RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 ST20-MTHFSA0A0A6YYL1 179 aa7.34□□□□□ -1.23
NUP88-213ENST00000576862 KRTAP4-8A0A0G2JLE6 195 aa7.34□□□□□ -1.23
NUP88-213ENST00000576862 NPEPPSL1A6NEC2 478 aa7.34□□□□□ -1.23
NUP88-213ENST00000576862 MAFGO15525 162 aa7.34□□□□□ -1.23
NUP88-213ENST00000576862 H2AFYO75367 372 aaKnown RBP7.34□□□□□ -1.23
NUP88-213ENST00000576862 SYN1P17600 705 aa7.34□□□□□ -1.23
NUP88-213ENST00000576862 CDKN1CP49918 316 aaPredicted RBP7.34□□□□□ -1.23
NUP88-213ENST00000576862 RAC3P60763 192 aa7.34□□□□□ -1.23
NUP88-213ENST00000576862 CCDC62Q6P9F0 684 aa7.34□□□□□ -1.23
NUP88-213ENST00000576862 CDYL2Q8N8U2 506 aa7.34□□□□□ -1.23
NUP88-213ENST00000576862 LMBR1Q8WVP7 490 aa7.34□□□□□ -1.23
NUP88-213ENST00000576862 GFM2Q969S9 779 aaKnown RBP7.34□□□□□ -1.23
NUP88-213ENST00000576862 HIST1H2AHQ96KK5 128 aa7.34□□□□□ -1.23
NUP88-213ENST00000576862 GNRHR2Q96P88 292 aa7.34□□□□□ -1.23
NUP88-213ENST00000576862 LRRC37BQ96QE4 947 aa7.34□□□□□ -1.23
NUP88-213ENST00000576862 HIST1H2AJQ99878 128 aa7.34□□□□□ -1.23
NUP88-213ENST00000576862 FDXACB1Q9BRP7 624 aaPredicted RBP7.34□□□□□ -1.23
NUP88-213ENST00000576862 WNT8AQ9H1J5 351 aa7.34□□□□□ -1.23
NUP88-213ENST00000576862 USP18Q9UMW8 372 aa7.34□□□□□ -1.23
NUP88-213ENST00000576862 OAZ3Q9UMX2 235 aa7.34□□□□□ -1.23
NUP88-213ENST00000576862 LPLP06858 475 aa7.33□□□□□ -1.24
NUP88-213ENST00000576862 SESN2P58004 480 aaPredicted RBP7.33□□□□□ -1.24
NUP88-213ENST00000576862 ADAM8P78325 824 aa7.33□□□□□ -1.24
NUP88-213ENST00000576862 PLP2Q04941 152 aa7.33□□□□□ -1.24
NUP88-213ENST00000576862 DUSP8Q13202 625 aa7.33□□□□□ -1.24
NUP88-213ENST00000576862 ACAP1Q15027 740 aa7.33□□□□□ -1.24
NUP88-213ENST00000576862 FSCN1Q16658 493 aaKnown RBP7.33□□□□□ -1.24
NUP88-213ENST00000576862 CLEC14AQ86T13 490 aa7.33□□□□□ -1.24
NUP88-213ENST00000576862 DPYSL5Q9BPU6 564 aa7.33□□□□□ -1.24
NUP88-213ENST00000576862 TRIM8Q9BZR9 551 aa7.33□□□□□ -1.24
NUP88-213ENST00000576862 PRSS50Q9UI38 385 aa7.33□□□□□ -1.24
NUP88-213ENST00000576862 KCNG1Q9UIX4 513 aa7.33□□□□□ -1.24
NUP88-213ENST00000576862 SYNPO2Q9UMS6 1093 aa7.33□□□□□ -1.24
NUP88-213ENST00000576862 SEC24DO94855 1032 aaPredicted RBP7.32□□□□□ -1.24
NUP88-213ENST00000576862 CR2P20023 1033 aa7.32□□□□□ -1.24
NUP88-213ENST00000576862 ADCY7P51828 1080 aa7.32□□□□□ -1.24
NUP88-213ENST00000576862 ERVK-21P61565 698 aa7.32□□□□□ -1.24
NUP88-213ENST00000576862 ATP2C1P98194 919 aaPredicted RBP7.32□□□□□ -1.24
NUP88-213ENST00000576862 GLB1LQ6UWU2 654 aa7.32□□□□□ -1.24
NUP88-213ENST00000576862 GAREM2Q75VX8 874 aa7.32□□□□□ -1.24
NUP88-213ENST00000576862 TAX1BP1Q86VP1 789 aa7.32□□□□□ -1.24
NUP88-213ENST00000576862 GAB3Q8WWW8 586 aa7.32□□□□□ -1.24
NUP88-213ENST00000576862 LPPQ93052 612 aa7.32□□□□□ -1.24
NUP88-213ENST00000576862 EAF2Q96CJ1 260 aaPredicted RBP7.32□□□□□ -1.24
NUP88-213ENST00000576862 AHCYL2Q96HN2 611 aaKnown RBP7.32□□□□□ -1.24
NUP88-213ENST00000576862 GPATCH3Q96I76 525 aa7.32□□□□□ -1.24
NUP88-213ENST00000576862 ACAP3Q96P50 834 aa7.32□□□□□ -1.24
NUP88-213ENST00000576862 ORAI2Q96SN7 254 aa7.32□□□□□ -1.24
NUP88-213ENST00000576862 OSBPL6Q9BZF3 934 aa7.32□□□□□ -1.24
NUP88-213ENST00000576862 KCTD10Q9H3F6 313 aa7.32□□□□□ -1.24
NUP88-213ENST00000576862 PCDH12Q9NPG4 1184 aa7.32□□□□□ -1.24
NUP88-213ENST00000576862 C14orf119Q9NWQ9 140 aa7.32□□□□□ -1.24
NUP88-213ENST00000576862 PUF60Q9UHX1 559 aaKnown RBP7.32□□□□□ -1.24
NUP88-213ENST00000576862 COL4A3BPQ9Y5P4 624 aa7.32□□□□□ -1.24
NUP88-213ENST00000576862 RBM8AQ9Y5S9 174 aaKnown RBP7.32□□□□□ -1.24
NUP88-213ENST00000576862 NISCHQ9Y2I1 1504 aa7.32□□□□□ -1.24
NUP88-213ENST00000576862 K7ESF4 209 aa7.31□□□□□ -1.24
NUP88-213ENST00000576862 CDK11BP21127 795 aaKnown RBP7.31□□□□□ -1.24
NUP88-213ENST00000576862 ENPP1P22413 925 aa7.31□□□□□ -1.24
NUP88-213ENST00000576862 CANXP27824 592 aaKnown RBP7.31□□□□□ -1.24
NUP88-213ENST00000576862 GPR15P49685 360 aa7.31□□□□□ -1.24
NUP88-213ENST00000576862 CD69Q07108 199 aa7.31□□□□□ -1.24
NUP88-213ENST00000576862 FAPQ12884 760 aa7.31□□□□□ -1.24
NUP88-213ENST00000576862 SAFB2Q14151 953 aaKnown RBP eCLIP7.31□□□□□ -1.24
NUP88-213ENST00000576862 TCTN3Q6NUS6 607 aa7.31□□□□□ -1.24
NUP88-213ENST00000576862 CIR1Q86X95 450 aaPredicted RBP7.31□□□□□ -1.24
NUP88-213ENST00000576862 PRPF38AQ8NAV1 312 aaKnown RBP7.31□□□□□ -1.24
NUP88-213ENST00000576862 DNERQ8NFT8 737 aa7.31□□□□□ -1.24
NUP88-213ENST00000576862 SLC7A6OSQ96CW6 309 aaPredicted RBP7.31□□□□□ -1.24
NUP88-213ENST00000576862 SLC5A4Q9NY91 659 aa7.31□□□□□ -1.24
NUP88-213ENST00000576862 EVLQ9UI08 416 aaPredicted RBP7.31□□□□□ -1.24
NUP88-213ENST00000576862 CNOT11Q9UKZ1 510 aaKnown RBP7.31□□□□□ -1.24
NUP88-213ENST00000576862 ANKRD62A6NC57 917 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 GOLGA8AA7E2F4 631 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 GOLGA8BA8MQT2 603 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 K7ESM1 405 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 FOXS1O43638 330 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 CDC14BO60729 498 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 GAAP10253 952 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 LGALS4P56470 323 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 SCAND1P57086 179 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 PPARAQ07869 468 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 TCIRG1Q13488 830 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 UGT8Q16880 541 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 CCDC178Q5BJE1 867 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 NECAB2Q7Z6G3 386 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 GPR135Q8IZ08 494 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 PLA2G15Q8NCC3 412 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 PIK3C3Q8NEB9 887 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 TGFBRAP1Q8WUH2 860 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 RSAD2Q8WXG1 361 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 SLC6A15Q9H2J7 730 aa7.3□□□□□ -1.24
NUP88-213ENST00000576862 AGO3Q9H9G7 860 aaKnown RBP7.3□□□□□ -1.24
NUP88-213ENST00000576862 PMS2P1A4D2B8 440 aa7.29□□□□□ -1.24
NUP88-213ENST00000576862 PATE3B3GLJ2 98 aa7.29□□□□□ -1.24
NUP88-213ENST00000576862 SLC26A4O43511 780 aa7.29□□□□□ -1.24
NUP88-213ENST00000576862 GPR3P46089 330 aa7.29□□□□□ -1.24
NUP88-213ENST00000576862 EVA1CP58658 441 aa7.29□□□□□ -1.24
NUP88-213ENST00000576862 ICAM4Q14773 271 aa7.29□□□□□ -1.24
NUP88-213ENST00000576862 MAN2A1Q16706 1144 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms