RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 DLX2Q07687 328 aaPredicted RBP19.37■□□□□ 0.69
SMG6-212ENST00000573153 CEP170P1Q96L14 293 aa19.37■□□□□ 0.69
SMG6-212ENST00000573153 TMEM117Q9H0C3 514 aa19.37■□□□□ 0.69
SMG6-212ENST00000573153 ZSWIM4Q9H7M6 989 aa19.37■□□□□ 0.69
SMG6-212ENST00000573153 TTC12Q9H892 705 aaPredicted RBP19.37■□□□□ 0.69
SMG6-212ENST00000573153 LRFN2Q9ULH4 789 aa19.37■□□□□ 0.69
SMG6-212ENST00000573153 MEIS3P2A8K0S8 358 aa19.36■□□□□ 0.69
SMG6-212ENST00000573153 DKC1O60832 514 aaKnown RBP eCLIP19.36■□□□□ 0.69
SMG6-212ENST00000573153 BAG4O95429 457 aaKnown RBP19.36■□□□□ 0.69
SMG6-212ENST00000573153 KCNA5P22460 613 aa19.36■□□□□ 0.69
SMG6-212ENST00000573153 RHPN2Q8IUC4 686 aa19.36■□□□□ 0.69
SMG6-212ENST00000573153 C4orf32Q8N8J7 132 aa19.36■□□□□ 0.69
SMG6-212ENST00000573153 COLGALT1Q8NBJ5 622 aa19.36■□□□□ 0.69
SMG6-212ENST00000573153 POF1BQ8WVV4 589 aa19.36■□□□□ 0.69
SMG6-212ENST00000573153 KHSRPQ92945 711 aaKnown RBP eCLIP19.36■□□□□ 0.69
SMG6-212ENST00000573153 TMEM143Q96AN5 459 aa19.36■□□□□ 0.69
SMG6-212ENST00000573153 C8orf76Q96K31 380 aa19.36■□□□□ 0.69
SMG6-212ENST00000573153 GCOM2Q9BZD3 368 aaPredicted RBP19.36■□□□□ 0.69
SMG6-212ENST00000573153 ATP6V0A4Q9HBG4 840 aa19.36■□□□□ 0.69
SMG6-212ENST00000573153 BMP2KQ9NSY1 1161 aaPredicted RBP19.36■□□□□ 0.69
SMG6-212ENST00000573153 COL4A3BPQ9Y5P4 624 aa19.36■□□□□ 0.69
SMG6-212ENST00000573153 LINC01565O15544 149 aa19.35■□□□□ 0.69
SMG6-212ENST00000573153 TBX10O75333 385 aa19.35■□□□□ 0.69
SMG6-212ENST00000573153 IL9P15248 144 aa19.35■□□□□ 0.69
SMG6-212ENST00000573153 IBSPP21815 317 aaPredicted RBP19.35■□□□□ 0.69
SMG6-212ENST00000573153 HOXA11P31270 313 aaPredicted RBP19.35■□□□□ 0.69
SMG6-212ENST00000573153 RFC5P40937 340 aa19.35■□□□□ 0.69
SMG6-212ENST00000573153 EMC2Q15006 297 aa19.35■□□□□ 0.69
SMG6-212ENST00000573153 SAFBQ15424 915 aaKnown RBP eCLIP19.35■□□□□ 0.69
SMG6-212ENST00000573153 PRPF31Q8WWY3 499 aaKnown RBP19.35■□□□□ 0.69
SMG6-212ENST00000573153 FOXP1Q9H334 677 aaPredicted RBP19.35■□□□□ 0.69
SMG6-212ENST00000573153 UPF2Q9HAU5 1272 aaKnown RBP19.35■□□□□ 0.69
SMG6-212ENST00000573153 CHST12Q9NRB3 414 aa19.35■□□□□ 0.69
SMG6-212ENST00000573153 PCDHA12Q9UN75 941 aa19.35■□□□□ 0.69
SMG6-212ENST00000573153 H3BQ06 376 aaPredicted RBP19.34■□□□□ 0.69
SMG6-212ENST00000573153 FSCN2O14926 492 aa19.34■□□□□ 0.69
SMG6-212ENST00000573153 ST18O60284 1047 aa19.34■□□□□ 0.69
SMG6-212ENST00000573153 TXKP42681 527 aa19.34■□□□□ 0.69
SMG6-212ENST00000573153 PHKA2P46019 1235 aa19.34■□□□□ 0.69
SMG6-212ENST00000573153 TOB1P50616 345 aaPredicted RBP19.34■□□□□ 0.69
SMG6-212ENST00000573153 CDC42EP1Q00587 391 aa19.34■□□□□ 0.69
SMG6-212ENST00000573153 ORC2Q13416 577 aaPredicted RBP19.34■□□□□ 0.69
SMG6-212ENST00000573153 UBXN11Q5T124 520 aa19.34■□□□□ 0.69
SMG6-212ENST00000573153 FERMT3Q86UX7 667 aa19.34■□□□□ 0.69
SMG6-212ENST00000573153 NLRP4Q96MN2 994 aa19.34■□□□□ 0.69
SMG6-212ENST00000573153 TBC1D32Q96NH3 1257 aa19.34■□□□□ 0.69
SMG6-212ENST00000573153 JPH2Q9BR39 696 aaPredicted RBP19.34■□□□□ 0.69
SMG6-212ENST00000573153 AGPAT5Q9NUQ2 364 aa19.34■□□□□ 0.69
SMG6-212ENST00000573153 A0A087WWV3 80 aa19.33■□□□□ 0.68
SMG6-212ENST00000573153 B4GALT3O60512 393 aa19.33■□□□□ 0.68
SMG6-212ENST00000573153 MED24O75448 989 aa19.33■□□□□ 0.68
SMG6-212ENST00000573153 CSPG5O95196 566 aa19.33■□□□□ 0.68
SMG6-212ENST00000573153 GLP2RO95838 553 aa19.33■□□□□ 0.68
SMG6-212ENST00000573153 U2AF2P26368 475 aaKnown RBP eCLIP19.33■□□□□ 0.68
SMG6-212ENST00000573153 MCM7P33993 719 aa19.33■□□□□ 0.68
SMG6-212ENST00000573153 PBX3P40426 434 aa19.33■□□□□ 0.68
SMG6-212ENST00000573153 RARRES1P49788 294 aa19.33■□□□□ 0.68
SMG6-212ENST00000573153 LAMTOR4Q0VGL1 99 aa19.33■□□□□ 0.68
SMG6-212ENST00000573153 NBR1Q14596 966 aa19.33■□□□□ 0.68
SMG6-212ENST00000573153 XKR9Q5GH70 373 aa19.33■□□□□ 0.68
SMG6-212ENST00000573153 IFNLR1Q8IU57 520 aaPredicted RBP19.33■□□□□ 0.68
SMG6-212ENST00000573153 TPH2Q8IWU9 490 aa19.33■□□□□ 0.68
SMG6-212ENST00000573153 ASAP3Q8TDY4 903 aa19.33■□□□□ 0.68
SMG6-212ENST00000573153 SLC7A3Q8WY07 619 aa19.33■□□□□ 0.68
SMG6-212ENST00000573153 ANKEF1Q9NU02 776 aa19.33■□□□□ 0.68
SMG6-212ENST00000573153 RNF216Q9NWF9 866 aaPredicted RBP19.33■□□□□ 0.68
SMG6-212ENST00000573153 GRXCR2A6NFK2 248 aa19.32■□□□□ 0.68
SMG6-212ENST00000573153 FGF18O76093 207 aa19.32■□□□□ 0.68
SMG6-212ENST00000573153 EOMESO95936 686 aa19.32■□□□□ 0.68
SMG6-212ENST00000573153 ZSCAN20P17040 1043 aaPredicted RBP19.32■□□□□ 0.68
SMG6-212ENST00000573153 SFPQP23246 707 aaKnown RBP eCLIP19.32■□□□□ 0.68
SMG6-212ENST00000573153 DNM2P50570 870 aa19.32■□□□□ 0.68
SMG6-212ENST00000573153 POLGP54098 1239 aaPredicted RBP19.32■□□□□ 0.68
SMG6-212ENST00000573153 ERVFC1P60507 584 aa19.32■□□□□ 0.68
SMG6-212ENST00000573153 PLCB3Q01970 1234 aa19.32■□□□□ 0.68
SMG6-212ENST00000573153 ADAM15Q13444 863 aa19.32■□□□□ 0.68
SMG6-212ENST00000573153 AMHR2Q16671 573 aa19.32■□□□□ 0.68
SMG6-212ENST00000573153 CATSPER3Q86XQ3 398 aa19.32■□□□□ 0.68
SMG6-212ENST00000573153 NOSTRINQ8IVI9 506 aa19.32■□□□□ 0.68
SMG6-212ENST00000573153 EXOC8Q8IYI6 725 aa19.32■□□□□ 0.68
SMG6-212ENST00000573153 HELQQ8TDG4 1101 aa19.32■□□□□ 0.68
SMG6-212ENST00000573153 PSPC1Q8WXF1 523 aaKnown RBP19.32■□□□□ 0.68
SMG6-212ENST00000573153 LPPQ93052 612 aa19.32■□□□□ 0.68
SMG6-212ENST00000573153 MSLNLQ96KJ4 702 aa19.32■□□□□ 0.68
SMG6-212ENST00000573153 SCLT1Q96NL6 688 aa19.32■□□□□ 0.68
SMG6-212ENST00000573153 GAS2O43903 313 aaKnown RBP19.31■□□□□ 0.68
SMG6-212ENST00000573153 MARCH6O60337 910 aa19.31■□□□□ 0.68
SMG6-212ENST00000573153 ZNF623O75123 536 aa19.31■□□□□ 0.68
SMG6-212ENST00000573153 ARL2P36404 184 aa19.31■□□□□ 0.68
SMG6-212ENST00000573153 MCM2P49736 904 aa19.31■□□□□ 0.68
SMG6-212ENST00000573153 UBE3AQ05086 875 aa19.31■□□□□ 0.68
SMG6-212ENST00000573153 CAPSQ13938 189 aa19.31■□□□□ 0.68
SMG6-212ENST00000573153 KCNC3Q14003 757 aa19.31■□□□□ 0.68
SMG6-212ENST00000573153 ZNF174Q15697 407 aa19.31■□□□□ 0.68
SMG6-212ENST00000573153 SRGAP1Q7Z6B7 1085 aa19.31■□□□□ 0.68
SMG6-212ENST00000573153 TMEM173Q86WV6 379 aaPredicted RBP19.31■□□□□ 0.68
SMG6-212ENST00000573153 FAM178BQ8IXR5 827 aa19.31■□□□□ 0.68
SMG6-212ENST00000573153 LRRC43Q8N309 656 aa19.31■□□□□ 0.68
SMG6-212ENST00000573153 VN1R2Q8NFZ6 395 aa19.31■□□□□ 0.68
SMG6-212ENST00000573153 PIGOQ8TEQ8 1089 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms