RNA–Protein interactions for RNA: ENST00000578150.1

TTC39C-205, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 499 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-205ENST00000578150 TRAIPQ9BWF2 469 aa21.73■■□□□ 1.07
TTC39C-205ENST00000578150 PUF60Q9UHX1 559 aaKnown RBP21.73■■□□□ 1.07
TTC39C-205ENST00000578150 A0A087WZ62 844 aa21.72■■□□□ 1.07
TTC39C-205ENST00000578150 C19orf67A6NJJ6 358 aa21.72■■□□□ 1.07
TTC39C-205ENST00000578150 LINC01565O15544 149 aa21.72■■□□□ 1.07
TTC39C-205ENST00000578150 BAG4O95429 457 aaKnown RBP21.72■■□□□ 1.07
TTC39C-205ENST00000578150 ALADP13716 330 aa21.72■■□□□ 1.07
TTC39C-205ENST00000578150 FDPSP14324 419 aaKnown RBP21.72■■□□□ 1.07
TTC39C-205ENST00000578150 PPM1AP35813 382 aa21.72■■□□□ 1.07
TTC39C-205ENST00000578150 NRIP1P48552 1158 aa21.72■■□□□ 1.07
TTC39C-205ENST00000578150 EPHA7Q15375 998 aa21.72■■□□□ 1.07
TTC39C-205ENST00000578150 ME3Q16798 604 aa21.72■■□□□ 1.07
TTC39C-205ENST00000578150 ZNF598Q86UK7 904 aaKnown RBP21.72■■□□□ 1.07
TTC39C-205ENST00000578150 RHPN2Q8IUC4 686 aa21.72■■□□□ 1.07
TTC39C-205ENST00000578150 MSLNLQ96KJ4 702 aa21.72■■□□□ 1.07
TTC39C-205ENST00000578150 SH2D3AQ9BRG2 576 aa21.72■■□□□ 1.07
TTC39C-205ENST00000578150 FDXACB1Q9BRP7 624 aaPredicted RBP21.72■■□□□ 1.07
TTC39C-205ENST00000578150 LRFN3Q9BTN0 628 aa21.72■■□□□ 1.07
TTC39C-205ENST00000578150 TLE6Q9H808 572 aa21.72■■□□□ 1.07
TTC39C-205ENST00000578150 HCSTQ9UBK5 93 aa21.72■■□□□ 1.07
TTC39C-205ENST00000578150 EYA4O95677 639 aa21.71■■□□□ 1.07
TTC39C-205ENST00000578150 SKIP12755 728 aa21.71■■□□□ 1.07
TTC39C-205ENST00000578150 FGFR4P22455 802 aa21.71■■□□□ 1.07
TTC39C-205ENST00000578150 RFC5P40937 340 aa21.71■■□□□ 1.07
TTC39C-205ENST00000578150 CLUL1Q15846 466 aa21.71■■□□□ 1.07
TTC39C-205ENST00000578150 PLA2G4FQ68DD2 849 aa21.71■■□□□ 1.07
TTC39C-205ENST00000578150 KCNT2Q6UVM3 1135 aa21.71■■□□□ 1.07
TTC39C-205ENST00000578150 LRRC55Q6ZSA7 311 aa21.71■■□□□ 1.07
TTC39C-205ENST00000578150 C4orf19Q8IY42 314 aa21.71■■□□□ 1.07
TTC39C-205ENST00000578150 NECAB1Q8N987 351 aa21.71■■□□□ 1.07
TTC39C-205ENST00000578150 MRPS27Q92552 414 aaKnown RBP21.71■■□□□ 1.07
TTC39C-205ENST00000578150 ZNF558Q96NG5 402 aa21.71■■□□□ 1.07
TTC39C-205ENST00000578150 MRPL9Q9BYD2 267 aaKnown RBP21.71■■□□□ 1.07
TTC39C-205ENST00000578150 FSCN2O14926 492 aa21.7■■□□□ 1.06
TTC39C-205ENST00000578150 CSDE1O75534 798 aaKnown RBP21.7■■□□□ 1.06
TTC39C-205ENST00000578150 NEK4P51957 841 aa21.7■■□□□ 1.06
TTC39C-205ENST00000578150 KRT17Q04695 432 aa21.7■■□□□ 1.06
TTC39C-205ENST00000578150 COASYQ13057 564 aa21.7■■□□□ 1.06
TTC39C-205ENST00000578150 NR5A1Q13285 461 aa21.7■■□□□ 1.06
TTC39C-205ENST00000578150 EARS2Q5JPH6 523 aaKnown RBP21.7■■□□□ 1.06
TTC39C-205ENST00000578150 CLLU1OSQ5K130 101 aa21.7■■□□□ 1.06
TTC39C-205ENST00000578150 OTUD6AQ7L8S5 288 aa21.7■■□□□ 1.06
TTC39C-205ENST00000578150 RBM23Q86U06 439 aaKnown RBP21.7■■□□□ 1.06
TTC39C-205ENST00000578150 POTEDQ86YR6 584 aa21.7■■□□□ 1.06
TTC39C-205ENST00000578150 RNF169Q8NCN4 708 aa21.7■■□□□ 1.06
TTC39C-205ENST00000578150 NSUN7Q8NE18 718 aaKnown RBP21.7■■□□□ 1.06
TTC39C-205ENST00000578150 TNFRSF25Q93038 417 aa21.7■■□□□ 1.06
TTC39C-205ENST00000578150 CEP170P1Q96L14 293 aa21.7■■□□□ 1.06
TTC39C-205ENST00000578150 LXNQ9BS40 222 aa21.7■■□□□ 1.06
TTC39C-205ENST00000578150 CLEC1BQ9P126 229 aa21.7■■□□□ 1.06
TTC39C-205ENST00000578150 CARNS1A5YM72 827 aa21.69■■□□□ 1.06
TTC39C-205ENST00000578150 GAS2O43903 313 aaKnown RBP21.69■■□□□ 1.06
TTC39C-205ENST00000578150 ATF7P17544 494 aaPredicted RBP21.69■■□□□ 1.06
TTC39C-205ENST00000578150 PHKA2P46019 1235 aa21.69■■□□□ 1.06
TTC39C-205ENST00000578150 POLGP54098 1239 aaPredicted RBP21.69■■□□□ 1.06
TTC39C-205ENST00000578150 ERVFC1P60507 584 aa21.69■■□□□ 1.06
TTC39C-205ENST00000578150 SPIRE1Q08AE8 756 aa21.69■■□□□ 1.06
TTC39C-205ENST00000578150 SMRP1Q8NCR6 262 aa21.69■■□□□ 1.06
TTC39C-205ENST00000578150 NLRP4Q96MN2 994 aa21.69■■□□□ 1.06
TTC39C-205ENST00000578150 DHX33Q9H6R0 707 aaKnown RBP21.69■■□□□ 1.06
TTC39C-205ENST00000578150 ZSWIM4Q9H7M6 989 aa21.69■■□□□ 1.06
TTC39C-205ENST00000578150 NGRNQ9NPE2 291 aaKnown RBP21.69■■□□□ 1.06
TTC39C-205ENST00000578150 SPG21Q9NZD8 308 aa21.69■■□□□ 1.06
TTC39C-205ENST00000578150 WRAP73Q9P2S5 460 aaPredicted RBP21.69■■□□□ 1.06
TTC39C-205ENST00000578150 PCDHGC5Q9Y5F6 944 aa21.69■■□□□ 1.06
TTC39C-205ENST00000578150 COL4A3BPQ9Y5P4 624 aa21.69■■□□□ 1.06
TTC39C-205ENST00000578150 DTNBO60941 627 aa21.68■■□□□ 1.06
TTC39C-205ENST00000578150 LARGE1O95461 756 aa21.68■■□□□ 1.06
TTC39C-205ENST00000578150 GLP2RO95838 553 aa21.68■■□□□ 1.06
TTC39C-205ENST00000578150 YWHABP31946 246 aaKnown RBP21.68■■□□□ 1.06
TTC39C-205ENST00000578150 RAB27AP51159 221 aa21.68■■□□□ 1.06
TTC39C-205ENST00000578150 NPEPPSP55786 919 aa21.68■■□□□ 1.06
TTC39C-205ENST00000578150 TRIM29Q14134 588 aa21.68■■□□□ 1.06
TTC39C-205ENST00000578150 DUSP6Q16828 381 aa21.68■■□□□ 1.06
TTC39C-205ENST00000578150 TWF2Q6IBS0 349 aaKnown RBP21.68■■□□□ 1.06
TTC39C-205ENST00000578150 NCAPH2Q6IBW4 605 aa21.68■■□□□ 1.06
TTC39C-205ENST00000578150 CATSPER4Q7RTX7 472 aa21.68■■□□□ 1.06
TTC39C-205ENST00000578150 PSPC1Q8WXF1 523 aaKnown RBP21.68■■□□□ 1.06
TTC39C-205ENST00000578150 IFT122Q9HBG6 1241 aa21.68■■□□□ 1.06
TTC39C-205ENST00000578150 C11orf16Q9NQ32 467 aa21.68■■□□□ 1.06
TTC39C-205ENST00000578150 PIN4Q9Y237 131 aaKnown RBP21.68■■□□□ 1.06
TTC39C-205ENST00000578150 DCXO43602 365 aa21.67■■□□□ 1.06
TTC39C-205ENST00000578150 ZNF623O75123 536 aa21.67■■□□□ 1.06
TTC39C-205ENST00000578150 SRGAP2BP0DMP2 458 aa21.67■■□□□ 1.06
TTC39C-205ENST00000578150 SRGAP1Q7Z6B7 1085 aa21.67■■□□□ 1.06
TTC39C-205ENST00000578150 KSR1Q8IVT5 923 aa21.67■■□□□ 1.06
TTC39C-205ENST00000578150 HELQQ8TDG4 1101 aa21.67■■□□□ 1.06
TTC39C-205ENST00000578150 TCP11Q8WWU5 503 aa21.67■■□□□ 1.06
TTC39C-205ENST00000578150 TCF25Q9BQ70 676 aa21.67■■□□□ 1.06
TTC39C-205ENST00000578150 ARIH1Q9Y4X5 557 aaPredicted RBP21.67■■□□□ 1.06
TTC39C-205ENST00000578150 FAM205CA6NFA0 338 aa21.66■■□□□ 1.06
TTC39C-205ENST00000578150 PER2O15055 1255 aa21.66■■□□□ 1.06
TTC39C-205ENST00000578150 ASAP2O43150 1006 aa21.66■■□□□ 1.06
TTC39C-205ENST00000578150 ALDH7A1P49419 539 aaKnown RBP21.66■■□□□ 1.06
TTC39C-205ENST00000578150 ZNF579Q8NAF0 562 aaKnown RBP21.66■■□□□ 1.06
TTC39C-205ENST00000578150 DYDC2Q96IM9 177 aa21.66■■□□□ 1.06
TTC39C-205ENST00000578150 ENTPD7Q9NQZ7 604 aa21.66■■□□□ 1.06
TTC39C-205ENST00000578150 AGPAT5Q9NUQ2 364 aa21.66■■□□□ 1.06
TTC39C-205ENST00000578150 FAM105AQ9NUU6 356 aa21.66■■□□□ 1.06
TTC39C-205ENST00000578150 RGL1Q9NZL6 768 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms