RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 GIMAP7Q8NHV1 300 aa9.23□□□□□ -0.93
RPAIN-215ENST00000575112 PRCCQ92733 491 aaPredicted RBP9.23□□□□□ -0.93
RPAIN-215ENST00000575112 STAMBPL1Q96FJ0 436 aa9.23□□□□□ -0.93
RPAIN-215ENST00000575112 CUEDC2Q9H467 287 aa9.23□□□□□ -0.93
RPAIN-215ENST00000575112 ZNF408Q9H9D4 720 aa9.23□□□□□ -0.93
RPAIN-215ENST00000575112 DONSONQ9NYP3 566 aa9.23□□□□□ -0.93
RPAIN-215ENST00000575112 FAM198AQ9UFP1 575 aa9.23□□□□□ -0.93
RPAIN-215ENST00000575112 SWAP70Q9UH65 585 aa9.23□□□□□ -0.93
RPAIN-215ENST00000575112 GMNCA6NCL1 334 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 CAND2O75155 1236 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 FGGP02679 453 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 TNNI1P19237 187 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 CETN1Q12798 172 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 GRIPAP1Q4V328 841 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 FAM133BQ5BKY9 247 aaKnown RBP9.22□□□□□ -0.93
RPAIN-215ENST00000575112 KAZNQ674X7 775 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 CCDC121Q6ZUS5 278 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 TMEM179Q6ZVK1 233 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 SLFN12Q8IYM2 578 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 TCP11Q8WWU5 503 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 GLG1Q92896 1179 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 CNKSR1Q969H4 720 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 LXNQ9BS40 222 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 HEMGNQ9BXL5 484 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 WDR11Q9BZH6 1224 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 BAIAP2L1Q9UHR4 511 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 SNX24Q9Y343 169 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 PLCH1Q4KWH8 1693 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 A0A1W2PQJ5 194 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 CCDC189A1A4V9 331 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 IPO5O00410 1097 aaKnown RBP9.22□□□□□ -0.93
RPAIN-215ENST00000575112 CHUKO15111 745 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 TRAPPC3O43617 180 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 NEFHP12036 1026 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 PRLRP16471 622 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 SETQ01105 290 aaPredicted RBP9.22□□□□□ -0.93
RPAIN-215ENST00000575112 LRRC63Q05C16 580 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 ARHGEF16Q5VV41 709 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 OTUD6AQ7L8S5 288 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 LDHDQ86WU2 507 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 METTL13Q8N6R0 699 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 DNAJC18Q9H819 358 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 PARVGQ9HBI0 331 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 KDM3AQ9Y4C1 1321 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 NFIBO00712 420 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 SERPING1P05155 500 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 MYZAPP0CAP1 466 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 IL1R1P14778 569 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 UCHL3P15374 230 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 PRPHP41219 470 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 KCNJ1P48048 391 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 IFI35P80217 286 aaPredicted RBP9.22□□□□□ -0.93
RPAIN-215ENST00000575112 PREPLQ4J6C6 727 aaPredicted RBP9.22□□□□□ -0.93
RPAIN-215ENST00000575112 HIBCHQ6NVY1 386 aaPredicted RBP9.22□□□□□ -0.93
RPAIN-215ENST00000575112 SEPT14Q6ZU15 432 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 ZNF571Q7Z3V5 609 aaPredicted RBP9.22□□□□□ -0.93
RPAIN-215ENST00000575112 PODNQ7Z5L7 613 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 NIM1KQ8IY84 436 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 PROM2Q8N271 834 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 PPP1R13LQ8WUF5 828 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 MIEF2Q96C03 454 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 FAXDC2Q96IV6 333 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 TAF1DQ9H5J8 278 aaPredicted RBP9.22□□□□□ -0.93
RPAIN-215ENST00000575112 STK32BQ9NY57 414 aa9.22□□□□□ -0.93
RPAIN-215ENST00000575112 A0A1B0GUL6 1792 aa9.21□□□□□ -0.93
RPAIN-215ENST00000575112 PVALEFA0A1B0GWK0 134 aa9.21□□□□□ -0.93
RPAIN-215ENST00000575112 PJA2O43164 708 aa9.21□□□□□ -0.93
RPAIN-215ENST00000575112 CLTAP09496 248 aa9.21□□□□□ -0.93
RPAIN-215ENST00000575112 RDXP35241 583 aaKnown RBP9.21□□□□□ -0.93
RPAIN-215ENST00000575112 TNNC1P63316 161 aa9.21□□□□□ -0.93
RPAIN-215ENST00000575112 NAB2Q15742 525 aa9.21□□□□□ -0.93
RPAIN-215ENST00000575112 SMAD1Q15797 465 aaKnown RBP9.21□□□□□ -0.93
RPAIN-215ENST00000575112 MTERF2Q49AM1 385 aa9.21□□□□□ -0.93
RPAIN-215ENST00000575112 SYCP2LQ5T4T6 812 aa9.21□□□□□ -0.93
RPAIN-215ENST00000575112 CCDC105Q8IYK2 499 aa9.21□□□□□ -0.93
RPAIN-215ENST00000575112 KAT5Q92993 513 aa9.21□□□□□ -0.93
RPAIN-215ENST00000575112 KCNK9Q9NPC2 374 aa9.21□□□□□ -0.93
RPAIN-215ENST00000575112 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.21□□□□□ -0.93
RPAIN-215ENST00000575112 TRIM33Q9UPN9 1127 aa9.21□□□□□ -0.93
RPAIN-215ENST00000575112 AGAP1Q9UPQ3 857 aa9.21□□□□□ -0.93
RPAIN-215ENST00000575112 CD2APQ9Y5K6 639 aa9.21□□□□□ -0.93
RPAIN-215ENST00000575112 SHANK3Q9BYB0 1731 aa9.21□□□□□ -0.93
RPAIN-215ENST00000575112 NEBLO76041 1014 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 CREB1P16220 341 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 CDK17Q00537 523 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 DAB2IPQ5VWQ8 1189 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 NAIF1Q69YI7 327 aaPredicted RBP9.21□□□□□ -0.94
RPAIN-215ENST00000575112 SH3BP5LQ7L8J4 393 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 TBC1D1Q86TI0 1168 aaPredicted RBP9.21□□□□□ -0.94
RPAIN-215ENST00000575112 PNMA8AQ86V59 439 aaPredicted RBP9.21□□□□□ -0.94
RPAIN-215ENST00000575112 RBM46Q8TBY0 533 aaKnown RBP9.21□□□□□ -0.94
RPAIN-215ENST00000575112 CHURC1Q8WUH1 139 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 POMGNT1Q8WZA1 660 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 ANKS1AQ92625 1134 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 HAUS1Q96CS2 278 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 MTMR9Q96QG7 549 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 ERVK-5Q9HDB9 667 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 KLHL11Q9NVR0 708 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 NHSL1Q5SYE7 1610 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 LRRIQ4A6NIV6 560 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms