RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 POLGP54098 1239 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-214ENST00000574003 RBM10P98175 930 aaKnown RBP12.67□□□□□ -0.38
RPAIN-214ENST00000574003 NBR1Q14596 966 aa12.67□□□□□ -0.38
RPAIN-214ENST00000574003 ZNF174Q15697 407 aa12.67□□□□□ -0.38
RPAIN-214ENST00000574003 LEXMQ3ZCV2 418 aa12.67□□□□□ -0.38
RPAIN-214ENST00000574003 RBM23Q86U06 439 aaKnown RBP12.67□□□□□ -0.38
RPAIN-214ENST00000574003 C4orf19Q8IY42 314 aa12.67□□□□□ -0.38
RPAIN-214ENST00000574003 HELQQ8TDG4 1101 aa12.67□□□□□ -0.38
RPAIN-214ENST00000574003 PRPF31Q8WWY3 499 aaKnown RBP12.67□□□□□ -0.38
RPAIN-214ENST00000574003 PABPC5Q96DU9 382 aaKnown RBP12.67□□□□□ -0.38
RPAIN-214ENST00000574003 C8orf76Q96K31 380 aa12.67□□□□□ -0.38
RPAIN-214ENST00000574003 MTMR9Q96QG7 549 aa12.67□□□□□ -0.38
RPAIN-214ENST00000574003 NAP1L4Q99733 375 aaKnown RBP12.67□□□□□ -0.38
RPAIN-214ENST00000574003 PLVAPQ9BX97 442 aa12.67□□□□□ -0.38
RPAIN-214ENST00000574003 LMAN2LQ9H0V9 348 aa12.67□□□□□ -0.38
RPAIN-214ENST00000574003 DHX33Q9H6R0 707 aaKnown RBP12.67□□□□□ -0.38
RPAIN-214ENST00000574003 TTC12Q9H892 705 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-214ENST00000574003 MINDY3Q9H8M7 445 aa12.67□□□□□ -0.38
RPAIN-214ENST00000574003 ARID2Q68CP9 1835 aa12.67□□□□□ -0.38
RPAIN-214ENST00000574003 NEMFO60524 1076 aa12.66□□□□□ -0.38
RPAIN-214ENST00000574003 TBX10O75333 385 aa12.66□□□□□ -0.38
RPAIN-214ENST00000574003 CD2BP2O95400 341 aaKnown RBP12.66□□□□□ -0.38
RPAIN-214ENST00000574003 DNM2P50570 870 aa12.66□□□□□ -0.38
RPAIN-214ENST00000574003 ERVFC1P60507 584 aa12.66□□□□□ -0.38
RPAIN-214ENST00000574003 EMC2Q15006 297 aa12.66□□□□□ -0.38
RPAIN-214ENST00000574003 PTCRAQ6ISU1 281 aaPredicted RBP12.66□□□□□ -0.38
RPAIN-214ENST00000574003 ZNF598Q86UK7 904 aaKnown RBP12.66□□□□□ -0.38
RPAIN-214ENST00000574003 SLFN12Q8IYM2 578 aa12.66□□□□□ -0.38
RPAIN-214ENST00000574003 NEK9Q8TD19 979 aa12.66□□□□□ -0.38
RPAIN-214ENST00000574003 PIGOQ8TEQ8 1089 aa12.66□□□□□ -0.38
RPAIN-214ENST00000574003 P2RX5Q93086 422 aa12.66□□□□□ -0.38
RPAIN-214ENST00000574003 TMEM117Q9H0C3 514 aa12.66□□□□□ -0.38
RPAIN-214ENST00000574003 ELAC1Q9H777 363 aaKnown RBP12.66□□□□□ -0.38
RPAIN-214ENST00000574003 ZSWIM4Q9H7M6 989 aa12.66□□□□□ -0.38
RPAIN-214ENST00000574003 IFT122Q9HBG6 1241 aa12.66□□□□□ -0.38
RPAIN-214ENST00000574003 XPNPEP1Q9NQW7 623 aa12.66□□□□□ -0.38
RPAIN-214ENST00000574003 PCDHA12Q9UN75 941 aa12.66□□□□□ -0.38
RPAIN-214ENST00000574003 PIN4Q9Y237 131 aaKnown RBP12.66□□□□□ -0.38
RPAIN-214ENST00000574003 COL4A3BPQ9Y5P4 624 aa12.66□□□□□ -0.38
RPAIN-214ENST00000574003 NT5C1B-RDH14C9J2C7 533 aa12.65□□□□□ -0.38
RPAIN-214ENST00000574003 PER2O15055 1255 aa12.65□□□□□ -0.38
RPAIN-214ENST00000574003 EIF5BO60841 1220 aaKnown RBP12.65□□□□□ -0.38
RPAIN-214ENST00000574003 FGF18O76093 207 aa12.65□□□□□ -0.38
RPAIN-214ENST00000574003 LAMTOR4Q0VGL1 99 aa12.65□□□□□ -0.38
RPAIN-214ENST00000574003 COL19A1Q14993 1142 aa12.65□□□□□ -0.38
RPAIN-214ENST00000574003 TWF2Q6IBS0 349 aaKnown RBP12.65□□□□□ -0.38
RPAIN-214ENST00000574003 CATSPER4Q7RTX7 472 aa12.65□□□□□ -0.38
RPAIN-214ENST00000574003 ZNF410Q86VK4 478 aa12.65□□□□□ -0.38
RPAIN-214ENST00000574003 THNSL1Q8IYQ7 743 aa12.65□□□□□ -0.38
RPAIN-214ENST00000574003 SLC7A3Q8WY07 619 aa12.65□□□□□ -0.38
RPAIN-214ENST00000574003 HSD17B14Q9BPX1 270 aa12.65□□□□□ -0.38
RPAIN-214ENST00000574003 EPHX3Q9H6B9 360 aa12.65□□□□□ -0.38
RPAIN-214ENST00000574003 RAPGEFL1Q9UHV5 662 aa12.65□□□□□ -0.38
RPAIN-214ENST00000574003 PCDHB12Q9Y5F1 795 aa12.65□□□□□ -0.38
RPAIN-214ENST00000574003 A0A0U1RQF3 1178 aa12.64□□□□□ -0.39
RPAIN-214ENST00000574003 GRXCR2A6NFK2 248 aa12.64□□□□□ -0.39
RPAIN-214ENST00000574003 DKC1O60832 514 aaKnown RBP eCLIP12.64□□□□□ -0.39
RPAIN-214ENST00000574003 MED24O75448 989 aa12.64□□□□□ -0.39
RPAIN-214ENST00000574003 SFPQP23246 707 aaKnown RBP eCLIP12.64□□□□□ -0.39
RPAIN-214ENST00000574003 RFC5P40937 340 aa12.64□□□□□ -0.39
RPAIN-214ENST00000574003 PHKA2P46019 1235 aa12.64□□□□□ -0.39
RPAIN-214ENST00000574003 NRIP1P48552 1158 aa12.64□□□□□ -0.39
RPAIN-214ENST00000574003 RBM25P49756 843 aaKnown RBP12.64□□□□□ -0.39
RPAIN-214ENST00000574003 SAFBQ15424 915 aaKnown RBP eCLIP12.64□□□□□ -0.39
RPAIN-214ENST00000574003 CTC1Q2NKJ3 1217 aa12.64□□□□□ -0.39
RPAIN-214ENST00000574003 PLPP4Q5VZY2 271 aa12.64□□□□□ -0.39
RPAIN-214ENST00000574003 MAEAQ7L5Y9 396 aa12.64□□□□□ -0.39
RPAIN-214ENST00000574003 ABI1Q8IZP0 508 aa12.64□□□□□ -0.39
RPAIN-214ENST00000574003 RNF149Q8NC42 400 aa12.64□□□□□ -0.39
RPAIN-214ENST00000574003 FBXO18Q8NFZ0 1043 aa12.64□□□□□ -0.39
RPAIN-214ENST00000574003 ASAP3Q8TDY4 903 aa12.64□□□□□ -0.39
RPAIN-214ENST00000574003 MICAL1Q8TDZ2 1067 aa12.64□□□□□ -0.39
RPAIN-214ENST00000574003 PSPC1Q8WXF1 523 aaKnown RBP12.64□□□□□ -0.39
RPAIN-214ENST00000574003 ZSCAN31Q96LW9 406 aaPredicted RBP12.64□□□□□ -0.39
RPAIN-214ENST00000574003 LLPHQ9BRT6 129 aaKnown RBP12.64□□□□□ -0.39
RPAIN-214ENST00000574003 INPP5FQ9Y2H2 1132 aa12.64□□□□□ -0.39
RPAIN-214ENST00000574003 B4GALT3O60512 393 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 SPATA31C1P0DKV0 1188 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 LAG3P18627 525 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 HOXA11P31270 313 aaPredicted RBP12.63□□□□□ -0.39
RPAIN-214ENST00000574003 TECP42680 631 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 AFF1P51825 1210 aaKnown RBP12.63□□□□□ -0.39
RPAIN-214ENST00000574003 NAALADL2Q58DX5 795 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 KCNT2Q6UVM3 1135 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 OTUD6AQ7L8S5 288 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 FERMT3Q86UX7 667 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 FAM178BQ8IXR5 827 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 ZNF710Q8N1W2 664 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 LRRC43Q8N309 656 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 FAM184AQ8NB25 1140 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 VN1R2Q8NFZ6 395 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 MTRQ99707 1265 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 JPH2Q9BR39 696 aaPredicted RBP12.63□□□□□ -0.39
RPAIN-214ENST00000574003 POLD4Q9HCU8 107 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 GPRC5CQ9NQ84 441 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 SH2B1Q9NRF2 756 aaPredicted RBP12.63□□□□□ -0.39
RPAIN-214ENST00000574003 AAASQ9NRG9 546 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 FAM105AQ9NUU6 356 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 DACT1Q9NYF0 836 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 BARX2Q9UMQ3 279 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms