RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 NACC1Q96RE7 527 aa29.21■■■□□ 2.27
LIMD2-208ENST00000579814 TBKBP1A7MCY6 615 aa29.2■■■□□ 2.26
LIMD2-208ENST00000579814 LAD1O00515 517 aa29.2■■■□□ 2.26
LIMD2-208ENST00000579814 HOXA2O43364 376 aa29.2■■■□□ 2.26
LIMD2-208ENST00000579814 MED24O75448 989 aa29.2■■■□□ 2.26
LIMD2-208ENST00000579814 RPA1P27694 616 aa29.2■■■□□ 2.26
LIMD2-208ENST00000579814 FXR2P51116 673 aaKnown RBP eCLIP29.2■■■□□ 2.26
LIMD2-208ENST00000579814 MXD4Q14582 209 aaPredicted RBP29.2■■■□□ 2.26
LIMD2-208ENST00000579814 CATSPER4Q7RTX7 472 aa29.2■■■□□ 2.26
LIMD2-208ENST00000579814 SRGAP1Q7Z6B7 1085 aa29.2■■■□□ 2.26
LIMD2-208ENST00000579814 FERMT3Q86UX7 667 aa29.2■■■□□ 2.26
LIMD2-208ENST00000579814 ECHDC2Q86YB7 292 aa29.2■■■□□ 2.26
LIMD2-208ENST00000579814 IFT122Q9HBG6 1241 aa29.2■■■□□ 2.26
LIMD2-208ENST00000579814 A0A087WWV3 80 aa29.19■■■□□ 2.26
LIMD2-208ENST00000579814 A0A0U1RQF3 1178 aa29.19■■■□□ 2.26
LIMD2-208ENST00000579814 DLL1O00548 723 aa29.19■■■□□ 2.26
LIMD2-208ENST00000579814 PDIA5Q14554 519 aa29.19■■■□□ 2.26
LIMD2-208ENST00000579814 HAUS3Q68CZ6 603 aa29.19■■■□□ 2.26
LIMD2-208ENST00000579814 RNF149Q8NC42 400 aa29.19■■■□□ 2.26
LIMD2-208ENST00000579814 RAB34Q9BZG1 259 aa29.19■■■□□ 2.26
LIMD2-208ENST00000579814 XPNPEP1Q9NQW7 623 aa29.19■■■□□ 2.26
LIMD2-208ENST00000579814 LRWD1Q9UFC0 647 aa29.19■■■□□ 2.26
LIMD2-208ENST00000579814 STK24Q9Y6E0 443 aa29.19■■■□□ 2.26
LIMD2-208ENST00000579814 PRRC2BQ5JSZ5 2229 aaKnown RBP29.18■■■□□ 2.26
LIMD2-208ENST00000579814 FGFR1P11362 822 aa29.18■■■□□ 2.26
LIMD2-208ENST00000579814 MRPS5P82675 430 aaKnown RBP29.18■■■□□ 2.26
LIMD2-208ENST00000579814 CUL4AQ13619 759 aa29.18■■■□□ 2.26
LIMD2-208ENST00000579814 NAALADL2Q58DX5 795 aa29.18■■■□□ 2.26
LIMD2-208ENST00000579814 LMAN2LQ9H0V9 348 aa29.18■■■□□ 2.26
LIMD2-208ENST00000579814 DBR1Q9UK59 544 aaKnown RBP29.18■■■□□ 2.26
LIMD2-208ENST00000579814 COG5Q9UP83 839 aa29.18■■■□□ 2.26
LIMD2-208ENST00000579814 PIN4Q9Y237 131 aaKnown RBP29.18■■■□□ 2.26
LIMD2-208ENST00000579814 EOMESO95936 686 aa29.17■■■□□ 2.26
LIMD2-208ENST00000579814 MUTP22033 750 aa29.17■■■□□ 2.26
LIMD2-208ENST00000579814 TFDP1Q14186 410 aa29.17■■■□□ 2.26
LIMD2-208ENST00000579814 SPOUT1Q5T280 376 aaKnown RBP29.17■■■□□ 2.26
LIMD2-208ENST00000579814 TWF2Q6IBS0 349 aaKnown RBP29.17■■■□□ 2.26
LIMD2-208ENST00000579814 ABI1Q8IZP0 508 aa29.17■■■□□ 2.26
LIMD2-208ENST00000579814 RNF169Q8NCN4 708 aa29.17■■■□□ 2.26
LIMD2-208ENST00000579814 P2RX5Q93086 422 aa29.17■■■□□ 2.26
LIMD2-208ENST00000579814 TMEM117Q9H0C3 514 aa29.17■■■□□ 2.26
LIMD2-208ENST00000579814 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.17■■■□□ 2.26
LIMD2-208ENST00000579814 AAASQ9NRG9 546 aa29.17■■■□□ 2.26
LIMD2-208ENST00000579814 EYSQ5T1H1 3165 aa29.17■■■□□ 2.26
LIMD2-208ENST00000579814 WDR81Q562E7 1941 aa29.16■■■□□ 2.26
LIMD2-208ENST00000579814 SKIP12755 728 aa29.16■■■□□ 2.26
LIMD2-208ENST00000579814 CCT6AP40227 531 aaKnown RBP29.16■■■□□ 2.26
LIMD2-208ENST00000579814 PHKA2P46019 1235 aa29.16■■■□□ 2.26
LIMD2-208ENST00000579814 TJAP1Q5JTD0 557 aa29.16■■■□□ 2.26
LIMD2-208ENST00000579814 TRAIPQ9BWF2 469 aa29.16■■■□□ 2.26
LIMD2-208ENST00000579814 USO1O60763 962 aaKnown RBP29.15■■■□□ 2.26
LIMD2-208ENST00000579814 ARL2P36404 184 aa29.15■■■□□ 2.26
LIMD2-208ENST00000579814 PRPHP41219 470 aa29.15■■■□□ 2.26
LIMD2-208ENST00000579814 AAK1Q2M2I8 961 aa29.15■■■□□ 2.26
LIMD2-208ENST00000579814 TIGD5Q53EQ6 642 aa29.15■■■□□ 2.26
LIMD2-208ENST00000579814 POTEGQ6S5H5 508 aa29.15■■■□□ 2.26
LIMD2-208ENST00000579814 DTHD1Q6ZMT9 781 aa29.15■■■□□ 2.26
LIMD2-208ENST00000579814 SYMPKQ92797 1274 aaKnown RBP29.15■■■□□ 2.26
LIMD2-208ENST00000579814 HLA-CQ95604 372 aa29.15■■■□□ 2.26
LIMD2-208ENST00000579814 ASB2Q96Q27 587 aa29.15■■■□□ 2.26
LIMD2-208ENST00000579814 TYW1Q9NV66 732 aaKnown RBP29.15■■■□□ 2.26
LIMD2-208ENST00000579814 PLAGL2Q9UPG8 496 aa29.15■■■□□ 2.26
LIMD2-208ENST00000579814 PCDHB12Q9Y5F1 795 aa29.15■■■□□ 2.26
LIMD2-208ENST00000579814 A0A0C4DFX4 3053 aa29.14■■■□□ 2.26
LIMD2-208ENST00000579814 PRUNE2Q8WUY3 3088 aa29.14■■■□□ 2.26
LIMD2-208ENST00000579814 GRM6O15303 877 aa29.14■■■□□ 2.26
LIMD2-208ENST00000579814 POU5F1BQ06416 359 aa29.14■■■□□ 2.26
LIMD2-208ENST00000579814 AGPAT5Q9NUQ2 364 aa29.14■■■□□ 2.26
LIMD2-208ENST00000579814 PTENP60484 403 aa29.13■■■□□ 2.25
LIMD2-208ENST00000579814 PCBP1Q15365 356 aaKnown RBP eCLIP29.13■■■□□ 2.25
LIMD2-208ENST00000579814 ZNF598Q86UK7 904 aaKnown RBP29.13■■■□□ 2.25
LIMD2-208ENST00000579814 IGSF22Q8N9C0 903 aa29.13■■■□□ 2.25
LIMD2-208ENST00000579814 KLHL23Q8NBE8 558 aa29.13■■■□□ 2.25
LIMD2-208ENST00000579814 MCPH1Q8NEM0 835 aa29.13■■■□□ 2.25
LIMD2-208ENST00000579814 CASD1Q96PB1 797 aa29.13■■■□□ 2.25
LIMD2-208ENST00000579814 MINDY3Q9H8M7 445 aa29.13■■■□□ 2.25
LIMD2-208ENST00000579814 ALG13Q9NP73 1137 aaKnown RBP29.13■■■□□ 2.25
LIMD2-208ENST00000579814 ARHGEF35A5YM69 484 aa29.12■■■□□ 2.25
LIMD2-208ENST00000579814 PDCP20941 246 aa29.12■■■□□ 2.25
LIMD2-208ENST00000579814 RAB27AP51159 221 aa29.12■■■□□ 2.25
LIMD2-208ENST00000579814 NCBP1Q09161 790 aaKnown RBP29.12■■■□□ 2.25
LIMD2-208ENST00000579814 MAEAQ7L5Y9 396 aa29.12■■■□□ 2.25
LIMD2-208ENST00000579814 ASAP3Q8TDY4 903 aa29.12■■■□□ 2.25
LIMD2-208ENST00000579814 SNX29Q8TEQ0 813 aa29.12■■■□□ 2.25
LIMD2-208ENST00000579814 COL25A1Q9BXS0 654 aaPredicted RBP29.12■■■□□ 2.25
LIMD2-208ENST00000579814 POLR3FQ9H1D9 316 aaPredicted RBP29.12■■■□□ 2.25
LIMD2-208ENST00000579814 NSUN3Q9H649 340 aaKnown RBP29.12■■■□□ 2.25
LIMD2-208ENST00000579814 RNF19AQ9NV58 838 aa29.12■■■□□ 2.25
LIMD2-208ENST00000579814 LOXHD1Q8IVV2 1947 aa29.12■■■□□ 2.25
LIMD2-208ENST00000579814 ERLIN2O94905 339 aa29.11■■■□□ 2.25
LIMD2-208ENST00000579814 GLRA2P23416 452 aa29.11■■■□□ 2.25
LIMD2-208ENST00000579814 CSPP1Q1MSJ5 1256 aa29.11■■■□□ 2.25
LIMD2-208ENST00000579814 KRT79Q5XKE5 535 aa29.11■■■□□ 2.25
LIMD2-208ENST00000579814 PADI6Q6TGC4 694 aa29.11■■■□□ 2.25
LIMD2-208ENST00000579814 FAM105AQ9NUU6 356 aa29.11■■■□□ 2.25
LIMD2-208ENST00000579814 KIAA1024Q9UPX6 916 aa29.11■■■□□ 2.25
LIMD2-208ENST00000579814 INO80B-WBP1J3KQ70 363 aa29.1■■■□□ 2.25
LIMD2-208ENST00000579814 ZNF623O75123 536 aa29.1■■■□□ 2.25
LIMD2-208ENST00000579814 ITGB1P05556 798 aa29.1■■■□□ 2.25
LIMD2-208ENST00000579814 LAG3P18627 525 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms