RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 AXDND1Q5T1B0 1012 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC1-203ENST00000571739 FAM117BQ6P1L5 589 aa9.66□□□□□ -0.86
TRAPPC1-203ENST00000571739 IFNLR1Q8IU57 520 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC1-203ENST00000571739 MYOCDQ8IZQ8 938 aa9.66□□□□□ -0.86
TRAPPC1-203ENST00000571739 KCTD17Q8N5Z5 321 aa9.66□□□□□ -0.86
TRAPPC1-203ENST00000571739 SYT2Q8N9I0 419 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC1-203ENST00000571739 RNF149Q8NC42 400 aa9.66□□□□□ -0.86
TRAPPC1-203ENST00000571739 BSNDQ8WZ55 320 aa9.66□□□□□ -0.86
TRAPPC1-203ENST00000571739 ADAM2Q99965 735 aa9.66□□□□□ -0.86
TRAPPC1-203ENST00000571739 RUSC1Q9BVN2 902 aa9.66□□□□□ -0.86
TRAPPC1-203ENST00000571739 FTHL17Q9BXU8 183 aa9.66□□□□□ -0.86
TRAPPC1-203ENST00000571739 TSPYL2Q9H2G4 693 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC1-203ENST00000571739 NKX2-4Q9H2Z4 354 aa9.66□□□□□ -0.86
TRAPPC1-203ENST00000571739 SEMA6BQ9H3T3 888 aa9.66□□□□□ -0.86
TRAPPC1-203ENST00000571739 RGS18Q9NS28 235 aa9.66□□□□□ -0.86
TRAPPC1-203ENST00000571739 PCDHA11Q9Y5I1 949 aa9.66□□□□□ -0.86
TRAPPC1-203ENST00000571739 RANBP2P49792 3224 aaKnown RBP9.66□□□□□ -0.86
TRAPPC1-203ENST00000571739 TTC3P53804 2025 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 MICAL3Q7RTP6 2002 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 A0A087X0B3 334 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 SFI1A8K8P3 1242 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 SLC26A4O43511 780 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 YEATS4O95619 227 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 PLA2G4BP0C869 781 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 PLCG1P19174 1290 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 HOXA11P31270 313 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 HTRA4P83105 476 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 CAPSQ13938 189 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 MXD4Q14582 209 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 NAALADL2Q58DX5 795 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 FAM102BQ5T8I3 360 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 ATL3Q6DD88 541 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 SPRED2Q7Z698 418 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 SRGAP1Q7Z6B7 1085 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 DAW1Q8N136 415 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 KRI1Q8N9T8 703 aaKnown RBP9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 MCPH1Q8NEM0 835 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 SYMPKQ92797 1274 aaKnown RBP9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 TIFAQ96CG3 184 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 RAD9AQ99638 391 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 PANK2Q9BZ23 570 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 INO80BQ9C086 356 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 NT5C3AQ9H0P0 336 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 POLR3FQ9H1D9 316 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 MSRAQ9UJ68 235 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 PCDHA7Q9UN72 937 aa9.65□□□□□ -0.86
TRAPPC1-203ENST00000571739 ARID2Q68CP9 1835 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 NPHP3-ACAD11A0A0J9YXS1 232 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 TLL1O43897 1013 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 CA3P07451 260 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 MAPK7Q13164 816 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 MCM6Q14566 821 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 RAB30Q15771 203 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 AMHR2Q16671 573 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 ODR4Q5SWX8 454 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 SHC4Q6S5L8 630 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 FAM43BQ6ZT52 329 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 SLC24A5Q71RS6 500 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 ZNF689Q96CS4 500 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 CALML4Q96GE6 196 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 CCDC43Q96MW1 224 aaKnown RBP9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 FAM161BQ96MY7 647 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 SCLT1Q96NL6 688 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 ZBED2Q9BTP6 218 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 NFKBIZQ9BYH8 718 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 ZNF576Q9H609 170 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 CHST12Q9NRB3 414 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 MTMR10Q9NXD2 777 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 CFAP45Q9UL16 551 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 INSL6Q9Y581 213 aa9.64□□□□□ -0.87
TRAPPC1-203ENST00000571739 A0A0U1RQF3 1178 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 DENND3A2RUS2 1198 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 TTLL13PA6NNM8 815 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 CUTAO60888 179 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 HIP1RO75146 1068 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 DGKIO75912 1065 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 SSBP05455 408 aaKnown RBP eCLIP9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 ZSCAN20P17040 1043 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 GUCY2CP25092 1073 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 SARSP49591 514 aaKnown RBP9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 GATMP50440 423 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 TAP1Q03518 808 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 MBTD1Q05BQ5 628 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 RAD51AP2Q09MP3 1159 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 TFDP1Q14186 410 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 DHX8Q14562 1220 aaKnown RBP9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 GRIN2CQ14957 1233 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 UBXN11Q5T124 520 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 CATSPER4Q7RTX7 472 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 DEFB123Q8N688 67 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 SP7Q8TDD2 431 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 RAD54LQ92698 747 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 CDK5RAP3Q96JB5 506 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 GUCD1Q96NT3 240 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 NTPCRQ9BSD7 190 aaKnown RBP9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 TRAIPQ9BWF2 469 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 FZD8Q9H461 694 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 SLC28A3Q9HAS3 691 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 RC3H2Q9HBD1 1191 aaKnown RBP9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 C1orf112Q9NSG2 853 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms