RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 PCDHA12Q9UN75 941 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 MTMR6Q9Y217 621 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 TRIOO75962 3097 aa9.71□□□□□ -0.85
SMG6-210ENST00000572205 RFXAPO00287 272 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 DGKIO75912 1065 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 EDN1P05305 212 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 ATP2B1P20020 1258 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 POU3F3P20264 500 aaPredicted RBP9.71□□□□□ -0.86
SMG6-210ENST00000572205 SYT1P21579 422 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 FGFR4P22455 802 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 RPA1P27694 616 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 PRPHP41219 470 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 KCNJ6P48051 423 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 GATMP50440 423 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 NLRP11P59045 1033 aaKnown RBP9.71□□□□□ -0.86
SMG6-210ENST00000572205 ERVK-21P61565 698 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 TBC1D8BQ0IIM8 1120 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 PAK2Q13177 524 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 PTPAQ15257 358 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 HYIQ5T013 277 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 RSPH3Q86UC2 560 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 ZNF598Q86UK7 904 aaKnown RBP9.71□□□□□ -0.86
SMG6-210ENST00000572205 ASAP3Q8TDY4 903 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 TNPO1Q92973 898 aaKnown RBP9.71□□□□□ -0.86
SMG6-210ENST00000572205 CLP1Q92989 425 aaKnown RBP9.71□□□□□ -0.86
SMG6-210ENST00000572205 PHOX2BQ99453 314 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 RAD9AQ99638 391 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 TUFT1Q9NNX1 390 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 NRBP2Q9NSY0 501 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 HCSTQ9UBK5 93 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 TCEAL9Q9UHQ7 104 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 ST3GAL5Q9UNP4 418 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 SMC3Q9UQE7 1217 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 PPME1Q9Y570 386 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 ADGRA3Q8IWK6 1321 aa9.71□□□□□ -0.86
SMG6-210ENST00000572205 A0A087WZ62 844 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 DDX11L8A8MPP1 907 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 TLL1O43897 1013 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 CSDE1O75534 798 aaKnown RBP9.7□□□□□ -0.86
SMG6-210ENST00000572205 AMHP03971 560 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 EIF4BP23588 611 aaKnown RBP9.7□□□□□ -0.86
SMG6-210ENST00000572205 ARL2P36404 184 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 RFC5P40937 340 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 TECP42680 631 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 FAM189BP81408 668 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 MAPK7Q13164 816 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 CAPSQ13938 189 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 RILPL1Q5EBL4 403 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 FAM117BQ6P1L5 589 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 DAW1Q8N136 415 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 METTL13Q8N6R0 699 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 PIGOQ8TEQ8 1089 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 BSNDQ8WZ55 320 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 TMEM143Q96AN5 459 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 CEP170P1Q96L14 293 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 PNMA5Q96PV4 448 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 FDXACB1Q9BRP7 624 aaPredicted RBP9.7□□□□□ -0.86
SMG6-210ENST00000572205 C17orf80Q9BSJ5 609 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 RGS18Q9NS28 235 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 ANKEF1Q9NU02 776 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 DBR1Q9UK59 544 aaKnown RBP9.7□□□□□ -0.86
SMG6-210ENST00000572205 AKT3Q9Y243 479 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.7□□□□□ -0.86
SMG6-210ENST00000572205 VWA8A3KMH1 1905 aa9.7□□□□□ -0.86
SMG6-210ENST00000572205 MEIS3P2A8K0S8 358 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 CITO14578 2027 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 B4GALT3O60512 393 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 RPS6KA5O75582 802 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 BAG4O95429 457 aaKnown RBP9.69□□□□□ -0.86
SMG6-210ENST00000572205 GLRA2P23416 452 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 CDC25AP30304 524 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 HOXA11P31270 313 aaPredicted RBP9.69□□□□□ -0.86
SMG6-210ENST00000572205 SARSP49591 514 aaKnown RBP9.69□□□□□ -0.86
SMG6-210ENST00000572205 TSC2P49815 1807 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 GRB10Q13322 594 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 PKP1Q13835 747 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 TMEM119Q4V9L6 283 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 UBXN11Q5T124 520 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 CDCA2Q69YH5 1023 aaPredicted RBP9.69□□□□□ -0.86
SMG6-210ENST00000572205 FAM173BQ6P4H8 233 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 DENND4AQ7Z401 1863 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 FERMT3Q86UX7 667 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 ZNF410Q86VK4 478 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 NPAS4Q8IUM7 802 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 GDPD5Q8WTR4 605 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 PRPF31Q8WWY3 499 aaKnown RBP9.69□□□□□ -0.86
SMG6-210ENST00000572205 MAP7D2Q96T17 732 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 TRAIPQ9BWF2 469 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 FTHL17Q9BXU8 183 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 CERS4Q9HA82 394 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 SUGCTQ9HAC7 445 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 SLC28A3Q9HAS3 691 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 GPRC5CQ9NQ84 441 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 AGPAT5Q9NUQ2 364 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 SUCLA2Q9P2R7 463 aaPredicted RBP9.69□□□□□ -0.86
SMG6-210ENST00000572205 MSRAQ9UJ68 235 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 GINS2Q9Y248 185 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 COL4A3BPQ9Y5P4 624 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 MTCH2Q9Y6C9 303 aa9.69□□□□□ -0.86
SMG6-210ENST00000572205 MORC2Q9Y6X9 1032 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms