RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 TARBP2Q15633 366 aaKnown RBP9.65□□□□□ -0.86
CASC3-206ENST00000579238 ATAT1Q5SQI0 421 aa9.65□□□□□ -0.86
CASC3-206ENST00000579238 RARS2Q5T160 578 aaKnown RBP9.65□□□□□ -0.86
CASC3-206ENST00000579238 KIAA1841Q6NSI8 718 aa9.65□□□□□ -0.86
CASC3-206ENST00000579238 ZDHHC14Q8IZN3 488 aa9.65□□□□□ -0.86
CASC3-206ENST00000579238 VPS52Q8N1B4 723 aa9.65□□□□□ -0.86
CASC3-206ENST00000579238 TDRD5Q8NAT2 981 aaKnown RBP9.65□□□□□ -0.86
CASC3-206ENST00000579238 TMEM87AQ8NBN3 555 aa9.65□□□□□ -0.86
CASC3-206ENST00000579238 BICD2Q8TD16 824 aa9.65□□□□□ -0.86
CASC3-206ENST00000579238 NLRP7Q8WX94 980 aa9.65□□□□□ -0.86
CASC3-206ENST00000579238 RIT2Q99578 217 aa9.65□□□□□ -0.86
CASC3-206ENST00000579238 TRAIPQ9BWF2 469 aa9.65□□□□□ -0.86
CASC3-206ENST00000579238 GCOM2Q9BZD3 368 aaPredicted RBP9.65□□□□□ -0.86
CASC3-206ENST00000579238 ZBP1Q9H171 429 aa9.65□□□□□ -0.86
CASC3-206ENST00000579238 CHST12Q9NRB3 414 aa9.65□□□□□ -0.86
CASC3-206ENST00000579238 USTQ9Y2C2 406 aa9.65□□□□□ -0.86
CASC3-206ENST00000579238 IRAK3Q9Y616 596 aa9.65□□□□□ -0.86
CASC3-206ENST00000579238 NID2Q14112 1375 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 MYO10Q9HD67 2058 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.64□□□□□ -0.87
CASC3-206ENST00000579238 MSH4O15457 936 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 EDIL3O43854 480 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 ZC3H11AO75152 810 aaKnown RBP eCLIP9.64□□□□□ -0.87
CASC3-206ENST00000579238 CTSAP10619 480 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 SKIP12755 728 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 PHKA2P46019 1235 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 USP11P51784 963 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 JAK3P52333 1124 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 IRX6P78412 446 aaPredicted RBP9.64□□□□□ -0.87
CASC3-206ENST00000579238 AKAP17AQ02040 695 aaKnown RBP9.64□□□□□ -0.87
CASC3-206ENST00000579238 UGCGQ16739 394 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 BMP2KLQ5H9B9 411 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 DDX53Q86TM3 631 aaKnown RBP9.64□□□□□ -0.87
CASC3-206ENST00000579238 PLCD3Q8N3E9 789 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 C12orf76Q8N812 135 aaPredicted RBP9.64□□□□□ -0.87
CASC3-206ENST00000579238 TMEM105Q8N8V8 129 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 CCDC148Q8NFR7 591 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 RDM1Q8NG50 284 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 SLC22A17Q8WUG5 538 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 SLC5A5Q92911 643 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 CCDC136Q96JN2 1154 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 TEKT3Q9BXF9 490 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 UNC45AQ9H3U1 944 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 LIMD1Q9UGP4 676 aa9.64□□□□□ -0.87
CASC3-206ENST00000579238 DBR1Q9UK59 544 aaKnown RBP9.64□□□□□ -0.87
CASC3-206ENST00000579238 CFAP54Q96N23 3096 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 IGKV6-21A0A0C4DH24 114 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 CHMP2AO43633 222 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 CSDE1O75534 798 aaKnown RBP9.63□□□□□ -0.87
CASC3-206ENST00000579238 ASGR2P07307 311 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 GALTP07902 379 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 WEE2P0C1S8 567 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 EPCAMP16422 314 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 SFPQP23246 707 aaKnown RBP eCLIP9.63□□□□□ -0.87
CASC3-206ENST00000579238 NBL1P41271 181 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 DNM2P50570 870 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 CLCN5P51795 746 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 DRP2Q13474 957 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 XKR3Q5GH77 459 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 NOMO2Q5JPE7 1267 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 LRCH2Q5VUJ6 765 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 ASTLQ6HA08 431 aaPredicted RBP9.63□□□□□ -0.87
CASC3-206ENST00000579238 TWF2Q6IBS0 349 aaKnown RBP9.63□□□□□ -0.87
CASC3-206ENST00000579238 GLB1LQ6UWU2 654 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 Q6ZUG5 572 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 ZNF410Q86VK4 478 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 PPFIBP1Q86W92 1011 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 TMEM173Q86WV6 379 aaPredicted RBP9.63□□□□□ -0.87
CASC3-206ENST00000579238 AUTS2Q8WXX7 1259 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 IGSF21Q96ID5 467 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 CEP89Q96ST8 783 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 RNF26Q9BY78 433 aaPredicted RBP9.63□□□□□ -0.87
CASC3-206ENST00000579238 NIFKQ9BYG3 293 aaKnown RBP9.63□□□□□ -0.87
CASC3-206ENST00000579238 INO80BQ9C086 356 aaPredicted RBP9.63□□□□□ -0.87
CASC3-206ENST00000579238 SMOC2Q9H3U7 446 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 NRDE2Q9H7Z3 1164 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 FAM105AQ9NUU6 356 aa9.63□□□□□ -0.87
CASC3-206ENST00000579238 SEPT9Q9UHD8 586 aaPredicted RBP9.63□□□□□ -0.87
CASC3-206ENST00000579238 PTPRZ1P23471 2315 aaPredicted RBP9.63□□□□□ -0.87
CASC3-206ENST00000579238 PLXNA3P51805 1871 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 A0A087WZ62 844 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 PRR23AA6NEV1 266 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 ZNF623O75123 536 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 OFD1O75665 1012 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 PSMD10O75832 226 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 STBD1O95210 358 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 RAB27AP51159 221 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 NTRK3Q16288 839 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 MTERF2Q49AM1 385 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 KANK3Q6NY19 840 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 ASCL5Q7RTU5 278 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 MIER3Q7Z3K6 550 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 CABP7Q86V35 215 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 FBXL16Q8N461 479 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 KCNB2Q92953 911 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 BRF1Q92994 677 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 LPPQ93052 612 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 PHKBQ93100 1093 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 ACSF2Q96CM8 615 aaPredicted RBP9.62□□□□□ -0.87
CASC3-206ENST00000579238 FDXACB1Q9BRP7 624 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms