RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 ZBP1Q9H171 429 aa21.67■■□□□ 1.06
NUP88-203ENST00000572019 DISC1Q9NRI5 854 aa21.67■■□□□ 1.06
NUP88-203ENST00000572019 NR2E1Q9Y466 385 aa21.67■■□□□ 1.06
NUP88-203ENST00000572019 WDR64B1ANS9 1081 aa21.66■■□□□ 1.06
NUP88-203ENST00000572019 STBD1O95210 358 aa21.66■■□□□ 1.06
NUP88-203ENST00000572019 CXCL14O95715 111 aa21.66■■□□□ 1.06
NUP88-203ENST00000572019 TARBP2Q15633 366 aaKnown RBP21.66■■□□□ 1.06
NUP88-203ENST00000572019 TSGA10IPQ3SY00 556 aa21.66■■□□□ 1.06
NUP88-203ENST00000572019 TPRNQ4KMQ1 711 aa21.66■■□□□ 1.06
NUP88-203ENST00000572019 RNF20Q5VTR2 975 aa21.66■■□□□ 1.06
NUP88-203ENST00000572019 VPS52Q8N1B4 723 aa21.66■■□□□ 1.06
NUP88-203ENST00000572019 FAM167AQ96KS9 214 aa21.66■■□□□ 1.06
NUP88-203ENST00000572019 UNC45AQ9H3U1 944 aa21.66■■□□□ 1.06
NUP88-203ENST00000572019 LIMD1Q9UGP4 676 aa21.66■■□□□ 1.06
NUP88-203ENST00000572019 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.65■■□□□ 1.06
NUP88-203ENST00000572019 ZC3H11AO75152 810 aaKnown RBP eCLIP21.65■■□□□ 1.06
NUP88-203ENST00000572019 ITIH3Q06033 890 aa21.65■■□□□ 1.06
NUP88-203ENST00000572019 CES5AQ6NT32 575 aa21.65■■□□□ 1.06
NUP88-203ENST00000572019 SLC22A17Q8WUG5 538 aa21.65■■□□□ 1.06
NUP88-203ENST00000572019 NLRP7Q8WX94 980 aa21.65■■□□□ 1.06
NUP88-203ENST00000572019 SCLT1Q96NL6 688 aa21.65■■□□□ 1.06
NUP88-203ENST00000572019 C6orf50Q9HD87 102 aa21.65■■□□□ 1.06
NUP88-203ENST00000572019 EOMESO95936 686 aa21.64■■□□□ 1.05
NUP88-203ENST00000572019 TMOD1P28289 359 aa21.64■■□□□ 1.05
NUP88-203ENST00000572019 UBALD2Q8IYN6 164 aa21.64■■□□□ 1.05
NUP88-203ENST00000572019 NECTIN4Q96NY8 510 aa21.64■■□□□ 1.05
NUP88-203ENST00000572019 NRDE2Q9H7Z3 1164 aa21.64■■□□□ 1.05
NUP88-203ENST00000572019 DNAJB4Q9UDY4 337 aa21.64■■□□□ 1.05
NUP88-203ENST00000572019 TCEAL9Q9UHQ7 104 aa21.64■■□□□ 1.05
NUP88-203ENST00000572019 A0A087WZ62 844 aa21.63■■□□□ 1.05
NUP88-203ENST00000572019 PROB1E7EW31 1015 aa21.63■■□□□ 1.05
NUP88-203ENST00000572019 PHKA2P46019 1235 aa21.63■■□□□ 1.05
NUP88-203ENST00000572019 RCAN1P53805 252 aa21.63■■□□□ 1.05
NUP88-203ENST00000572019 TBC1D8BQ0IIM8 1120 aa21.63■■□□□ 1.05
NUP88-203ENST00000572019 NTRK3Q16288 839 aa21.63■■□□□ 1.05
NUP88-203ENST00000572019 MTERF2Q49AM1 385 aa21.63■■□□□ 1.05
NUP88-203ENST00000572019 KIAA1841Q6NSI8 718 aa21.63■■□□□ 1.05
NUP88-203ENST00000572019 TMC5Q6UXY8 1006 aa21.63■■□□□ 1.05
NUP88-203ENST00000572019 Q6ZUG5 572 aa21.63■■□□□ 1.05
NUP88-203ENST00000572019 KSR1Q8IVT5 923 aa21.63■■□□□ 1.05
NUP88-203ENST00000572019 SLC5A5Q92911 643 aa21.63■■□□□ 1.05
NUP88-203ENST00000572019 TMEM169Q96HH4 297 aa21.63■■□□□ 1.05
NUP88-203ENST00000572019 CCDC136Q96JN2 1154 aa21.63■■□□□ 1.05
NUP88-203ENST00000572019 FDXACB1Q9BRP7 624 aaPredicted RBP21.63■■□□□ 1.05
NUP88-203ENST00000572019 NRBP2Q9NSY0 501 aa21.63■■□□□ 1.05
NUP88-203ENST00000572019 TBC1D13Q9NVG8 400 aa21.63■■□□□ 1.05
NUP88-203ENST00000572019 VPS54Q9P1Q0 977 aa21.63■■□□□ 1.05
NUP88-203ENST00000572019 NID2Q14112 1375 aa21.62■■□□□ 1.05
NUP88-203ENST00000572019 PRPF3O43395 683 aaKnown RBP21.62■■□□□ 1.05
NUP88-203ENST00000572019 MTHFRP42898 656 aa21.62■■□□□ 1.05
NUP88-203ENST00000572019 ALDH7A1P49419 539 aaKnown RBP21.62■■□□□ 1.05
NUP88-203ENST00000572019 AFF1P51825 1210 aaKnown RBP21.62■■□□□ 1.05
NUP88-203ENST00000572019 CWF19L1Q69YN2 538 aaKnown RBP21.62■■□□□ 1.05
NUP88-203ENST00000572019 TDRD5Q8NAT2 981 aaKnown RBP21.62■■□□□ 1.05
NUP88-203ENST00000572019 BRF1Q92994 677 aa21.62■■□□□ 1.05
NUP88-203ENST00000572019 IGSF21Q96ID5 467 aa21.62■■□□□ 1.05
NUP88-203ENST00000572019 SEPT9Q9UHD8 586 aaPredicted RBP21.62■■□□□ 1.05
NUP88-203ENST00000572019 INPP5FQ9Y2H2 1132 aa21.62■■□□□ 1.05
NUP88-203ENST00000572019 DCHS1Q96JQ0 3298 aa21.62■■□□□ 1.05
NUP88-203ENST00000572019 DOCK8Q8NF50 2099 aa21.61■■□□□ 1.05
NUP88-203ENST00000572019 PRR23AA6NEV1 266 aa21.61■■□□□ 1.05
NUP88-203ENST00000572019 GAS7O60861 476 aa21.61■■□□□ 1.05
NUP88-203ENST00000572019 GALTP07902 379 aa21.61■■□□□ 1.05
NUP88-203ENST00000572019 CTSAP10619 480 aa21.61■■□□□ 1.05
NUP88-203ENST00000572019 SLC11A1P49279 550 aa21.61■■□□□ 1.05
NUP88-203ENST00000572019 LRCH2Q5VUJ6 765 aa21.61■■□□□ 1.05
NUP88-203ENST00000572019 ZNF280BQ86YH2 543 aa21.61■■□□□ 1.05
NUP88-203ENST00000572019 ZDHHC14Q8IZN3 488 aa21.61■■□□□ 1.05
NUP88-203ENST00000572019 MRPL9Q9BYD2 267 aaKnown RBP21.61■■□□□ 1.05
NUP88-203ENST00000572019 DACT1Q9NYF0 836 aa21.61■■□□□ 1.05
NUP88-203ENST00000572019 DBR1Q9UK59 544 aaKnown RBP21.61■■□□□ 1.05
NUP88-203ENST00000572019 IGKV6-21A0A0C4DH24 114 aa21.6■■□□□ 1.05
NUP88-203ENST00000572019 PI15O43692 258 aa21.6■■□□□ 1.05
NUP88-203ENST00000572019 OFD1O75665 1012 aa21.6■■□□□ 1.05
NUP88-203ENST00000572019 PSMD10O75832 226 aa21.6■■□□□ 1.05
NUP88-203ENST00000572019 BMP2KLQ5H9B9 411 aa21.6■■□□□ 1.05
NUP88-203ENST00000572019 ASTLQ6HA08 431 aaPredicted RBP21.6■■□□□ 1.05
NUP88-203ENST00000572019 TWF2Q6IBS0 349 aaKnown RBP21.6■■□□□ 1.05
NUP88-203ENST00000572019 B3GNT9Q6UX72 402 aa21.6■■□□□ 1.05
NUP88-203ENST00000572019 DDX53Q86TM3 631 aaKnown RBP21.6■■□□□ 1.05
NUP88-203ENST00000572019 RIT2Q99578 217 aa21.6■■□□□ 1.05
NUP88-203ENST00000572019 NIFKQ9BYG3 293 aaKnown RBP21.6■■□□□ 1.05
NUP88-203ENST00000572019 GBP3Q9H0R5 595 aa21.6■■□□□ 1.05
NUP88-203ENST00000572019 IRAK3Q9Y616 596 aa21.6■■□□□ 1.05
NUP88-203ENST00000572019 TDP2O95551 362 aa21.59■■□□□ 1.05
NUP88-203ENST00000572019 NPR3P17342 541 aa21.59■■□□□ 1.05
NUP88-203ENST00000572019 GNA11P29992 359 aa21.59■■□□□ 1.05
NUP88-203ENST00000572019 NBL1P41271 181 aa21.59■■□□□ 1.05
NUP88-203ENST00000572019 PTPN14Q15678 1187 aa21.59■■□□□ 1.05
NUP88-203ENST00000572019 ATAT1Q5SQI0 421 aa21.59■■□□□ 1.05
NUP88-203ENST00000572019 FRMD5Q7Z6J6 570 aa21.59■■□□□ 1.05
NUP88-203ENST00000572019 DOCK6Q96HP0 2047 aa21.59■■□□□ 1.05
NUP88-203ENST00000572019 TEKT3Q9BXF9 490 aa21.59■■□□□ 1.05
NUP88-203ENST00000572019 GCOM2Q9BZD3 368 aaPredicted RBP21.59■■□□□ 1.05
NUP88-203ENST00000572019 IRF2BPLQ9H1B7 796 aa21.59■■□□□ 1.05
NUP88-203ENST00000572019 NCOA5Q9HCD5 579 aaKnown RBP21.59■■□□□ 1.05
NUP88-203ENST00000572019 FAM105AQ9NUU6 356 aa21.59■■□□□ 1.05
NUP88-203ENST00000572019 PIN4Q9Y237 131 aaKnown RBP21.59■■□□□ 1.05
NUP88-203ENST00000572019 GVINP1Q7Z2Y8 2422 aa21.59■■□□□ 1.05
NUP88-203ENST00000572019 DDHD2O94830 711 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms