RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 NXPE3Q969Y0 559 aa15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 MXRA8Q9BRK3 442 aa15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 VN1R3Q9BXE9 311 aa15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 NRDE2Q9H7Z3 1164 aa15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 SH2B1Q9NRF2 756 aaPredicted RBP15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 SEC63Q9UGP8 760 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 FBXO4Q9UKT5 387 aa15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 MTF2Q9Y483 593 aaPredicted RBP15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 PCDHGA2Q9Y5H1 932 aa15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 BAZ2BQ9UIF8 2168 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-213ENST00000579605 A0A0U1RQF3 1178 aa15□□□□□ -0.01
CDK5RAP3-213ENST00000579605 ATG7O95352 703 aa15□□□□□ -0.01
CDK5RAP3-213ENST00000579605 C22orf31O95567 290 aa15□□□□□ -0.01
CDK5RAP3-213ENST00000579605 HOXB3P14651 431 aaPredicted RBP15□□□□□ -0.01
CDK5RAP3-213ENST00000579605 DMWDQ09019 674 aa15□□□□□ -0.01
CDK5RAP3-213ENST00000579605 TROAPQ12815 778 aa15□□□□□ -0.01
CDK5RAP3-213ENST00000579605 LPAL2Q16609 132 aa15□□□□□ -0.01
CDK5RAP3-213ENST00000579605 SWSAP1Q6NVH7 229 aa15□□□□□ -0.01
CDK5RAP3-213ENST00000579605 ZNF598Q86UK7 904 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-213ENST00000579605 CCDC60Q8IWA6 550 aaPredicted RBP15□□□□□ -0.01
CDK5RAP3-213ENST00000579605 BBXQ8WY36 941 aaPredicted RBP15□□□□□ -0.01
CDK5RAP3-213ENST00000579605 LPPQ93052 612 aa15□□□□□ -0.01
CDK5RAP3-213ENST00000579605 SHDQ96IW2 340 aa15□□□□□ -0.01
CDK5RAP3-213ENST00000579605 PIDD1Q9HB75 910 aa15□□□□□ -0.01
CDK5RAP3-213ENST00000579605 ZNF302Q9NR11 478 aa15□□□□□ -0.01
CDK5RAP3-213ENST00000579605 DNAJB4Q9UDY4 337 aa15□□□□□ -0.01
CDK5RAP3-213ENST00000579605 GMEB2Q9UKD1 530 aa15□□□□□ -0.01
CDK5RAP3-213ENST00000579605 NUMBLQ9Y6R0 609 aa15□□□□□ -0.01
CDK5RAP3-213ENST00000579605 COL1A2P08123 1366 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 CHD8Q9HCK8 2581 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 NFASCO94856 1347 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 FAM170BA6NMN3 283 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 INPPL1O15357 1258 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 CSDE1O75534 798 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 RFPL2O75678 378 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 CCNE2O96020 404 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 SPATA31D3P0C874 917 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 ATP4AP20648 1035 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 CD72P21854 359 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 EIF4BP23588 611 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 KIF5BP33176 963 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 SLC11A1P49279 550 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 STARD6P59095 220 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 GPC5P78333 572 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 SPEM2Q0P670 501 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 TRDNQ13061 729 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 HDAC1Q13547 482 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 ABHD15Q6UXT9 468 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 SPATA31D4Q6ZUB0 917 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 GET4Q7L5D6 327 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 CATIPQ7Z7H3 387 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 TICAM2Q86XR7 235 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 SMG7Q92540 1137 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 SCLT1Q96NL6 688 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 RPP25Q9BUL9 199 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 DSCC1Q9BVC3 393 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 EPC1Q9H2F5 836 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 ADAMTS10Q9H324 1103 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 AGO4Q9HCK5 861 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 DIAPH3Q9NSV4 1193 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 ZSCAN32Q9NX65 697 aa14.99□□□□□ -0.01
CDK5RAP3-213ENST00000579605 IGKV6D-21A0A0A0MT36 114 aa14.98□□□□□ -0.01
CDK5RAP3-213ENST00000579605 hCG_1642624A0A1W2PR95 340 aa14.98□□□□□ -0.01
CDK5RAP3-213ENST00000579605 KANSL1LA0AUZ9 987 aa14.98□□□□□ -0.01
CDK5RAP3-213ENST00000579605 LAMP2P13473 410 aa14.98□□□□□ -0.01
CDK5RAP3-213ENST00000579605 AK2P54819 239 aa14.98□□□□□ -0.01
CDK5RAP3-213ENST00000579605 EFCAB12Q6NXP0 572 aa14.98□□□□□ -0.01
CDK5RAP3-213ENST00000579605 CMTR1Q8N1G2 835 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-213ENST00000579605 LRRC71Q8N4P6 559 aa14.98□□□□□ -0.01
CDK5RAP3-213ENST00000579605 CMASQ8NFW8 434 aaPredicted RBP14.98□□□□□ -0.01
CDK5RAP3-213ENST00000579605 BORCS6Q96GS4 357 aa14.98□□□□□ -0.01
CDK5RAP3-213ENST00000579605 PGBD1Q96JS3 809 aa14.98□□□□□ -0.01
CDK5RAP3-213ENST00000579605 MAP7D2Q96T17 732 aa14.98□□□□□ -0.01
CDK5RAP3-213ENST00000579605 MYL10Q9BUA6 226 aa14.98□□□□□ -0.01
CDK5RAP3-213ENST00000579605 SLC2A4RGQ9NR83 387 aa14.98□□□□□ -0.01
CDK5RAP3-213ENST00000579605 MRPL17Q9NRX2 175 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-213ENST00000579605 TBC1D13Q9NVG8 400 aa14.98□□□□□ -0.01
CDK5RAP3-213ENST00000579605 TBC1D4O60343 1298 aa14.97□□□□□ -0.01
CDK5RAP3-213ENST00000579605 HTR4Q13639 388 aa14.97□□□□□ -0.01
CDK5RAP3-213ENST00000579605 NOMO2Q5JPE7 1267 aa14.97□□□□□ -0.01
CDK5RAP3-213ENST00000579605 ZNF280BQ86YH2 543 aa14.97□□□□□ -0.01
CDK5RAP3-213ENST00000579605 ZBTB44Q8NCP5 570 aa14.97□□□□□ -0.01
CDK5RAP3-213ENST00000579605 SPZ1Q9BXG8 430 aa14.97□□□□□ -0.01
CDK5RAP3-213ENST00000579605 DACT1Q9NYF0 836 aa14.97□□□□□ -0.01
CDK5RAP3-213ENST00000579605 ANGPTL2Q9UKU9 493 aa14.97□□□□□ -0.01
CDK5RAP3-213ENST00000579605 USP24Q9UPU5 2620 aa14.97□□□□□ -0.01
CDK5RAP3-213ENST00000579605 DENND4AQ7Z401 1863 aa14.97□□□□□ -0.01
CDK5RAP3-213ENST00000579605 MEIS3P2A8K0S8 358 aa14.96□□□□□ -0.01
CDK5RAP3-213ENST00000579605 SLC30A4O14863 429 aa14.96□□□□□ -0.01
CDK5RAP3-213ENST00000579605 LILRB3O75022 631 aa14.96□□□□□ -0.01
CDK5RAP3-213ENST00000579605 PLEKHA8P1O95397 391 aa14.96□□□□□ -0.01
CDK5RAP3-213ENST00000579605 ATRXP46100 2492 aa14.96□□□□□ -0.01
CDK5RAP3-213ENST00000579605 ACAP1Q15027 740 aa14.96□□□□□ -0.01
CDK5RAP3-213ENST00000579605 SLC44A4Q53GD3 710 aa14.96□□□□□ -0.01
CDK5RAP3-213ENST00000579605 MIS18BP1Q6P0N0 1132 aa14.96□□□□□ -0.01
CDK5RAP3-213ENST00000579605 GLB1LQ6UWU2 654 aa14.96□□□□□ -0.01
CDK5RAP3-213ENST00000579605 CTCFLQ8NI51 663 aaPredicted RBP14.96□□□□□ -0.01
CDK5RAP3-213ENST00000579605 NETO1Q8TDF5 533 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms