RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 RIPOR3Q96MK2 946 aa20.14■□□□□ 0.81
MKS1-209ENST00000580127 ADAM7Q9H2U9 754 aa20.14■□□□□ 0.81
MKS1-209ENST00000580127 STK39Q9UEW8 545 aa20.14■□□□□ 0.81
MKS1-209ENST00000580127 TRIOO75962 3097 aa20.13■□□□□ 0.81
MKS1-209ENST00000580127 NID2Q14112 1375 aa20.13■□□□□ 0.81
MKS1-209ENST00000580127 CPLX1O14810 134 aa20.13■□□□□ 0.81
MKS1-209ENST00000580127 SSRP1Q08945 709 aaKnown RBP20.13■□□□□ 0.81
MKS1-209ENST00000580127 Q4G0T1 1027 aa20.13■□□□□ 0.81
MKS1-209ENST00000580127 CPLX2Q6PUV4 134 aaKnown RBP20.13■□□□□ 0.81
MKS1-209ENST00000580127 GLB1LQ6UWU2 654 aa20.13■□□□□ 0.81
MKS1-209ENST00000580127 UBALD2Q8IYN6 164 aa20.13■□□□□ 0.81
MKS1-209ENST00000580127 FAM177A1Q8N128 213 aaPredicted RBP20.13■□□□□ 0.81
MKS1-209ENST00000580127 SLC39A11Q8N1S5 342 aa20.13■□□□□ 0.81
MKS1-209ENST00000580127 APOL5Q9BWW9 433 aa20.13■□□□□ 0.81
MKS1-209ENST00000580127 TSHZ2Q9NRE2 1034 aa20.13■□□□□ 0.81
MKS1-209ENST00000580127 VPS54Q9P1Q0 977 aa20.13■□□□□ 0.81
MKS1-209ENST00000580127 SEPT9Q9UHD8 586 aaPredicted RBP20.13■□□□□ 0.81
MKS1-209ENST00000580127 SNX14Q9Y5W7 946 aa20.13■□□□□ 0.81
MKS1-209ENST00000580127 C2orf71A6NGG8 1288 aa20.12■□□□□ 0.81
MKS1-209ENST00000580127 DDX11L8A8MPP1 907 aa20.12■□□□□ 0.81
MKS1-209ENST00000580127 DKC1O60832 514 aaKnown RBP eCLIP20.12■□□□□ 0.81
MKS1-209ENST00000580127 POLGP54098 1239 aaPredicted RBP20.12■□□□□ 0.81
MKS1-209ENST00000580127 BCAR1P56945 870 aa20.12■□□□□ 0.81
MKS1-209ENST00000580127 RNASELQ05823 741 aaKnown RBP20.12■□□□□ 0.81
MKS1-209ENST00000580127 NTRK3Q16288 839 aa20.12■□□□□ 0.81
MKS1-209ENST00000580127 MTERF2Q49AM1 385 aa20.12■□□□□ 0.81
MKS1-209ENST00000580127 CLLU1OSQ5K130 101 aa20.12■□□□□ 0.81
MKS1-209ENST00000580127 ATAT1Q5SQI0 421 aa20.12■□□□□ 0.81
MKS1-209ENST00000580127 TWF2Q6IBS0 349 aaKnown RBP20.12■□□□□ 0.81
MKS1-209ENST00000580127 GALNT17Q6IS24 598 aa20.12■□□□□ 0.81
MKS1-209ENST00000580127 ZNF598Q86UK7 904 aaKnown RBP20.12■□□□□ 0.81
MKS1-209ENST00000580127 ZNF410Q86VK4 478 aa20.12■□□□□ 0.81
MKS1-209ENST00000580127 TBCKQ8TEA7 893 aa20.12■□□□□ 0.81
MKS1-209ENST00000580127 ZNF668Q96K58 619 aaPredicted RBP20.12■□□□□ 0.81
MKS1-209ENST00000580127 TRAIPQ9BWF2 469 aa20.12■□□□□ 0.81
MKS1-209ENST00000580127 UNC45AQ9H3U1 944 aa20.12■□□□□ 0.81
MKS1-209ENST00000580127 RNF19AQ9NV58 838 aa20.12■□□□□ 0.81
MKS1-209ENST00000580127 DZANK1Q9NVP4 752 aa20.12■□□□□ 0.81
MKS1-209ENST00000580127 PCDHA4Q9UN74 947 aa20.12■□□□□ 0.81
MKS1-209ENST00000580127 ZDBF2Q9HCK1 2354 aa20.11■□□□□ 0.81
MKS1-209ENST00000580127 ADAMTS3O15072 1205 aa20.11■□□□□ 0.81
MKS1-209ENST00000580127 PDIA3P30101 505 aaKnown RBP20.11■□□□□ 0.81
MKS1-209ENST00000580127 AVPR2P30518 371 aa20.11■□□□□ 0.81
MKS1-209ENST00000580127 PBX3P40426 434 aa20.11■□□□□ 0.81
MKS1-209ENST00000580127 PHKA2P46019 1235 aa20.11■□□□□ 0.81
MKS1-209ENST00000580127 RAB27AP51159 221 aa20.11■□□□□ 0.81
MKS1-209ENST00000580127 TARBP2Q15633 366 aaKnown RBP20.11■□□□□ 0.81
MKS1-209ENST00000580127 IER5LQ5T953 404 aa20.11■□□□□ 0.81
MKS1-209ENST00000580127 PLCD3Q8N3E9 789 aa20.11■□□□□ 0.81
MKS1-209ENST00000580127 PGBD4Q96DM1 585 aa20.11■□□□□ 0.81
MKS1-209ENST00000580127 AGXT2Q9BYV1 514 aa20.11■□□□□ 0.81
MKS1-209ENST00000580127 SUCLA2Q9P2R7 463 aaPredicted RBP20.11■□□□□ 0.81
MKS1-209ENST00000580127 CYP3A7-CYP3A51PA0A087WV96 503 aa20.1■□□□□ 0.81
MKS1-209ENST00000580127 CLASP2O75122 1294 aaKnown RBP20.1■□□□□ 0.81
MKS1-209ENST00000580127 PSMD10O75832 226 aa20.1■□□□□ 0.81
MKS1-209ENST00000580127 CYP3A7P24462 503 aa20.1■□□□□ 0.81
MKS1-209ENST00000580127 EVCP57679 992 aa20.1■□□□□ 0.81
MKS1-209ENST00000580127 CCT2P78371 535 aaKnown RBP20.1■□□□□ 0.81
MKS1-209ENST00000580127 MTMR3Q13615 1198 aa20.1■□□□□ 0.81
MKS1-209ENST00000580127 PPFIBP1Q86W92 1011 aa20.1■□□□□ 0.81
MKS1-209ENST00000580127 VPS52Q8N1B4 723 aa20.1■□□□□ 0.81
MKS1-209ENST00000580127 PRSS33Q8NF86 280 aa20.1■□□□□ 0.81
MKS1-209ENST00000580127 SORCS3Q9UPU3 1222 aa20.1■□□□□ 0.81
MKS1-209ENST00000580127 HCFC2Q9Y5Z7 792 aa20.1■□□□□ 0.81
MKS1-209ENST00000580127 MYO10Q9HD67 2058 aa20.1■□□□□ 0.81
MKS1-209ENST00000580127 A0A087WZ62 844 aa20.09■□□□□ 0.81
MKS1-209ENST00000580127 ZC3H11AO75152 810 aaKnown RBP eCLIP20.09■□□□□ 0.81
MKS1-209ENST00000580127 DEXIO95424 95 aa20.09■□□□□ 0.81
MKS1-209ENST00000580127 FGFR4P22455 802 aa20.09■□□□□ 0.81
MKS1-209ENST00000580127 PSMC5P62195 406 aa20.09■□□□□ 0.81
MKS1-209ENST00000580127 UGCGQ16739 394 aa20.09■□□□□ 0.81
MKS1-209ENST00000580127 NOMO2Q5JPE7 1267 aa20.09■□□□□ 0.81
MKS1-209ENST00000580127 MOXD1Q6UVY6 613 aa20.09■□□□□ 0.81
MKS1-209ENST00000580127 CATSPER4Q7RTX7 472 aa20.09■□□□□ 0.81
MKS1-209ENST00000580127 DDX53Q86TM3 631 aaKnown RBP20.09■□□□□ 0.81
MKS1-209ENST00000580127 RHPN2Q8IUC4 686 aa20.09■□□□□ 0.81
MKS1-209ENST00000580127 BLIDQ8IZY5 108 aa20.09■□□□□ 0.81
MKS1-209ENST00000580127 KREMEN2Q8NCW0 462 aa20.09■□□□□ 0.81
MKS1-209ENST00000580127 ASIC4Q96FT7 647 aa20.09■□□□□ 0.81
MKS1-209ENST00000580127 FDXACB1Q9BRP7 624 aaPredicted RBP20.09■□□□□ 0.81
MKS1-209ENST00000580127 SLKQ9H2G2 1235 aaPredicted RBP20.09■□□□□ 0.81
MKS1-209ENST00000580127 KANSL3Q9P2N6 904 aa20.09■□□□□ 0.81
MKS1-209ENST00000580127 PIN4Q9Y237 131 aaKnown RBP20.09■□□□□ 0.81
MKS1-209ENST00000580127 IRAK3Q9Y616 596 aa20.09■□□□□ 0.81
MKS1-209ENST00000580127 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.08■□□□□ 0.81
MKS1-209ENST00000580127 NT5C1B-RDH14C9J2C7 533 aa20.08■□□□□ 0.81
MKS1-209ENST00000580127 ST18O60284 1047 aa20.08■□□□□ 0.81
MKS1-209ENST00000580127 ZNF623O75123 536 aa20.08■□□□□ 0.81
MKS1-209ENST00000580127 MAFO75444 373 aaPredicted RBP20.08■□□□□ 0.81
MKS1-209ENST00000580127 CSDE1O75534 798 aaKnown RBP20.08■□□□□ 0.81
MKS1-209ENST00000580127 URGCPQ8TCY9 931 aa20.08■□□□□ 0.81
MKS1-209ENST00000580127 SLC7A3Q8WY07 619 aa20.08■□□□□ 0.81
MKS1-209ENST00000580127 ATOH1Q92858 354 aaPredicted RBP20.08■□□□□ 0.81
MKS1-209ENST00000580127 FAM193BQ96PV7 902 aaPredicted RBP20.08■□□□□ 0.81
MKS1-209ENST00000580127 PPME1Q9Y570 386 aa20.08■□□□□ 0.81
MKS1-209ENST00000580127 CYP46A1Q9Y6A2 500 aa20.08■□□□□ 0.81
MKS1-209ENST00000580127 IGKV6-21A0A0C4DH24 114 aa20.07■□□□□ 0.8
MKS1-209ENST00000580127 SPDYE4A6NLX3 237 aa20.07■□□□□ 0.8
MKS1-209ENST00000580127 MARCH6O60337 910 aa20.07■□□□□ 0.8
MKS1-209ENST00000580127 XBP1P17861 261 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms