RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 PPM1EQ8WY54 764 aa26.62■■□□□ 1.85
LIMD2-207ENST00000579329 RC3H2Q9HBD1 1191 aaKnown RBP26.62■■□□□ 1.85
LIMD2-207ENST00000579329 MTMR6Q9Y217 621 aa26.62■■□□□ 1.85
LIMD2-207ENST00000579329 ADGRA3Q8IWK6 1321 aa26.62■■□□□ 1.85
LIMD2-207ENST00000579329 ARHGEF35A5YM69 484 aa26.61■■□□□ 1.85
LIMD2-207ENST00000579329 PP2D1A8MPX8 630 aa26.61■■□□□ 1.85
LIMD2-207ENST00000579329 TNFRSF10AO00220 468 aa26.61■■□□□ 1.85
LIMD2-207ENST00000579329 STX6O43752 255 aa26.61■■□□□ 1.85
LIMD2-207ENST00000579329 CSDE1O75534 798 aaKnown RBP26.61■■□□□ 1.85
LIMD2-207ENST00000579329 DGKIO75912 1065 aa26.61■■□□□ 1.85
LIMD2-207ENST00000579329 ECM1Q16610 540 aa26.61■■□□□ 1.85
LIMD2-207ENST00000579329 SPRED2Q7Z698 418 aa26.61■■□□□ 1.85
LIMD2-207ENST00000579329 SRGAP1Q7Z6B7 1085 aa26.61■■□□□ 1.85
LIMD2-207ENST00000579329 IFT122Q9HBG6 1241 aa26.61■■□□□ 1.85
LIMD2-207ENST00000579329 KIAA1024Q9UPX6 916 aa26.61■■□□□ 1.85
LIMD2-207ENST00000579329 VWA3AA6NCI4 1184 aa26.6■■□□□ 1.85
LIMD2-207ENST00000579329 SRGAP2CP0DJJ0 459 aa26.6■■□□□ 1.85
LIMD2-207ENST00000579329 IBSPP21815 317 aaPredicted RBP26.6■■□□□ 1.85
LIMD2-207ENST00000579329 TFDP1Q14186 410 aa26.6■■□□□ 1.85
LIMD2-207ENST00000579329 FIBCD1Q8N539 461 aa26.6■■□□□ 1.85
LIMD2-207ENST00000579329 RNF149Q8NC42 400 aa26.6■■□□□ 1.85
LIMD2-207ENST00000579329 MCPH1Q8NEM0 835 aa26.6■■□□□ 1.85
LIMD2-207ENST00000579329 ZNF689Q96CS4 500 aaPredicted RBP26.6■■□□□ 1.85
LIMD2-207ENST00000579329 SAMD11Q96NU1 681 aa26.6■■□□□ 1.85
LIMD2-207ENST00000579329 DDX19AQ9NUU7 478 aaKnown RBP26.6■■□□□ 1.85
LIMD2-207ENST00000579329 PCDHB7Q9Y5E2 793 aa26.6■■□□□ 1.85
LIMD2-207ENST00000579329 EPOPA6NHQ4 379 aa26.59■■□□□ 1.85
LIMD2-207ENST00000579329 ARL2P36404 184 aa26.59■■□□□ 1.85
LIMD2-207ENST00000579329 PHKA2P46019 1235 aa26.59■■□□□ 1.85
LIMD2-207ENST00000579329 ADGRE1Q14246 886 aa26.59■■□□□ 1.85
LIMD2-207ENST00000579329 SF3A1Q15459 793 aaKnown RBP26.59■■□□□ 1.85
LIMD2-207ENST00000579329 CATSPER4Q7RTX7 472 aa26.59■■□□□ 1.85
LIMD2-207ENST00000579329 POLR3FQ9H1D9 316 aaPredicted RBP26.59■■□□□ 1.85
LIMD2-207ENST00000579329 ELAC1Q9H777 363 aaKnown RBP26.59■■□□□ 1.85
LIMD2-207ENST00000579329 CHST12Q9NRB3 414 aa26.59■■□□□ 1.85
LIMD2-207ENST00000579329 DACT1Q9NYF0 836 aa26.59■■□□□ 1.85
LIMD2-207ENST00000579329 MTUS1Q9ULD2 1270 aa26.59■■□□□ 1.85
LIMD2-207ENST00000579329 IGFBP4P22692 258 aa26.58■■□□□ 1.85
LIMD2-207ENST00000579329 CDC25AP30304 524 aa26.58■■□□□ 1.85
LIMD2-207ENST00000579329 FAM189BP81408 668 aa26.58■■□□□ 1.85
LIMD2-207ENST00000579329 BTG3Q14201 252 aaPredicted RBP26.58■■□□□ 1.85
LIMD2-207ENST00000579329 PADI6Q6TGC4 694 aa26.58■■□□□ 1.85
LIMD2-207ENST00000579329 CMTR2Q8IYT2 770 aaKnown RBP26.58■■□□□ 1.85
LIMD2-207ENST00000579329 ASAP3Q8TDY4 903 aa26.58■■□□□ 1.85
LIMD2-207ENST00000579329 ZSCAN16Q9H4T2 348 aaPredicted RBP26.58■■□□□ 1.85
LIMD2-207ENST00000579329 TMEM161AQ9NX61 479 aa26.58■■□□□ 1.85
LIMD2-207ENST00000579329 RFXAPO00287 272 aa26.57■■□□□ 1.84
LIMD2-207ENST00000579329 POU5F1BQ06416 359 aa26.57■■□□□ 1.84
LIMD2-207ENST00000579329 AK8Q96MA6 479 aa26.57■■□□□ 1.84
LIMD2-207ENST00000579329 C17orf80Q9BSJ5 609 aa26.57■■□□□ 1.84
LIMD2-207ENST00000579329 MMTAG2Q9BU76 263 aaKnown RBP26.57■■□□□ 1.84
LIMD2-207ENST00000579329 BHMT2Q9H2M3 363 aa26.57■■□□□ 1.84
LIMD2-207ENST00000579329 DNM3Q9UQ16 869 aa26.57■■□□□ 1.84
LIMD2-207ENST00000579329 PIN4Q9Y237 131 aaKnown RBP26.57■■□□□ 1.84
LIMD2-207ENST00000579329 CYP11B2P19099 503 aa26.56■■□□□ 1.84
LIMD2-207ENST00000579329 COL9A1P20849 921 aa26.56■■□□□ 1.84
LIMD2-207ENST00000579329 GLRA2P23416 452 aa26.56■■□□□ 1.84
LIMD2-207ENST00000579329 CAPSQ13938 189 aa26.56■■□□□ 1.84
LIMD2-207ENST00000579329 MAEAQ7L5Y9 396 aa26.56■■□□□ 1.84
LIMD2-207ENST00000579329 FBXO22Q8NEZ5 403 aa26.56■■□□□ 1.84
LIMD2-207ENST00000579329 RWDD3Q9Y3V2 267 aa26.56■■□□□ 1.84
LIMD2-207ENST00000579329 TCF20Q9UGU0 1960 aaKnown RBP26.56■■□□□ 1.84
LIMD2-207ENST00000579329 COL4A4P53420 1690 aaPredicted RBP26.55■■□□□ 1.84
LIMD2-207ENST00000579329 EYA4O95677 639 aa26.55■■□□□ 1.84
LIMD2-207ENST00000579329 PDIA4P13667 645 aaKnown RBP26.55■■□□□ 1.84
LIMD2-207ENST00000579329 PTENP60484 403 aa26.55■■□□□ 1.84
LIMD2-207ENST00000579329 GRB10Q13322 594 aa26.55■■□□□ 1.84
LIMD2-207ENST00000579329 HYIQ5T013 277 aa26.55■■□□□ 1.84
LIMD2-207ENST00000579329 IFNLR1Q8IU57 520 aaPredicted RBP26.55■■□□□ 1.84
LIMD2-207ENST00000579329 KCTD17Q8N5Z5 321 aa26.55■■□□□ 1.84
LIMD2-207ENST00000579329 MINDY3Q9H8M7 445 aa26.55■■□□□ 1.84
LIMD2-207ENST00000579329 GPRC5CQ9NQ84 441 aa26.55■■□□□ 1.84
LIMD2-207ENST00000579329 CHD7Q9P2D1 2997 aa26.54■■□□□ 1.84
LIMD2-207ENST00000579329 E9PMD0 336 aa26.54■■□□□ 1.84
LIMD2-207ENST00000579329 GTPBP6O43824 516 aaPredicted RBP26.54■■□□□ 1.84
LIMD2-207ENST00000579329 GATMP50440 423 aa26.54■■□□□ 1.84
LIMD2-207ENST00000579329 PCBP1Q15365 356 aaKnown RBP eCLIP26.54■■□□□ 1.84
LIMD2-207ENST00000579329 ZRSR1Q15695 479 aaKnown RBP26.54■■□□□ 1.84
LIMD2-207ENST00000579329 PAN2Q504Q3 1202 aaKnown RBP26.54■■□□□ 1.84
LIMD2-207ENST00000579329 EPC2Q52LR7 807 aa26.54■■□□□ 1.84
LIMD2-207ENST00000579329 FAM102BQ5T8I3 360 aa26.54■■□□□ 1.84
LIMD2-207ENST00000579329 TWF2Q6IBS0 349 aaKnown RBP26.54■■□□□ 1.84
LIMD2-207ENST00000579329 FAM173BQ6P4H8 233 aa26.54■■□□□ 1.84
LIMD2-207ENST00000579329 ECHDC2Q86YB7 292 aa26.54■■□□□ 1.84
LIMD2-207ENST00000579329 TMEM192Q8IY95 271 aa26.54■■□□□ 1.84
LIMD2-207ENST00000579329 GDPD5Q8WTR4 605 aa26.54■■□□□ 1.84
LIMD2-207ENST00000579329 ATXN2LQ8WWM7 1075 aaKnown RBP26.54■■□□□ 1.84
LIMD2-207ENST00000579329 CDK5RAP3Q96JB5 506 aa26.54■■□□□ 1.84
LIMD2-207ENST00000579329 NFKBIZQ9BYH8 718 aa26.54■■□□□ 1.84
LIMD2-207ENST00000579329 NT5C3AQ9H0P0 336 aa26.54■■□□□ 1.84
LIMD2-207ENST00000579329 AGPAT5Q9NUQ2 364 aa26.54■■□□□ 1.84
LIMD2-207ENST00000579329 THEGQ9P2T0 379 aa26.54■■□□□ 1.84
LIMD2-207ENST00000579329 CLIC4Q9Y696 253 aa26.54■■□□□ 1.84
LIMD2-207ENST00000579329 BDP1A6H8Y1 2624 aa26.54■■□□□ 1.84
LIMD2-207ENST00000579329 RALGAPA2Q2PPJ7 1873 aa26.53■■□□□ 1.84
LIMD2-207ENST00000579329 A0A0U1RQF3 1178 aa26.53■■□□□ 1.84
LIMD2-207ENST00000579329 HOXA2O43364 376 aa26.53■■□□□ 1.84
LIMD2-207ENST00000579329 SLC26A4O43511 780 aa26.53■■□□□ 1.84
LIMD2-207ENST00000579329 POU3F3P20264 500 aaPredicted RBP26.53■■□□□ 1.84
LIMD2-207ENST00000579329 LONP1P36776 959 aaKnown RBP26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms