RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 SEL1LQ9UBV2 794 aa12.19□□□□□ -0.46
RPAIN-212ENST00000573126 SCAF8Q9UPN6 1271 aaKnown RBP12.19□□□□□ -0.46
RPAIN-212ENST00000573126 STXBP5LQ9Y2K9 1186 aa12.19□□□□□ -0.46
RPAIN-212ENST00000573126 MRPL11Q9Y3B7 192 aaKnown RBP12.19□□□□□ -0.46
RPAIN-212ENST00000573126 NR2E1Q9Y466 385 aa12.19□□□□□ -0.46
RPAIN-212ENST00000573126 TTI1O43156 1089 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 DAPK3O43293 454 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 LMNB1P20700 586 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 FLT3P36888 993 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 GUCY1A3Q02108 690 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 MAPK7Q13164 816 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 GRIPAP1Q4V328 841 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 STXBP4Q6ZWJ1 553 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 KCTD17Q8N5Z5 321 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 C7orf43Q8WVR3 580 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 RFFLQ8WZ73 363 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 HES6Q96HZ4 224 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 CALR3Q96L12 384 aaKnown RBP12.18□□□□□ -0.46
RPAIN-212ENST00000573126 RNPC3Q96LT9 517 aaKnown RBP12.18□□□□□ -0.46
RPAIN-212ENST00000573126 THAP2Q9H0W7 228 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 INTUQ9ULD6 942 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 ODF2LQ9ULJ1 636 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 SAMM50Q9Y512 469 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 FOXN3O00409 490 aaPredicted RBP12.18□□□□□ -0.46
RPAIN-212ENST00000573126 COPB2P35606 906 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 HSD17B3P37058 310 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 HSPA9P38646 679 aaKnown RBP12.18□□□□□ -0.46
RPAIN-212ENST00000573126 SKOR1P84550 965 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 TRAF1Q13077 416 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 NFIL3Q16649 462 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 PADI6Q6TGC4 694 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 FLAD1Q8NFF5 587 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 IL31RAQ8NI17 732 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 TRIM31Q9BZY9 425 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 VCPKMTQ9H867 229 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 ZNF70Q9UC06 446 aaPredicted RBP12.18□□□□□ -0.46
RPAIN-212ENST00000573126 AMFRQ9UKV5 643 aa12.18□□□□□ -0.46
RPAIN-212ENST00000573126 PLSCR1O15162 318 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 NR1D1P20393 614 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 HPDP32754 393 aaPredicted RBP12.17□□□□□ -0.46
RPAIN-212ENST00000573126 SETQ01105 290 aaPredicted RBP12.17□□□□□ -0.46
RPAIN-212ENST00000573126 CUL1Q13616 776 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 PPP2R5AQ15172 486 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 DLGAP5Q15398 846 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 DCAF12L1Q5VU92 463 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 RASGEF1CQ8N431 466 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 SLC20A1Q8WUM9 679 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 CNKSR1Q969H4 720 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 SYT11Q9BT88 431 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 DPH5Q9H2P9 285 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 EHMT1Q9H9B1 1298 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 KCNH7Q9NS40 1196 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 CHORDC1Q9UHD1 332 aaPredicted RBP12.17□□□□□ -0.46
RPAIN-212ENST00000573126 SYNPO2Q9UMS6 1093 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 BRWD3Q6RI45 1802 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 TMEM150BA6NC51 233 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 EBAG9O00559 213 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 NFIBO00712 420 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 TMEM253P0C7T8 217 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 CTNNA1P35221 906 aaKnown RBP12.17□□□□□ -0.46
RPAIN-212ENST00000573126 CORO7P57737 925 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 ZNF211Q13398 564 aaPredicted RBP12.17□□□□□ -0.46
RPAIN-212ENST00000573126 UAP1Q16222 522 aaPredicted RBP12.17□□□□□ -0.46
RPAIN-212ENST00000573126 B3GNT9Q6UX72 402 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 ZSWIM2Q8NEG5 633 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 ATP6V1G3Q96LB4 118 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 CBWD1Q9BRT8 395 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 COL20A1Q9P218 1284 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 COG5Q9UP83 839 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 EMSYQ7Z589 1322 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 CCDC188H7C350 402 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 NDUFAB1O14561 156 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 PPP1R37O75864 691 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 TNFAIP3P21580 790 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 GUCY2CP25092 1073 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 GCLMP48507 274 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 NPEPPSP55786 919 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 MIER3Q7Z3K6 550 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 FAM151AQ8WW52 585 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 MXRA8Q9BRK3 442 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 TRIM51Q9BSJ1 452 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 UBE2TQ9NPD8 197 aaPredicted RBP12.17□□□□□ -0.46
RPAIN-212ENST00000573126 HOMER2Q9NSB8 354 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 KCND2Q9NZV8 630 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 CCPG1Q9ULG6 757 aa12.17□□□□□ -0.46
RPAIN-212ENST00000573126 CNTNAP1P78357 1384 aa12.16□□□□□ -0.46
RPAIN-212ENST00000573126 UBE4BO95155 1302 aa12.16□□□□□ -0.46
RPAIN-212ENST00000573126 PPP3CAQ08209 521 aa12.16□□□□□ -0.46
RPAIN-212ENST00000573126 ZNF746Q6NUN9 644 aaPredicted RBP12.16□□□□□ -0.46
RPAIN-212ENST00000573126 KDM7AQ6ZMT4 941 aa12.16□□□□□ -0.46
RPAIN-212ENST00000573126 CD302Q8IX05 232 aa12.16□□□□□ -0.46
RPAIN-212ENST00000573126 CPXCR1Q8N123 301 aa12.16□□□□□ -0.46
RPAIN-212ENST00000573126 OGFOD1Q8N543 542 aa12.16□□□□□ -0.46
RPAIN-212ENST00000573126 LMO3Q8TAP4 145 aa12.16□□□□□ -0.46
RPAIN-212ENST00000573126 UBLCP1Q8WVY7 318 aaPredicted RBP12.16□□□□□ -0.46
RPAIN-212ENST00000573126 TMOD4Q9NZQ9 345 aa12.16□□□□□ -0.46
RPAIN-212ENST00000573126 ZHX2Q9Y6X8 837 aa12.16□□□□□ -0.46
RPAIN-212ENST00000573126 NCANO14594 1321 aa12.16□□□□□ -0.46
RPAIN-212ENST00000573126 GOLGA6L10A6NI86 522 aa12.16□□□□□ -0.46
RPAIN-212ENST00000573126 KRT13P13646 458 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms