RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 ZNF564Q8TBZ8 553 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 AP1M1Q9BXS5 423 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 SLC38A10Q9HBR0 1119 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 ANAPC7Q9UJX3 599 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 SNX24Q9Y343 169 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 EIF3DO15371 548 aaKnown RBP eCLIP13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 H2AFXP16104 143 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 SESN3P58005 492 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 IRX1P78414 480 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 SATB1Q01826 763 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 METTL23Q86XA0 190 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 INO80BQ9C086 356 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 NACA2Q9H009 215 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 SNX25Q9H3E2 840 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 ATP6V0A4Q9HBG4 840 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 CCND1P24385 295 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 KCTD2Q14681 263 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 TRADDQ15628 312 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 NAB2Q15742 525 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 TXNRD1Q16881 649 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 RC3H1Q5TC82 1133 aaKnown RBP13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 ZNF677Q86XU0 584 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 COA7Q96BR5 231 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 ISCUQ9H1K1 167 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 SAYSD1Q9NPB0 183 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 DEPDC5O75140 1603 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 TEX33O43247 280 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 OATP04181 439 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 USP17L8P0C7I0 530 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 VAMP7P51809 220 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 NPEPPSP55786 919 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 CDR2Q01850 454 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 TBCCQ15814 346 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 BBS9Q3SYG4 887 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 RSBN1LQ6PCB5 846 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 CYFIP1Q7L576 1253 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 CDKL3Q8IVW4 592 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 VWDEQ8N2E2 1590 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 PLCD3Q8N3E9 789 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 EIF1ADQ8N9N8 165 aaKnown RBP13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 ARMC2Q8NEN0 867 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 IGDCC4Q8TDY8 1250 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 HDAC11Q96DB2 347 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 WDR24Q96S15 920 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 SEC31BQ9NQW1 1179 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 NARFQ9UHQ1 456 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 RASSF10A6NK89 507 aa13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 USP27XA6NNY8 438 aa13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 PHF2O75151 1096 aa13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 CSF1RP07333 972 aa13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 PAPOLAP51003 745 aaKnown RBP13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 RCN2Q14257 317 aa13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 PPP2R5DQ14738 602 aa13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 ZNF667Q5HYK9 610 aa13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 KIAA1755Q5JYT7 1200 aa13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 BSPRYQ5W0U4 402 aa13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 TTC19Q6DKK2 380 aaPredicted RBP13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 RAPH1Q70E73 1250 aa13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 TRAPPC11Q7Z392 1133 aa13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 SFR1Q86XK3 245 aa13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 MAGEB5Q9BZ81 275 aa13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 INTS2Q9H0H0 1204 aaKnown RBP13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 SUCLA2Q9P2R7 463 aaPredicted RBP13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 CREB3O43889 395 aa13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 FAM107AO95990 144 aa13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 ERFEQ4G0M1 354 aa13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 PLEKHA4Q9H4M7 779 aa13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 RPF1Q9H9Y2 349 aaKnown RBP13.21□□□□□ -0.29
PCDHGA9-201ENST00000573521 SRRM3A6NNA2 597 aaPredicted RBP13.21□□□□□ -0.3
PCDHGA9-201ENST00000573521 WDR46O15213 610 aaKnown RBP13.21□□□□□ -0.3
PCDHGA9-201ENST00000573521 CYP27B1O15528 508 aa13.21□□□□□ -0.3
PCDHGA9-201ENST00000573521 TMEM253P0C7T8 217 aa13.21□□□□□ -0.3
PCDHGA9-201ENST00000573521 SERPINB9P50453 376 aa13.21□□□□□ -0.3
PCDHGA9-201ENST00000573521 ARFIP2P53365 341 aa13.21□□□□□ -0.3
PCDHGA9-201ENST00000573521 SUSD4Q5VX71 490 aa13.21□□□□□ -0.3
PCDHGA9-201ENST00000573521 PIGBQ92521 554 aa13.21□□□□□ -0.3
PCDHGA9-201ENST00000573521 HPCAL4Q9UM19 191 aa13.21□□□□□ -0.3
PCDHGA9-201ENST00000573521 SERPINB2P05120 415 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 CORO7P57737 925 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 ATG9AQ7Z3C6 839 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 DEPDC1BQ8WUY9 529 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 ANKFY1Q9P2R3 1169 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 ZNF609O15014 1411 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 ATP1A1P05023 1023 aaKnown RBP13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 RPSAP08865 295 aaKnown RBP13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 TMPRSS15P98073 1019 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 DRAP1Q14919 205 aaPredicted RBP13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 CARD9Q9H257 536 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 CEMIPQ8WUJ3 1361 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 CENPCQ03188 943 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 CCDC137Q6PK04 289 aaKnown RBP13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 BTNL9Q6UXG8 535 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 SAMD3Q8N6K7 520 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 METTL13Q8N6R0 699 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 RPS6KC1Q96S38 1066 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 HERC5Q9UII4 1024 aaKnown RBP13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 PTPRMP28827 1452 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 PSMD3O43242 534 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 PRR29P0C7W0 189 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms