RNA–Protein interactions for RNA: ENST00000578576.1

HS3ST3A1-202, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 3A1, humanhuman

TSL 3 BASIC

Gene HS3ST3A1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1-202ENST00000578576 XKR9Q5GH70 373 aa15.84■□□□□ 0.13
HS3ST3A1-202ENST00000578576 LRRC55Q6ZSA7 311 aa15.84■□□□□ 0.13
HS3ST3A1-202ENST00000578576 ALYREFQ86V81 257 aaKnown RBP15.84■□□□□ 0.13
HS3ST3A1-202ENST00000578576 SLFN12Q8IYM2 578 aa15.84■□□□□ 0.13
HS3ST3A1-202ENST00000578576 KHSRPQ92945 711 aaKnown RBP eCLIP15.84■□□□□ 0.13
HS3ST3A1-202ENST00000578576 CASD1Q96PB1 797 aa15.84■□□□□ 0.13
HS3ST3A1-202ENST00000578576 EIF2AK1Q9BQI3 630 aaKnown RBP15.84■□□□□ 0.13
HS3ST3A1-202ENST00000578576 PLVAPQ9BX97 442 aa15.84■□□□□ 0.13
HS3ST3A1-202ENST00000578576 CWH43Q9H720 699 aa15.84■□□□□ 0.13
HS3ST3A1-202ENST00000578576 TTC12Q9H892 705 aaPredicted RBP15.84■□□□□ 0.13
HS3ST3A1-202ENST00000578576 CLDND1Q9NY35 253 aa15.84■□□□□ 0.13
HS3ST3A1-202ENST00000578576 ARID2Q68CP9 1835 aa15.84■□□□□ 0.13
HS3ST3A1-202ENST00000578576 LINC01565O15544 149 aa15.83■□□□□ 0.12
HS3ST3A1-202ENST00000578576 YWHABP31946 246 aaKnown RBP15.83■□□□□ 0.12
HS3ST3A1-202ENST00000578576 ZNF174Q15697 407 aa15.83■□□□□ 0.12
HS3ST3A1-202ENST00000578576 ADGRD2Q7Z7M1 963 aa15.83■□□□□ 0.12
HS3ST3A1-202ENST00000578576 C4orf19Q8IY42 314 aa15.83■□□□□ 0.12
HS3ST3A1-202ENST00000578576 POF1BQ8WVV4 589 aa15.83■□□□□ 0.12
HS3ST3A1-202ENST00000578576 PRPF31Q8WWY3 499 aaKnown RBP15.83■□□□□ 0.12
HS3ST3A1-202ENST00000578576 P2RX5Q93086 422 aa15.83■□□□□ 0.12
HS3ST3A1-202ENST00000578576 ZSCAN31Q96LW9 406 aaPredicted RBP15.83■□□□□ 0.12
HS3ST3A1-202ENST00000578576 MTMR9Q96QG7 549 aa15.83■□□□□ 0.12
HS3ST3A1-202ENST00000578576 LMAN2LQ9H0V9 348 aa15.83■□□□□ 0.12
HS3ST3A1-202ENST00000578576 ELAC1Q9H777 363 aaKnown RBP15.83■□□□□ 0.12
HS3ST3A1-202ENST00000578576 ZSWIM4Q9H7M6 989 aa15.83■□□□□ 0.12
HS3ST3A1-202ENST00000578576 CFAP54Q96N23 3096 aa15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 FAM86C2PA6NEL3 165 aa15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 NEMFO60524 1076 aa15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 DKC1O60832 514 aaKnown RBP eCLIP15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 IL9P15248 144 aa15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 LTBRP36941 435 aa15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 PBX3P40426 434 aa15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 POLGP54098 1239 aaPredicted RBP15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 DLX2Q07687 328 aaPredicted RBP15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 SAFBQ15424 915 aaKnown RBP eCLIP15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 CLUL1Q15846 466 aa15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 LEXMQ3ZCV2 418 aa15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 CLLU1OSQ5K130 101 aa15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 RBM23Q86U06 439 aaKnown RBP15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 ZNF710Q8N1W2 664 aa15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 COLGALT1Q8NBJ5 622 aa15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 HELQQ8TDG4 1101 aa15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 LPPQ93052 612 aa15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 LLPHQ9BRT6 129 aaKnown RBP15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 DHX33Q9H6R0 707 aaKnown RBP15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 CD320Q9NPF0 282 aa15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 COL4A3BPQ9Y5P4 624 aa15.82■□□□□ 0.12
HS3ST3A1-202ENST00000578576 POTEMA6NI47 508 aa15.81■□□□□ 0.12
HS3ST3A1-202ENST00000578576 ATF7P17544 494 aaPredicted RBP15.81■□□□□ 0.12
HS3ST3A1-202ENST00000578576 PTCRAQ6ISU1 281 aaPredicted RBP15.81■□□□□ 0.12
HS3ST3A1-202ENST00000578576 OTUD6AQ7L8S5 288 aa15.81■□□□□ 0.12
HS3ST3A1-202ENST00000578576 CATSPER4Q7RTX7 472 aa15.81■□□□□ 0.12
HS3ST3A1-202ENST00000578576 ZNF598Q86UK7 904 aaKnown RBP15.81■□□□□ 0.12
HS3ST3A1-202ENST00000578576 NEK9Q8TD19 979 aa15.81■□□□□ 0.12
HS3ST3A1-202ENST00000578576 MICAL1Q8TDZ2 1067 aa15.81■□□□□ 0.12
HS3ST3A1-202ENST00000578576 PIGOQ8TEQ8 1089 aa15.81■□□□□ 0.12
HS3ST3A1-202ENST00000578576 SLC7A3Q8WY07 619 aa15.81■□□□□ 0.12
HS3ST3A1-202ENST00000578576 PABPC5Q96DU9 382 aaKnown RBP15.81■□□□□ 0.12
HS3ST3A1-202ENST00000578576 HSD17B14Q9BPX1 270 aa15.81■□□□□ 0.12
HS3ST3A1-202ENST00000578576 TMEM117Q9H0C3 514 aa15.81■□□□□ 0.12
HS3ST3A1-202ENST00000578576 MINDY3Q9H8M7 445 aa15.81■□□□□ 0.12
HS3ST3A1-202ENST00000578576 IFT122Q9HBG6 1241 aa15.81■□□□□ 0.12
HS3ST3A1-202ENST00000578576 PIN4Q9Y237 131 aaKnown RBP15.81■□□□□ 0.12
HS3ST3A1-202ENST00000578576 PCDHB12Q9Y5F1 795 aa15.81■□□□□ 0.12
HS3ST3A1-202ENST00000578576 A0A0U1RQF3 1178 aa15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 MEIS3P2A8K0S8 358 aa15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 FGF18O76093 207 aa15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 TECP42680 631 aa15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 RBM25P49756 843 aaKnown RBP15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 ERVFC1P60507 584 aa15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 CDC42EP1Q00587 391 aa15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 LAMTOR4Q0VGL1 99 aa15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 NBR1Q14596 966 aa15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 EMC2Q15006 297 aa15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 NAALADL2Q58DX5 795 aa15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 TWF2Q6IBS0 349 aaKnown RBP15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 ZNF410Q86VK4 478 aa15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 THNSL1Q8IYQ7 743 aa15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 FAM184AQ8NB25 1140 aa15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 FBXO18Q8NFZ0 1043 aa15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 PSPC1Q8WXF1 523 aaKnown RBP15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 JPH2Q9BR39 696 aaPredicted RBP15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 XPNPEP1Q9NQW7 623 aa15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 AAASQ9NRG9 546 aa15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 RNF216Q9NWF9 866 aaPredicted RBP15.8■□□□□ 0.12
HS3ST3A1-202ENST00000578576 GRXCR2A6NFK2 248 aa15.79■□□□□ 0.12
HS3ST3A1-202ENST00000578576 NT5C1B-RDH14C9J2C7 533 aa15.79■□□□□ 0.12
HS3ST3A1-202ENST00000578576 PER2O15055 1255 aa15.79■□□□□ 0.12
HS3ST3A1-202ENST00000578576 SFPQP23246 707 aaKnown RBP eCLIP15.79■□□□□ 0.12
HS3ST3A1-202ENST00000578576 RFC5P40937 340 aa15.79■□□□□ 0.12
HS3ST3A1-202ENST00000578576 PHKA2P46019 1235 aa15.79■□□□□ 0.12
HS3ST3A1-202ENST00000578576 NRIP1P48552 1158 aa15.79■□□□□ 0.12
HS3ST3A1-202ENST00000578576 RBM10P98175 930 aaKnown RBP15.79■□□□□ 0.12
HS3ST3A1-202ENST00000578576 CTC1Q2NKJ3 1217 aa15.79■□□□□ 0.12
HS3ST3A1-202ENST00000578576 FAM43BQ6ZT52 329 aaPredicted RBP15.79■□□□□ 0.12
HS3ST3A1-202ENST00000578576 ABI1Q8IZP0 508 aa15.79■□□□□ 0.12
HS3ST3A1-202ENST00000578576 RNF149Q8NC42 400 aa15.79■□□□□ 0.12
HS3ST3A1-202ENST00000578576 INO80BQ9C086 356 aaPredicted RBP15.79■□□□□ 0.12
HS3ST3A1-202ENST00000578576 CHST12Q9NRB3 414 aa15.79■□□□□ 0.12
HS3ST3A1-202ENST00000578576 SH2B1Q9NRF2 756 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms