1-208ENST00000580237 TIGD5Q53EQ6 642 aa12.11□□□□□ -0.47
NDEL1-208ENST00000580237 SRGAP1Q7Z6B7 1085 aa12.11□□□□□ -0.47
NDEL1-208ENST00000580237 LRRC43Q8N309 656 aa12.11□□□□□ -0.47
NDEL1-208ENST00000580237 ZNF689Q96CS4 500 aaPredicted RBP12.11□□□□□ -0.47
NDEL1-208ENST00000580237 CDK5RAP3Q96JB5 506 aa12.11□□□□□ -0.47
NDEL1-208ENST00000580237 ELAC1Q9H777 363 aaKnown RBP12.11□□□□□ -0.47
NDEL1-208ENST00000580237 XPNPEP1Q9NQW7 623 aa12.11□□□□□ -0.47
NDEL1-208ENST00000580237 DDX19AQ9NUU7 478 aaKnown RBP12.11□□□□□ -0.47
NDEL1-208ENST00000580237 DBR1Q9UK59 544 aaKnown RBP12.11□□□□□ -0.47
NDEL1-208ENST00000580237 COL6A3P12111 3177 aa12.11□□□□□ -0.47
NDEL1-208ENST00000580237 VWA3AA6NCI4 1184 aa12.1□□□□□ -0.47
NDEL1-208ENST00000580237 H3BNC9 293 aa12.1□□□□□ -0.47
NDEL1-208ENST00000580237 LPXNO60711 386 aa12.1□□□□□ -0.47
NDEL1-208ENST00000580237 BMP15O95972 392 aa12.1□□□□□ -0.47
NDEL1-208ENST00000580237 SKIP12755 728 aa12.1□□□□□ -0.47
NDEL1-208ENST00000580237 MUTP22033 750 aa12.1□□□□□ -0.47
NDEL1-208ENST00000580237 NCBP1Q09161 790 aaKnown RBP12.1□□□□□ -0.47
NDEL1-208ENST00000580237 TMEM132AQ24JP5 1023 aa12.1□□□□□ -0.47
NDEL1-208ENST00000580237 FAM102BQ5T8I3 360 aa12.1□□□□□ -0.47
NDEL1-208ENST00000580237 PADI6Q6TGC4 694 aa12.1□□□□□ -0.47
NDEL1-208ENST00000580237 ECHDC2Q86YB7 292 aa12.1□□□□□ -0.47
NDEL1-208ENST00000580237 C4orf32Q8N8J7 132 aa12.1□□□□□ -0.47
NDEL1-208ENST00000580237 RASSF8Q8NHQ8 419 aa12.1□□□□□ -0.47
NDEL1-208ENST00000580237 INTS4Q96HW7 963 aaKnown RBP12.1□□□□□ -0.47
NDEL1-208ENST00000580237 TMEM117Q9H0C3 514 aa12.1□□□□□ -0.47
NDEL1-208ENST00000580237 IFT122Q9HBG6 1241 aa12.1□□□□□ -0.47
NDEL1-208ENST00000580237 CHST12Q9NRB3 414 aa12.1□□□□□ -0.47
NDEL1-208ENST00000580237 AAASQ9NRG9 546 aa12.1□□□□□ -0.47
NDEL1-208ENST00000580237 AGPAT5Q9NUQ2 364 aa12.1□□□□□ -0.47
NDEL1-208ENST00000580237 LMCD1Q9NZU5 365 aa12.1□□□□□ -0.47
NDEL1-208ENST00000580237 KIAA1024Q9UPX6 916 aa12.1□□□□□ -0.47
NDEL1-208ENST00000580237 PP2D1A8MPX8 630 aa12.09□□□□□ -0.47
NDEL1-208ENST00000580237 RB1P06400 928 aa12.09□□□□□ -0.47
NDEL1-208ENST00000580237 POU3F3P20264 500 aaPredicted RBP12.09□□□□□ -0.47
NDEL1-208ENST00000580237 BMPR1AP36894 532 aa12.09□□□□□ -0.47
NDEL1-208ENST00000580237 CAPSQ13938 189 aa12.09□□□□□ -0.47
NDEL1-208ENST00000580237 PDIA5Q14554 519 aa12.09□□□□□ -0.47
NDEL1-208ENST00000580237 ZBTB8OSQ8IWT0 167 aa12.09□□□□□ -0.47
NDEL1-208ENST00000580237 IGSF22Q8N9C0 903 aa12.09□□□□□ -0.47
NDEL1-208ENST00000580237 ASAP3Q8TDY4 903 aa12.09□□□□□ -0.47
NDEL1-208ENST00000580237 CLP1Q92989 425 aaKnown RBP12.09□□□□□ -0.47
NDEL1-208ENST00000580237 MRPL38Q96DV4 380 aaKnown RBP12.09□□□□□ -0.47
NDEL1-208ENST00000580237 PLVAPQ9BX97 442 aa12.09□□□□□ -0.47
NDEL1-208ENST00000580237 MRPL9Q9BYD2 267 aaKnown RBP12.09□□□□□ -0.47
NDEL1-208ENST00000580237 BHMT2Q9H2M3 363 aa12.09□□□□□ -0.47
NDEL1-208ENST00000580237 GPRC5CQ9NQ84 441 aa12.09□□□□□ -0.47
NDEL1-208ENST00000580237 PRDM6Q9NQX0 595 aa12.09□□□□□ -0.47
NDEL1-208ENST00000580237 FAM105AQ9NUU6 356 aa12.09□□□□□ -0.47
NDEL1-208ENST00000580237 PCDHB12Q9Y5F1 795 aa12.09□□□□□ -0.47
NDEL1-208ENST00000580237 TCF20Q9UGU0 1960 aaKnown RBP12.09□□□□□ -0.47
NDEL1-208ENST00000580237 A0A0U1RQF3 1178 aa12.08□□□□□ -0.48
NDEL1-208ENST00000580237 C5orf67F2Z3F1 127 aa12.08□□□□□ -0.48
NDEL1-208ENST00000580237 SSBP05455 408 aaKnown RBP eCLIP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms