RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 SFNP31947 248 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 LMAN1P49257 510 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 DNA2P51530 1060 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 GYS2P54840 703 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 NCKAP1LP55160 1127 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 PSMC5P62195 406 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 KRT76Q01546 638 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 SLC7A5Q01650 507 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 PAK2Q13177 524 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 SF3B2Q13435 895 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 PLS1Q14651 629 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 KIF22Q14807 665 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 DALRD3Q5D0E6 543 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 TAF3Q5VWG9 929 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 INTS8Q75QN2 995 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 SLFN11Q7Z7L1 901 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 IFT20Q8IY31 132 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 USP38Q8NB14 1042 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 SLC17A8Q8NDX2 589 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 RDM1Q8NG50 284 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 HVCN1Q96D96 273 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 PDCD2LQ9BRP1 358 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 RPAP3Q9H6T3 665 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 GDF3Q9NR23 364 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 PXMP2Q9NR77 195 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 SUCLA2Q9P2R7 463 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 APEX2Q9UBZ4 518 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 STXBP5LQ9Y2K9 1186 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 SAMM50Q9Y512 469 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 MYH11P35749 1972 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 PARP14Q460N5 1801 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 WDR64B1ANS9 1081 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 KCNK3O14649 394 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 BACH1O14867 736 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 RNF40O75150 1001 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 HEXIM1O94992 359 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 MYCLP12524 364 aaPredicted RBP10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 TNFAIP3P21580 790 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 CCND2P30279 289 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 YWHABP31946 246 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 VAMP7P51809 220 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 GALCP54803 685 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 RPS6P62753 249 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 GTF2BQ00403 316 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 CETN1Q12798 172 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 SPP2Q13103 211 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 MTMR2Q13614 643 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 UGCGQ16739 394 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 EPC2Q52LR7 807 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 DCAF15Q66K64 600 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 RNF207Q6ZRF8 634 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 MAEAQ7L5Y9 396 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 PEX26Q7Z412 305 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 HAUS6Q7Z4H7 955 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 GOLGA6L1Q8N7Z2 621 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 XXYLT1Q8NBI6 393 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 ACTRT1Q8TDG2 376 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 AFAP1L1Q8TED9 768 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 RFFLQ8WZ73 363 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 CALR3Q96L12 384 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 TRERF1Q96PN7 1200 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 KRT12Q99456 494 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 SENP7Q9BQF6 1050 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 GPR88Q9GZN0 384 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 AS3MTQ9HBK9 375 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 HOMER2Q9NSB8 354 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 RNF146Q9NTX7 359 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 CALCOCO1Q9P1Z2 691 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 RGS17Q9UGC6 210 aaPredicted RBP10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 TMEM59LQ9UK28 342 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 PACSIN2Q9UNF0 486 aaPredicted RBP10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 EXOC7Q9UPT5 735 aa10.15□□□□□ -0.78
CDK5RAP3-208ENST00000578525 EMSYQ7Z589 1322 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 MYH10P35580 1976 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 GOLGA6BA6NDN3 693 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 GOLGA8KD6RF30 607 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 AGPSO00116 658 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 NFKBIEO00221 500 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 PGRMC1O00264 195 aaKnown RBP10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 PMM2O15305 246 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 CEP104O60308 925 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 OPA1O60313 960 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 ZBTB48P10074 688 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 GGCXP38435 758 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 GMPSP49915 693 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 MCCD1P59942 119 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 MRPS25P82663 173 aaKnown RBP10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 DGKZQ13574 1117 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 ARHGAP44Q17R89 818 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 XKR9Q5GH70 373 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 ARHGEF16Q5VV41 709 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 ALS2CLQ60I27 953 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 ZNF746Q6NUN9 644 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 NSMFQ6X4W1 530 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 NLRX1Q86UT6 975 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 GLYCTKQ8IVS8 523 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 SCYL3Q8IZE3 742 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 RASGEF1CQ8N431 466 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 LMO3Q8TAP4 145 aa10.14□□□□□ -0.79
CDK5RAP3-208ENST00000578525 SCFD2Q8WU76 684 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms