RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 BTBD18B2RXH4 712 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 SNAP23O00161 211 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 PRPF3O43395 683 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 PPFIA4O75335 1185 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 DGAT1O75907 488 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 ADCY5O95622 1261 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 BRD1O95696 1058 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 ESRRBO95718 433 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 ATP1A1P05023 1023 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 CYP2D6P10635 497 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 CPA1P15085 419 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 INPP5BP32019 993 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 MAP2K2P36507 400 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 KPNA2P52292 529 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 NLRP11P59045 1033 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 RBP5P82980 135 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 SEPT6Q14141 434 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 EXOC3L4Q17RC7 722 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 SV2CQ496J9 727 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 CEP55Q53EZ4 464 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 ZNF280DQ6N043 979 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 USP17L6PQ6QN14 398 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 CCDC149Q6ZUS6 474 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 PEX26Q7Z412 305 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 ERICH1Q86X53 443 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 CCDC105Q8IYK2 499 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 RIN2Q8WYP3 895 aaPredicted RBP3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 HDAC11Q96DB2 347 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 INTS4Q96HW7 963 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 VPS39Q96JC1 886 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 NUDCD1Q96RS6 583 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 STRBPQ96SI9 672 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 KIF2CQ99661 725 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 TM6SF1Q9BZW5 370 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 SPATC1LQ9H0A9 340 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 BLZF1Q9H2G9 400 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 TMX1Q9H3N1 280 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 ANTXR1Q9H6X2 564 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 VTA1Q9NP79 307 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 SCUBE2Q9NQ36 999 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 MAN1C1Q9NR34 630 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 OLFML3Q9NRN5 406 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 NKIRAS1Q9NYS0 192 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 MBD5Q9P267 1494 aa3.15□□□□□ -1.91
SMCHD1-203ENST00000577880 MYMKA6NI61 221 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 KIAA0391O15091 583 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 SPTLC1O15269 473 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 GAS2O43903 313 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 PLA2G4BP0C869 781 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 MYBP10242 640 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 DDX5P17844 614 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 DDIT3P35638 169 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 FLT3LGP49771 235 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 CACNB2Q08289 660 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 EPHA7Q15375 998 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 TAF11Q15544 211 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 DUOXA2Q1HG44 320 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 CTXN3Q4LDR2 81 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 FBXW10Q5XX13 1052 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 IQSEC1Q6DN90 963 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 PPP4R4Q6NUP7 873 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 EFCAB12Q6NXP0 572 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 ANKS3Q6ZW76 656 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 SMAP1Q8IYB5 467 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 BANK1Q8NDB2 785 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 RASGRP4Q8TDF6 673 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 TSC1Q92574 1164 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 DHX38Q92620 1227 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 APBA2Q99767 749 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 MXD3Q9BW11 206 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 ABCG4Q9H172 646 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 TLE6Q9H808 572 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 TRIM45Q9H8W5 580 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 SLC39A2Q9NP94 309 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 KCNK9Q9NPC2 374 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 SH3GLB2Q9NR46 395 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 TRMT1Q9NXH9 659 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 AMFRQ9UKV5 643 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 PPME1Q9Y570 386 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 USP31Q70CQ4 1352 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 A0A0D9SFI3 127 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 CFAP99D6REC4 459 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 SLC9A3R1O14745 358 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 PRMT3O60678 531 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 B3GAT3O94766 335 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 TMCC1O94876 653 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 NTSR2O95665 410 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 IRF1P10914 325 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 MBL2P11226 248 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 SAT1P21673 171 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 GCKP35557 465 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 CCL23P55773 120 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 TBCCQ15814 346 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 CCDC6Q16204 474 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 PTGISQ16647 500 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 FSCN1Q16658 493 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 ANO4Q32M45 955 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 APOA5Q6Q788 366 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 ARHGEF18Q6ZSZ5 1173 aa3.14□□□□□ -1.91
SMCHD1-203ENST00000577880 TLK2Q86UE8 772 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms