RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 CFAP100Q494V2 611 aa6.54□□□□□ -1.36
PTPRM-207ENST00000578571 HSP90AB2PQ58FF8 381 aa6.54□□□□□ -1.36
PTPRM-207ENST00000578571 BTBD8Q5XKL5 378 aa6.54□□□□□ -1.36
PTPRM-207ENST00000578571 EGFLAMQ63HQ2 1017 aa6.54□□□□□ -1.36
PTPRM-207ENST00000578571 CNNM4Q6P4Q7 775 aa6.54□□□□□ -1.36
PTPRM-207ENST00000578571 UNC5CLQ8IV45 518 aa6.54□□□□□ -1.36
PTPRM-207ENST00000578571 DDX1Q92499 740 aaKnown RBP6.54□□□□□ -1.36
PTPRM-207ENST00000578571 LTV1Q96GA3 475 aaPredicted RBP6.54□□□□□ -1.36
PTPRM-207ENST00000578571 C11orf84Q9BUA3 381 aaPredicted RBP6.54□□□□□ -1.36
PTPRM-207ENST00000578571 TARS2Q9BW92 718 aaKnown RBP6.54□□□□□ -1.36
PTPRM-207ENST00000578571 MTFR1LQ9H019 292 aa6.54□□□□□ -1.36
PTPRM-207ENST00000578571 TRPC5Q9UL62 973 aaPredicted RBP6.54□□□□□ -1.36
PTPRM-207ENST00000578571 THRAP3Q9Y2W1 955 aaKnown RBP6.54□□□□□ -1.36
PTPRM-207ENST00000578571 ATP23Q9Y6H3 246 aa6.54□□□□□ -1.36
PTPRM-207ENST00000578571 PMF1-BGLAPU3KQ54 211 aa6.54□□□□□ -1.36
PTPRM-207ENST00000578571 COL5A2P05997 1499 aaPredicted RBP6.53□□□□□ -1.36
PTPRM-207ENST00000578571 PLCH1Q4KWH8 1693 aa6.53□□□□□ -1.36
PTPRM-207ENST00000578571 LMO7Q8WWI1 1683 aa6.53□□□□□ -1.36
PTPRM-207ENST00000578571 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.53□□□□□ -1.36
PTPRM-207ENST00000578571 NUAK1O60285 661 aa6.53□□□□□ -1.36
PTPRM-207ENST00000578571 C4BPAP04003 597 aaKnown RBP6.53□□□□□ -1.36
PTPRM-207ENST00000578571 ZBTB48P10074 688 aaPredicted RBP6.53□□□□□ -1.36
PTPRM-207ENST00000578571 YBX3P16989 372 aaKnown RBP eCLIP6.53□□□□□ -1.36
PTPRM-207ENST00000578571 THBS2P35442 1172 aa6.53□□□□□ -1.36
PTPRM-207ENST00000578571 FLT3P36888 993 aa6.53□□□□□ -1.36
PTPRM-207ENST00000578571 DLX2Q07687 328 aaPredicted RBP6.53□□□□□ -1.36
PTPRM-207ENST00000578571 ADAM9Q13443 819 aa6.53□□□□□ -1.36
PTPRM-207ENST00000578571 EIF4A2Q14240 407 aaKnown RBP6.53□□□□□ -1.36
PTPRM-207ENST00000578571 VWA3BQ502W6 1294 aa6.53□□□□□ -1.36
PTPRM-207ENST00000578571 CPZQ66K79 652 aa6.53□□□□□ -1.36
PTPRM-207ENST00000578571 UBE2R2Q712K3 238 aaPredicted RBP6.53□□□□□ -1.36
PTPRM-207ENST00000578571 STK32CQ86UX6 486 aa6.53□□□□□ -1.36
PTPRM-207ENST00000578571 NGEFQ8N5V2 710 aa6.53□□□□□ -1.36
PTPRM-207ENST00000578571 C2orf69Q8N8R5 385 aa6.53□□□□□ -1.36
PTPRM-207ENST00000578571 CHST14Q8NCH0 376 aa6.53□□□□□ -1.36
PTPRM-207ENST00000578571 WNK4Q96J92 1243 aa6.53□□□□□ -1.36
PTPRM-207ENST00000578571 ORAI3Q9BRQ5 295 aa6.53□□□□□ -1.36
PTPRM-207ENST00000578571 IRF2BPLQ9H1B7 796 aa6.53□□□□□ -1.36
PTPRM-207ENST00000578571 SLIT2O94813 1529 aa6.53□□□□□ -1.36
PTPRM-207ENST00000578571 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.53□□□□□ -1.36
PTPRM-207ENST00000578571 AFF2P51816 1311 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 ADAMTS20P59510 1910 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 LRP6O75581 1613 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 SLC12A8A0AV02 714 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 GSG1L2A8MUP6 293 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 KPNA6O60684 536 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 GJA4P35212 333 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 IL13P35225 146 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 CAP1Q01518 475 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 LMOD3Q0VAK6 560 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 SMAD4Q13485 552 aaKnown RBP6.52□□□□□ -1.37
PTPRM-207ENST00000578571 PCBP1Q15365 356 aaKnown RBP eCLIP6.52□□□□□ -1.37
PTPRM-207ENST00000578571 VPS72Q15906 364 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 AMOTQ4VCS5 1084 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 CD276Q5ZPR3 534 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 CIAPIN1Q6FI81 312 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 LIPIQ6XZB0 460 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 SAPCD2Q86UD0 394 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 LRRC56Q8IYG6 542 aaPredicted RBP6.52□□□□□ -1.37
PTPRM-207ENST00000578571 FAM9BQ8IZU0 186 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 DLG3Q92796 817 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 ZBTB8AQ96BR9 441 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 TOX2Q96NM4 488 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 PCDH18Q9HCL0 1135 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 RIC8BQ9NVN3 520 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 SPATA6Q9NWH7 488 aaPredicted RBP6.52□□□□□ -1.37
PTPRM-207ENST00000578571 B3GALT1Q9Y5Z6 326 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 CAMTA1Q9Y6Y1 1673 aa6.52□□□□□ -1.37
PTPRM-207ENST00000578571 IGSF1Q8N6C5 1336 aa6.51□□□□□ -1.37
PTPRM-207ENST00000578571 PEAK1Q9H792 1746 aa6.51□□□□□ -1.37
PTPRM-207ENST00000578571 SCDO00767 359 aa6.51□□□□□ -1.37
PTPRM-207ENST00000578571 FFAR3O14843 346 aa6.51□□□□□ -1.37
PTPRM-207ENST00000578571 IL2RBP14784 551 aa6.51□□□□□ -1.37
PTPRM-207ENST00000578571 AFF3P51826 1226 aaKnown RBP6.51□□□□□ -1.37
PTPRM-207ENST00000578571 NEK4P51957 841 aa6.51□□□□□ -1.37
PTPRM-207ENST00000578571 RTP5Q14D33 572 aa6.51□□□□□ -1.37
PTPRM-207ENST00000578571 PLEKHO1Q53GL0 409 aaPredicted RBP6.51□□□□□ -1.37
PTPRM-207ENST00000578571 SULT6B1Q6IMI4 303 aa6.51□□□□□ -1.37
PTPRM-207ENST00000578571 TMC5Q6UXY8 1006 aa6.51□□□□□ -1.37
PTPRM-207ENST00000578571 EP400NLQ6ZTU2 488 aa6.51□□□□□ -1.37
PTPRM-207ENST00000578571 TCP11L2Q8N4U5 519 aa6.51□□□□□ -1.37
PTPRM-207ENST00000578571 KYQ8NBH2 561 aa6.51□□□□□ -1.37
PTPRM-207ENST00000578571 BOCQ9BWV1 1114 aa6.51□□□□□ -1.37
PTPRM-207ENST00000578571 B4GALT6Q9UBX8 382 aa6.51□□□□□ -1.37
PTPRM-207ENST00000578571 COL3A1P02461 1466 aaPredicted RBP6.51□□□□□ -1.37
PTPRM-207ENST00000578571 COL18A1P39060 1754 aa6.51□□□□□ -1.37
PTPRM-207ENST00000578571 KDRP35968 1356 aa6.5□□□□□ -1.37
PTPRM-207ENST00000578571 PTPDC1A2A3K4 754 aa6.5□□□□□ -1.37
PTPRM-207ENST00000578571 HSP90AB1P08238 724 aaKnown RBP6.5□□□□□ -1.37
PTPRM-207ENST00000578571 MYCLP1P12525 358 aaPredicted RBP6.5□□□□□ -1.37
PTPRM-207ENST00000578571 IRF9Q00978 393 aa6.5□□□□□ -1.37
PTPRM-207ENST00000578571 CALD1Q05682 793 aaKnown RBP6.5□□□□□ -1.37
PTPRM-207ENST00000578571 DBPQ10586 325 aaPredicted RBP6.5□□□□□ -1.37
PTPRM-207ENST00000578571 SEPT7Q16181 437 aaKnown RBP6.5□□□□□ -1.37
PTPRM-207ENST00000578571 ARHGAP44Q17R89 818 aa6.5□□□□□ -1.37
PTPRM-207ENST00000578571 SKOR2Q2VWA4 1001 aaPredicted RBP6.5□□□□□ -1.37
PTPRM-207ENST00000578571 C1orf141Q5JVX7 400 aa6.5□□□□□ -1.37
PTPRM-207ENST00000578571 CREB3L3Q68CJ9 461 aa6.5□□□□□ -1.37
PTPRM-207ENST00000578571 THNSL2Q86YJ6 484 aa6.5□□□□□ -1.37
PTPRM-207ENST00000578571 PPM1KQ8N3J5 372 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms