RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 SMARCE1Q969G3 411 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 SYAP1Q96A49 352 aaPredicted RBP13.42□□□□□ -0.26
IFT20-207ENST00000578547 KIFC3Q9BVG8 833 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 NOC4LQ9BVI4 516 aaKnown RBP13.42□□□□□ -0.26
IFT20-207ENST00000578547 TMEM39AQ9NV64 488 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 EXOC1Q9NV70 894 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 TBC1D7Q9P0N9 293 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 PCDH10Q9P2E7 1040 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 TBX21Q9UL17 535 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 ALPK3Q96L96 1907 aa13.41□□□□□ -0.26
IFT20-207ENST00000578547 PLS3P13797 630 aa13.41□□□□□ -0.26
IFT20-207ENST00000578547 GAP43P17677 238 aa13.41□□□□□ -0.26
IFT20-207ENST00000578547 GPC3P51654 580 aa13.41□□□□□ -0.26
IFT20-207ENST00000578547 MRPS6P82932 125 aaKnown RBP13.41□□□□□ -0.26
IFT20-207ENST00000578547 TFDP1Q14186 410 aa13.41□□□□□ -0.26
IFT20-207ENST00000578547 MXD4Q14582 209 aaPredicted RBP13.41□□□□□ -0.26
IFT20-207ENST00000578547 PPP2R5AQ15172 486 aa13.41□□□□□ -0.26
IFT20-207ENST00000578547 KMT5BQ4FZB7 885 aa13.41□□□□□ -0.26
IFT20-207ENST00000578547 CNNM4Q6P4Q7 775 aa13.41□□□□□ -0.26
IFT20-207ENST00000578547 UNC13DQ70J99 1090 aa13.41□□□□□ -0.26
IFT20-207ENST00000578547 ELOA2Q8IYF1 753 aaPredicted RBP13.41□□□□□ -0.26
IFT20-207ENST00000578547 RNF149Q8NC42 400 aa13.41□□□□□ -0.26
IFT20-207ENST00000578547 DEPTORQ8TB45 409 aa13.41□□□□□ -0.26
IFT20-207ENST00000578547 CCDC47Q96A33 483 aaKnown RBP13.41□□□□□ -0.26
IFT20-207ENST00000578547 KMT5AQ9NQR1 393 aa13.41□□□□□ -0.26
IFT20-207ENST00000578547 TMEM63CQ9P1W3 806 aa13.41□□□□□ -0.26
IFT20-207ENST00000578547 LARSQ9P2J5 1176 aaKnown RBP13.41□□□□□ -0.26
IFT20-207ENST00000578547 PCDHA5Q9Y5H7 936 aa13.41□□□□□ -0.26
IFT20-207ENST00000578547 UMODL1Q5DID0 1318 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 MKI67P46013 3256 aaKnown RBP13.4□□□□□ -0.26
IFT20-207ENST00000578547 A0A087WZ62 844 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 PVALEFA0A1B0GWK0 134 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 RBAK-RBAKDNI3L0D1 243 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 K7ENM7 598 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 BIN1O00499 593 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 KIAA0355O15063 1070 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 SLC16A4O15374 487 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 ASAP2O43150 1006 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 KLRC4O43908 158 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 CKBP12277 381 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 ITGB8P26012 769 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 NMT1P30419 496 aaKnown RBP13.4□□□□□ -0.26
IFT20-207ENST00000578547 CYP2C18P33260 490 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 NAMPTP43490 491 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 PHKA2P46019 1235 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 NPTX2P47972 431 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 ZNF131P52739 623 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 BFSP2Q13515 415 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 FAM26FQ5R3K3 315 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 ZNF618Q5T7W0 954 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 ISM2Q6H9L7 571 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 FAM178BQ8IXR5 827 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 NME8Q8N427 588 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 OSMRQ99650 979 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 FDXACB1Q9BRP7 624 aaPredicted RBP13.4□□□□□ -0.26
IFT20-207ENST00000578547 PPP1R12CQ9BZL4 782 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 HIPK3Q9H422 1215 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 MRPL44Q9H9J2 332 aaKnown RBP13.4□□□□□ -0.26
IFT20-207ENST00000578547 RNF216Q9NWF9 866 aaPredicted RBP13.4□□□□□ -0.26
IFT20-207ENST00000578547 TRPV2Q9Y5S1 764 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 CDY2AQ9Y6F7 541 aa13.4□□□□□ -0.26
IFT20-207ENST00000578547 MYH11P35749 1972 aa13.4□□□□□ -0.27
IFT20-207ENST00000578547 ADGRA3Q8IWK6 1321 aa13.39□□□□□ -0.27
IFT20-207ENST00000578547 FRMD3A2A2Y4 597 aa13.39□□□□□ -0.27
IFT20-207ENST00000578547 GPR32O75388 356 aa13.39□□□□□ -0.27
IFT20-207ENST00000578547 RPLP2P05387 115 aaKnown RBP13.39□□□□□ -0.27
IFT20-207ENST00000578547 SYN1P17600 705 aa13.39□□□□□ -0.27
IFT20-207ENST00000578547 SMTNP53814 917 aa13.39□□□□□ -0.27
IFT20-207ENST00000578547 RBL2Q08999 1139 aa13.39□□□□□ -0.27
IFT20-207ENST00000578547 TRAF7Q6Q0C0 670 aa13.39□□□□□ -0.27
IFT20-207ENST00000578547 RPAINQ86UA6 219 aa13.39□□□□□ -0.27
IFT20-207ENST00000578547 ZBTB8OSQ8IWT0 167 aa13.39□□□□□ -0.27
IFT20-207ENST00000578547 CAGE1Q8TC20 777 aa13.39□□□□□ -0.27
IFT20-207ENST00000578547 CELF4Q9BZC1 486 aaKnown RBP13.39□□□□□ -0.27
IFT20-207ENST00000578547 ADAMTS10Q9H324 1103 aa13.39□□□□□ -0.27
IFT20-207ENST00000578547 C17orf75Q9HAS0 396 aa13.39□□□□□ -0.27
IFT20-207ENST00000578547 CDHR5Q9HBB8 845 aa13.39□□□□□ -0.27
IFT20-207ENST00000578547 RMND1Q9NWS8 449 aa13.39□□□□□ -0.27
IFT20-207ENST00000578547 KIAA1468Q9P260 1216 aa13.39□□□□□ -0.27
IFT20-207ENST00000578547 SEL1LQ9UBV2 794 aa13.39□□□□□ -0.27
IFT20-207ENST00000578547 MAN1B1Q9UKM7 699 aa13.39□□□□□ -0.27
IFT20-207ENST00000578547 ZMYND8Q9ULU4 1186 aaPredicted RBP13.39□□□□□ -0.27
IFT20-207ENST00000578547 INO80B-WBP1J3KQ70 363 aa13.38□□□□□ -0.27
IFT20-207ENST00000578547 CAND2O75155 1236 aa13.38□□□□□ -0.27
IFT20-207ENST00000578547 CSDE1O75534 798 aaKnown RBP13.38□□□□□ -0.27
IFT20-207ENST00000578547 GCNT3O95395 438 aa13.38□□□□□ -0.27
IFT20-207ENST00000578547 TIMP1P01033 207 aa13.38□□□□□ -0.27
IFT20-207ENST00000578547 CHRNA1P02708 482 aa13.38□□□□□ -0.27
IFT20-207ENST00000578547 MYBP10242 640 aa13.38□□□□□ -0.27
IFT20-207ENST00000578547 SELPP16109 830 aa13.38□□□□□ -0.27
IFT20-207ENST00000578547 CCL23P55773 120 aa13.38□□□□□ -0.27
IFT20-207ENST00000578547 MGAT3Q09327 533 aa13.38□□□□□ -0.27
IFT20-207ENST00000578547 LRRC8DQ7L1W4 858 aa13.38□□□□□ -0.27
IFT20-207ENST00000578547 ZNF410Q86VK4 478 aa13.38□□□□□ -0.27
IFT20-207ENST00000578547 GLIS3Q8NEA6 775 aa13.38□□□□□ -0.27
IFT20-207ENST00000578547 SPIRE2Q8WWL2 714 aa13.38□□□□□ -0.27
IFT20-207ENST00000578547 GSDMAQ96QA5 445 aa13.38□□□□□ -0.27
IFT20-207ENST00000578547 FGFBP2Q9BYJ0 223 aa13.38□□□□□ -0.27
IFT20-207ENST00000578547 GCOM2Q9BZD3 368 aaPredicted RBP13.38□□□□□ -0.27
IFT20-207ENST00000578547 INO80BQ9C086 356 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms