RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 MCPH1Q8NEM0 835 aa16.08■□□□□ 0.16
MKS1-207ENST00000578789 PRDM12Q9H4Q4 367 aa16.08■□□□□ 0.16
MKS1-207ENST00000578789 ZSCAN16Q9H4T2 348 aaPredicted RBP16.08■□□□□ 0.16
MKS1-207ENST00000578789 DDX19AQ9NUU7 478 aaKnown RBP16.08■□□□□ 0.16
MKS1-207ENST00000578789 KIAA1024Q9UPX6 916 aa16.08■□□□□ 0.16
MKS1-207ENST00000578789 ADGRA3Q8IWK6 1321 aa16.08■□□□□ 0.16
MKS1-207ENST00000578789 ARHGEF35A5YM69 484 aa16.07■□□□□ 0.16
MKS1-207ENST00000578789 EPOPA6NHQ4 379 aa16.07■□□□□ 0.16
MKS1-207ENST00000578789 SLC26A4O43511 780 aa16.07■□□□□ 0.16
MKS1-207ENST00000578789 HSP90AA1P07900 732 aaKnown RBP16.07■□□□□ 0.16
MKS1-207ENST00000578789 FOSL2P15408 326 aa16.07■□□□□ 0.16
MKS1-207ENST00000578789 FGFR4P22455 802 aa16.07■□□□□ 0.16
MKS1-207ENST00000578789 FAM189BP81408 668 aa16.07■□□□□ 0.16
MKS1-207ENST00000578789 POU5F1BQ06416 359 aa16.07■□□□□ 0.16
MKS1-207ENST00000578789 PTPAQ15257 358 aa16.07■□□□□ 0.16
MKS1-207ENST00000578789 PADI6Q6TGC4 694 aa16.07■□□□□ 0.16
MKS1-207ENST00000578789 KCTD17Q8N5Z5 321 aa16.07■□□□□ 0.16
MKS1-207ENST00000578789 RNF149Q8NC42 400 aa16.07■□□□□ 0.16
MKS1-207ENST00000578789 ASAP3Q8TDY4 903 aa16.07■□□□□ 0.16
MKS1-207ENST00000578789 AK8Q96MA6 479 aa16.07■□□□□ 0.16
MKS1-207ENST00000578789 TGS1Q96RS0 853 aaKnown RBP16.07■□□□□ 0.16
MKS1-207ENST00000578789 ELAC1Q9H777 363 aaKnown RBP16.07■□□□□ 0.16
MKS1-207ENST00000578789 CHST12Q9NRB3 414 aa16.07■□□□□ 0.16
MKS1-207ENST00000578789 MORC2Q9Y6X9 1032 aaPredicted RBP16.07■□□□□ 0.16
MKS1-207ENST00000578789 CHD7Q9P2D1 2997 aa16.07■□□□□ 0.16
MKS1-207ENST00000578789 CSDE1O75534 798 aaKnown RBP16.06■□□□□ 0.16
MKS1-207ENST00000578789 EYA4O95677 639 aa16.06■□□□□ 0.16
MKS1-207ENST00000578789 LINC00271P0C7V0 271 aa16.06■□□□□ 0.16
MKS1-207ENST00000578789 ZSCAN20P17040 1043 aaPredicted RBP16.06■□□□□ 0.16
MKS1-207ENST00000578789 CYP11B2P19099 503 aa16.06■□□□□ 0.16
MKS1-207ENST00000578789 GLRA2P23416 452 aa16.06■□□□□ 0.16
MKS1-207ENST00000578789 CDC25AP30304 524 aa16.06■□□□□ 0.16
MKS1-207ENST00000578789 PHKA2P46019 1235 aa16.06■□□□□ 0.16
MKS1-207ENST00000578789 CAPSQ13938 189 aa16.06■□□□□ 0.16
MKS1-207ENST00000578789 TFDP1Q14186 410 aa16.06■□□□□ 0.16
MKS1-207ENST00000578789 ADGRE1Q14246 886 aa16.06■□□□□ 0.16
MKS1-207ENST00000578789 CMTR2Q8IYT2 770 aaKnown RBP16.06■□□□□ 0.16
MKS1-207ENST00000578789 ARNTL2Q8WYA1 636 aa16.06■□□□□ 0.16
MKS1-207ENST00000578789 SAMD11Q96NU1 681 aa16.06■□□□□ 0.16
MKS1-207ENST00000578789 GAS2L1Q99501 681 aaPredicted RBP16.06■□□□□ 0.16
MKS1-207ENST00000578789 TRAIPQ9BWF2 469 aa16.06■□□□□ 0.16
MKS1-207ENST00000578789 NFKBIZQ9BYH8 718 aa16.06■□□□□ 0.16
MKS1-207ENST00000578789 POLR3FQ9H1D9 316 aaPredicted RBP16.06■□□□□ 0.16
MKS1-207ENST00000578789 BHMT2Q9H2M3 363 aa16.06■□□□□ 0.16
MKS1-207ENST00000578789 MINDY3Q9H8M7 445 aa16.06■□□□□ 0.16
MKS1-207ENST00000578789 TMEM161AQ9NX61 479 aa16.06■□□□□ 0.16
MKS1-207ENST00000578789 CLIC4Q9Y696 253 aa16.06■□□□□ 0.16
MKS1-207ENST00000578789 MYO9BQ13459 2157 aa16.06■□□□□ 0.16
MKS1-207ENST00000578789 SRGAP2CP0DJJ0 459 aa16.05■□□□□ 0.16
MKS1-207ENST00000578789 LONP1P36776 959 aaKnown RBP16.05■□□□□ 0.16
MKS1-207ENST00000578789 PTENP60484 403 aa16.05■□□□□ 0.16
MKS1-207ENST00000578789 PCBP1Q15365 356 aaKnown RBP eCLIP16.05■□□□□ 0.16
MKS1-207ENST00000578789 TMEM119Q4V9L6 283 aa16.05■□□□□ 0.16
MKS1-207ENST00000578789 FAM173BQ6P4H8 233 aa16.05■□□□□ 0.16
MKS1-207ENST00000578789 CATSPER4Q7RTX7 472 aa16.05■□□□□ 0.16
MKS1-207ENST00000578789 FIBCD1Q8N539 461 aa16.05■□□□□ 0.16
MKS1-207ENST00000578789 PNMA5Q96PV4 448 aa16.05■□□□□ 0.16
MKS1-207ENST00000578789 NT5C3AQ9H0P0 336 aa16.05■□□□□ 0.16
MKS1-207ENST00000578789 CERS4Q9HA82 394 aa16.05■□□□□ 0.16
MKS1-207ENST00000578789 GPRC5CQ9NQ84 441 aa16.05■□□□□ 0.16
MKS1-207ENST00000578789 AGPAT5Q9NUQ2 364 aa16.05■□□□□ 0.16
MKS1-207ENST00000578789 DACT1Q9NYF0 836 aa16.05■□□□□ 0.16
MKS1-207ENST00000578789 LRFN2Q9ULH4 789 aa16.05■□□□□ 0.16
MKS1-207ENST00000578789 PCDHB7Q9Y5E2 793 aa16.05■□□□□ 0.16
MKS1-207ENST00000578789 A0A0U1RQF3 1178 aa16.04■□□□□ 0.16
MKS1-207ENST00000578789 E9PMD0 336 aa16.04■□□□□ 0.16
MKS1-207ENST00000578789 POU3F3P20264 500 aaPredicted RBP16.04■□□□□ 0.16
MKS1-207ENST00000578789 GRIN1Q05586 938 aa16.04■□□□□ 0.16
MKS1-207ENST00000578789 GRB10Q13322 594 aa16.04■□□□□ 0.16
MKS1-207ENST00000578789 KCNK18Q7Z418 384 aa16.04■□□□□ 0.16
MKS1-207ENST00000578789 ZNF598Q86UK7 904 aaKnown RBP16.04■□□□□ 0.16
MKS1-207ENST00000578789 CABP7Q86V35 215 aa16.04■□□□□ 0.16
MKS1-207ENST00000578789 ECHDC2Q86YB7 292 aa16.04■□□□□ 0.16
MKS1-207ENST00000578789 CLP1Q92989 425 aaKnown RBP16.04■□□□□ 0.16
MKS1-207ENST00000578789 C17orf80Q9BSJ5 609 aa16.04■□□□□ 0.16
MKS1-207ENST00000578789 DNM3Q9UQ16 869 aa16.04■□□□□ 0.16
MKS1-207ENST00000578789 PIN4Q9Y237 131 aaKnown RBP16.04■□□□□ 0.16
MKS1-207ENST00000578789 LPXNO60711 386 aa16.03■□□□□ 0.16
MKS1-207ENST00000578789 ATF7P17544 494 aaPredicted RBP16.03■□□□□ 0.16
MKS1-207ENST00000578789 NASPP49321 788 aaPredicted RBP16.03■□□□□ 0.16
MKS1-207ENST00000578789 MBTD1Q05BQ5 628 aa16.03■□□□□ 0.16
MKS1-207ENST00000578789 BTG3Q14201 252 aaPredicted RBP16.03■□□□□ 0.16
MKS1-207ENST00000578789 FAM102BQ5T8I3 360 aa16.03■□□□□ 0.16
MKS1-207ENST00000578789 CDCA2Q69YH5 1023 aaPredicted RBP16.03■□□□□ 0.16
MKS1-207ENST00000578789 MAEAQ7L5Y9 396 aa16.03■□□□□ 0.16
MKS1-207ENST00000578789 MAFAQ8NHW3 353 aaPredicted RBP16.03■□□□□ 0.16
MKS1-207ENST00000578789 USP28Q96RU2 1077 aa16.03■□□□□ 0.16
MKS1-207ENST00000578789 RNF19AQ9NV58 838 aa16.03■□□□□ 0.16
MKS1-207ENST00000578789 FBXO2Q9UK22 296 aaPredicted RBP16.03■□□□□ 0.16
MKS1-207ENST00000578789 RWDD3Q9Y3V2 267 aa16.03■□□□□ 0.16
MKS1-207ENST00000578789 CDH23Q9H251 3354 aa16.02■□□□□ 0.16
MKS1-207ENST00000578789 C5orf67F2Z3F1 127 aa16.02■□□□□ 0.16
MKS1-207ENST00000578789 RFXAPO00287 272 aa16.02■□□□□ 0.16
MKS1-207ENST00000578789 HOXA2O43364 376 aa16.02■□□□□ 0.16
MKS1-207ENST00000578789 ZSCAN22P10073 491 aaPredicted RBP16.02■□□□□ 0.16
MKS1-207ENST00000578789 AXLP30530 894 aa16.02■□□□□ 0.16
MKS1-207ENST00000578789 GATMP50440 423 aa16.02■□□□□ 0.16
MKS1-207ENST00000578789 RAB27AP51159 221 aa16.02■□□□□ 0.16
MKS1-207ENST00000578789 AMHR2Q16671 573 aa16.02■□□□□ 0.16
MKS1-207ENST00000578789 EPC2Q52LR7 807 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms