RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 A0A0U1RQF3 1178 aa23.26■■□□□ 1.31
CHRNB1-204ENST00000572857 GRXCR2A6NFK2 248 aa23.26■■□□□ 1.31
CHRNB1-204ENST00000572857 WNT7AO00755 349 aa23.26■■□□□ 1.31
CHRNB1-204ENST00000572857 ZBTB39O15060 712 aa23.26■■□□□ 1.31
CHRNB1-204ENST00000572857 FGF18O76093 207 aa23.26■■□□□ 1.31
CHRNB1-204ENST00000572857 SFPQP23246 707 aaKnown RBP eCLIP23.26■■□□□ 1.31
CHRNB1-204ENST00000572857 CLUL1Q15846 466 aa23.26■■□□□ 1.31
CHRNB1-204ENST00000572857 PUS10Q3MIT2 529 aaKnown RBP23.26■■□□□ 1.31
CHRNB1-204ENST00000572857 XKR9Q5GH70 373 aa23.26■■□□□ 1.31
CHRNB1-204ENST00000572857 OTUD6AQ7L8S5 288 aa23.26■■□□□ 1.31
CHRNB1-204ENST00000572857 PPP2R3CQ969Q6 453 aa23.26■■□□□ 1.31
CHRNB1-204ENST00000572857 INO80BQ9C086 356 aaPredicted RBP23.26■■□□□ 1.31
CHRNB1-204ENST00000572857 CWH43Q9H720 699 aa23.26■■□□□ 1.31
CHRNB1-204ENST00000572857 PCDHGC5Q9Y5F6 944 aa23.26■■□□□ 1.31
CHRNB1-204ENST00000572857 MUC3AQ02505 3323 aa23.26■■□□□ 1.31
CHRNB1-204ENST00000572857 LINC01565O15544 149 aa23.25■■□□□ 1.31
CHRNB1-204ENST00000572857 LTBRP36941 435 aa23.25■■□□□ 1.31
CHRNB1-204ENST00000572857 TXKP42681 527 aa23.25■■□□□ 1.31
CHRNB1-204ENST00000572857 DLX2Q07687 328 aaPredicted RBP23.25■■□□□ 1.31
CHRNB1-204ENST00000572857 SAFBQ15424 915 aaKnown RBP eCLIP23.25■■□□□ 1.31
CHRNB1-204ENST00000572857 CTC1Q2NKJ3 1217 aa23.25■■□□□ 1.31
CHRNB1-204ENST00000572857 LRRC55Q6ZSA7 311 aa23.25■■□□□ 1.31
CHRNB1-204ENST00000572857 CATSPER4Q7RTX7 472 aa23.25■■□□□ 1.31
CHRNB1-204ENST00000572857 ADGRD2Q7Z7M1 963 aa23.25■■□□□ 1.31
CHRNB1-204ENST00000572857 RBM23Q86U06 439 aaKnown RBP23.25■■□□□ 1.31
CHRNB1-204ENST00000572857 PRPF31Q8WWY3 499 aaKnown RBP23.25■■□□□ 1.31
CHRNB1-204ENST00000572857 EIF2AK1Q9BQI3 630 aaKnown RBP23.25■■□□□ 1.31
CHRNB1-204ENST00000572857 TTC12Q9H892 705 aaPredicted RBP23.25■■□□□ 1.31
CHRNB1-204ENST00000572857 CHST12Q9NRB3 414 aa23.25■■□□□ 1.31
CHRNB1-204ENST00000572857 PIN4Q9Y237 131 aaKnown RBP23.25■■□□□ 1.31
CHRNB1-204ENST00000572857 COL4A3BPQ9Y5P4 624 aa23.25■■□□□ 1.31
CHRNB1-204ENST00000572857 NEMFO60524 1076 aa23.24■■□□□ 1.31
CHRNB1-204ENST00000572857 SLITRK3O94933 977 aa23.24■■□□□ 1.31
CHRNB1-204ENST00000572857 SRGAP2CP0DJJ0 459 aa23.24■■□□□ 1.31
CHRNB1-204ENST00000572857 LAG3P18627 525 aa23.24■■□□□ 1.31
CHRNB1-204ENST00000572857 RFC5P40937 340 aa23.24■■□□□ 1.31
CHRNB1-204ENST00000572857 CLLU1OSQ5K130 101 aa23.24■■□□□ 1.31
CHRNB1-204ENST00000572857 TWF2Q6IBS0 349 aaKnown RBP23.24■■□□□ 1.31
CHRNB1-204ENST00000572857 FAM178BQ8IXR5 827 aa23.24■■□□□ 1.31
CHRNB1-204ENST00000572857 EXOC8Q8IYI6 725 aa23.24■■□□□ 1.31
CHRNB1-204ENST00000572857 HELQQ8TDG4 1101 aa23.24■■□□□ 1.31
CHRNB1-204ENST00000572857 C8orf76Q96K31 380 aa23.24■■□□□ 1.31
CHRNB1-204ENST00000572857 DHX33Q9H6R0 707 aaKnown RBP23.24■■□□□ 1.31
CHRNB1-204ENST00000572857 CD320Q9NPF0 282 aa23.24■■□□□ 1.31
CHRNB1-204ENST00000572857 WDR81Q562E7 1941 aa23.23■■□□□ 1.31
CHRNB1-204ENST00000572857 EOMESO95936 686 aa23.23■■□□□ 1.31
CHRNB1-204ENST00000572857 SSTR3P32745 418 aaPredicted RBP23.23■■□□□ 1.31
CHRNB1-204ENST00000572857 NRIP1P48552 1158 aa23.23■■□□□ 1.31
CHRNB1-204ENST00000572857 CSPP1Q1MSJ5 1256 aa23.23■■□□□ 1.31
CHRNB1-204ENST00000572857 LONRF3Q496Y0 759 aa23.23■■□□□ 1.31
CHRNB1-204ENST00000572857 C8orf34Q49A92 452 aa23.23■■□□□ 1.31
CHRNB1-204ENST00000572857 ZNF598Q86UK7 904 aaKnown RBP23.23■■□□□ 1.31
CHRNB1-204ENST00000572857 LRRC43Q8N309 656 aa23.23■■□□□ 1.31
CHRNB1-204ENST00000572857 PSPC1Q8WXF1 523 aaKnown RBP23.23■■□□□ 1.31
CHRNB1-204ENST00000572857 PPME1Q9Y570 386 aa23.23■■□□□ 1.31
CHRNB1-204ENST00000572857 ATF7P17544 494 aaPredicted RBP23.22■■□□□ 1.31
CHRNB1-204ENST00000572857 MCM7P33993 719 aa23.22■■□□□ 1.31
CHRNB1-204ENST00000572857 PBX3P40426 434 aa23.22■■□□□ 1.31
CHRNB1-204ENST00000572857 UBE3AQ05086 875 aa23.22■■□□□ 1.31
CHRNB1-204ENST00000572857 LAMTOR4Q0VGL1 99 aa23.22■■□□□ 1.31
CHRNB1-204ENST00000572857 ADAM15Q13444 863 aa23.22■■□□□ 1.31
CHRNB1-204ENST00000572857 EMC2Q15006 297 aa23.22■■□□□ 1.31
CHRNB1-204ENST00000572857 KCNT2Q6UVM3 1135 aa23.22■■□□□ 1.31
CHRNB1-204ENST00000572857 GJD3Q8N144 294 aa23.22■■□□□ 1.31
CHRNB1-204ENST00000572857 ZSCAN31Q96LW9 406 aaPredicted RBP23.22■■□□□ 1.31
CHRNB1-204ENST00000572857 KIF2CQ99661 725 aa23.22■■□□□ 1.31
CHRNB1-204ENST00000572857 LLPHQ9BRT6 129 aaKnown RBP23.22■■□□□ 1.31
CHRNB1-204ENST00000572857 EPHX3Q9H6B9 360 aa23.22■■□□□ 1.31
CHRNB1-204ENST00000572857 TLE6Q9H808 572 aa23.22■■□□□ 1.31
CHRNB1-204ENST00000572857 IFT122Q9HBG6 1241 aa23.22■■□□□ 1.31
CHRNB1-204ENST00000572857 TLR9Q9NR96 1032 aa23.22■■□□□ 1.31
CHRNB1-204ENST00000572857 FAM50BQ9Y247 325 aa23.22■■□□□ 1.31
CHRNB1-204ENST00000572857 TBX10O75333 385 aa23.21■■□□□ 1.31
CHRNB1-204ENST00000572857 PHKA2P46019 1235 aa23.21■■□□□ 1.31
CHRNB1-204ENST00000572857 NDUFV1P49821 464 aa23.21■■□□□ 1.31
CHRNB1-204ENST00000572857 ERVFC1P60507 584 aa23.21■■□□□ 1.31
CHRNB1-204ENST00000572857 TCP11Q8WWU5 503 aa23.21■■□□□ 1.31
CHRNB1-204ENST00000572857 LPPQ93052 612 aa23.21■■□□□ 1.31
CHRNB1-204ENST00000572857 ZNF558Q96NG5 402 aa23.21■■□□□ 1.31
CHRNB1-204ENST00000572857 MTMR9Q96QG7 549 aa23.21■■□□□ 1.31
CHRNB1-204ENST00000572857 HSD17B14Q9BPX1 270 aa23.21■■□□□ 1.31
CHRNB1-204ENST00000572857 TMEM60Q9H2L4 133 aa23.21■■□□□ 1.31
CHRNB1-204ENST00000572857 PUF60Q9UHX1 559 aaKnown RBP23.21■■□□□ 1.31
CHRNB1-204ENST00000572857 PER2O15055 1255 aa23.2■■□□□ 1.3
CHRNB1-204ENST00000572857 KHSRPQ92945 711 aaKnown RBP eCLIP23.2■■□□□ 1.3
CHRNB1-204ENST00000572857 A0A087WWV3 80 aa23.19■■□□□ 1.3
CHRNB1-204ENST00000572857 SKIP12755 728 aa23.19■■□□□ 1.3
CHRNB1-204ENST00000572857 SRGAP1Q7Z6B7 1085 aa23.19■■□□□ 1.3
CHRNB1-204ENST00000572857 FERMT3Q86UX7 667 aa23.19■■□□□ 1.3
CHRNB1-204ENST00000572857 EFHBQ8N7U6 833 aa23.19■■□□□ 1.3
CHRNB1-204ENST00000572857 FAM184AQ8NB25 1140 aa23.19■■□□□ 1.3
CHRNB1-204ENST00000572857 RNF149Q8NC42 400 aa23.19■■□□□ 1.3
CHRNB1-204ENST00000572857 MRPS27Q92552 414 aaKnown RBP23.19■■□□□ 1.3
CHRNB1-204ENST00000572857 CCDC43Q96MW1 224 aaKnown RBP23.19■■□□□ 1.3
CHRNB1-204ENST00000572857 MTRQ99707 1265 aa23.19■■□□□ 1.3
CHRNB1-204ENST00000572857 C1QTNF1Q9BXJ1 281 aa23.19■■□□□ 1.3
CHRNB1-204ENST00000572857 MINDY3Q9H8M7 445 aa23.19■■□□□ 1.3
CHRNB1-204ENST00000572857 SH2B1Q9NRF2 756 aaPredicted RBP23.19■■□□□ 1.3
CHRNB1-204ENST00000572857 FAM105AQ9NUU6 356 aa23.19■■□□□ 1.3
CHRNB1-204ENST00000572857 SPG21Q9NZD8 308 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms