RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 PKD2L1Q9P0L9 805 aa15.35■□□□□ 0.05
RPAIN-209ENST00000571558 LRWD1Q9UFC0 647 aa15.35■□□□□ 0.05
RPAIN-209ENST00000571558 PLAGL2Q9UPG8 496 aa15.35■□□□□ 0.05
RPAIN-209ENST00000571558 NRCAMQ92823 1304 aa15.35■□□□□ 0.05
RPAIN-209ENST00000571558 MYO7AQ13402 2215 aa15.35■□□□□ 0.05
RPAIN-209ENST00000571558 A0A1B0GVL5 298 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 EML1O00423 815 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 CDC25AP30304 524 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 NDUFA8P51970 172 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 SIGLEC14Q08ET2 396 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 TCF15Q12870 199 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 SNW1Q13573 536 aaKnown RBP15.34■□□□□ 0.05
RPAIN-209ENST00000571558 METTL7BQ6UX53 244 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 RSPH3Q86UC2 560 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 FMR1NBQ8N0W7 255 aaPredicted RBP15.34■□□□□ 0.05
RPAIN-209ENST00000571558 TEKT3Q9BXF9 490 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 RAB34Q9BZG1 259 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 CCSER1Q9C0I3 900 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 UNC45AQ9H3U1 944 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 IGFLR1Q9H665 355 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 SETD4Q9NVD3 440 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 A0A087X0B3 334 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 ENPP3O14638 875 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 GFRA3O60609 400 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 DGKIO75912 1065 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 CCNE2O96020 404 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 CAMK1Q14012 370 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 OSBPL7Q9BZF2 842 aa15.34■□□□□ 0.05
RPAIN-209ENST00000571558 NR1I2O75469 434 aa15.33■□□□□ 0.04
RPAIN-209ENST00000571558 MBD3O95983 291 aa15.33■□□□□ 0.04
RPAIN-209ENST00000571558 CHRNA1P02708 482 aa15.33■□□□□ 0.04
RPAIN-209ENST00000571558 KRT76Q01546 638 aa15.33■□□□□ 0.04
RPAIN-209ENST00000571558 FAM160A1Q05DH4 1040 aa15.33■□□□□ 0.04
RPAIN-209ENST00000571558 TPRNQ4KMQ1 711 aa15.33■□□□□ 0.04
RPAIN-209ENST00000571558 NCAPH2Q6IBW4 605 aa15.33■□□□□ 0.04
RPAIN-209ENST00000571558 ZNF746Q6NUN9 644 aaPredicted RBP15.33■□□□□ 0.04
RPAIN-209ENST00000571558 CMTR2Q8IYT2 770 aaKnown RBP15.33■□□□□ 0.04
RPAIN-209ENST00000571558 GIMAP8Q8ND71 665 aaPredicted RBP15.33■□□□□ 0.04
RPAIN-209ENST00000571558 GPR20Q99678 358 aa15.33■□□□□ 0.04
RPAIN-209ENST00000571558 SDF4Q9BRK5 362 aa15.33■□□□□ 0.04
RPAIN-209ENST00000571558 PHF7Q9BWX1 381 aaPredicted RBP15.33■□□□□ 0.04
RPAIN-209ENST00000571558 ALG13Q9NP73 1137 aaKnown RBP15.33■□□□□ 0.04
RPAIN-209ENST00000571558 FAM13BQ9NYF5 915 aa15.33■□□□□ 0.04
RPAIN-209ENST00000571558 CLEC1BQ9P126 229 aa15.33■□□□□ 0.04
RPAIN-209ENST00000571558 KCNH3Q9ULD8 1083 aa15.33■□□□□ 0.04
RPAIN-209ENST00000571558 TELO2Q9Y4R8 837 aa15.33■□□□□ 0.04
RPAIN-209ENST00000571558 CACNA1HO95180 2353 aa15.32■□□□□ 0.04
RPAIN-209ENST00000571558 ZDBF2Q9HCK1 2354 aa15.32■□□□□ 0.04
RPAIN-209ENST00000571558 LINC01565O15544 149 aa15.32■□□□□ 0.04
RPAIN-209ENST00000571558 SLC26A4O43511 780 aa15.32■□□□□ 0.04
RPAIN-209ENST00000571558 SPATA31C1P0DKV0 1188 aa15.32■□□□□ 0.04
RPAIN-209ENST00000571558 ATF7P17544 494 aaPredicted RBP15.32■□□□□ 0.04
RPAIN-209ENST00000571558 GTF2F1P35269 517 aaKnown RBP eCLIP15.32■□□□□ 0.04
RPAIN-209ENST00000571558 CACNB1Q02641 598 aaPredicted RBP15.32■□□□□ 0.04
RPAIN-209ENST00000571558 E2F4Q16254 413 aa15.32■□□□□ 0.04
RPAIN-209ENST00000571558 KLHL40Q2TBA0 621 aa15.32■□□□□ 0.04
RPAIN-209ENST00000571558 HYIQ5T013 277 aa15.32■□□□□ 0.04
RPAIN-209ENST00000571558 CCDC73Q6ZRK6 1079 aa15.32■□□□□ 0.04
RPAIN-209ENST00000571558 CABP7Q86V35 215 aa15.32■□□□□ 0.04
RPAIN-209ENST00000571558 LMBR1Q8WVP7 490 aa15.32■□□□□ 0.04
RPAIN-209ENST00000571558 HSD17B14Q9BPX1 270 aa15.32■□□□□ 0.04
RPAIN-209ENST00000571558 FTHL17Q9BXU8 183 aa15.32■□□□□ 0.04
RPAIN-209ENST00000571558 RNF39Q9H2S5 420 aa15.32■□□□□ 0.04
RPAIN-209ENST00000571558 JPH1Q9HDC5 661 aaPredicted RBP15.32■□□□□ 0.04
RPAIN-209ENST00000571558 SLC9A2Q9UBY0 812 aa15.32■□□□□ 0.04
RPAIN-209ENST00000571558 SQORQ9Y6N5 450 aa15.32■□□□□ 0.04
RPAIN-209ENST00000571558 DDX39AO00148 427 aaKnown RBP15.31■□□□□ 0.04
RPAIN-209ENST00000571558 TRAK2O60296 914 aa15.31■□□□□ 0.04
RPAIN-209ENST00000571558 SORBS3O60504 671 aa15.31■□□□□ 0.04
RPAIN-209ENST00000571558 ATG7O95352 703 aa15.31■□□□□ 0.04
RPAIN-209ENST00000571558 UBA7P41226 1012 aa15.31■□□□□ 0.04
RPAIN-209ENST00000571558 KARSQ15046 597 aaKnown RBP15.31■□□□□ 0.04
RPAIN-209ENST00000571558 EPHA7Q15375 998 aa15.31■□□□□ 0.04
RPAIN-209ENST00000571558 CYFIP1Q7L576 1253 aa15.31■□□□□ 0.04
RPAIN-209ENST00000571558 RDM1Q8NG50 284 aa15.31■□□□□ 0.04
RPAIN-209ENST00000571558 SPPL3Q8TCT6 385 aa15.31■□□□□ 0.04
RPAIN-209ENST00000571558 LRRC15Q8TF66 581 aa15.31■□□□□ 0.04
RPAIN-209ENST00000571558 PNMA5Q96PV4 448 aa15.31■□□□□ 0.04
RPAIN-209ENST00000571558 EIF2AK1Q9BQI3 630 aaKnown RBP15.31■□□□□ 0.04
RPAIN-209ENST00000571558 POLR3CQ9BUI4 534 aaPredicted RBP15.31■□□□□ 0.04
RPAIN-209ENST00000571558 DACT1Q9NYF0 836 aa15.31■□□□□ 0.04
RPAIN-209ENST00000571558 PROB1E7EW31 1015 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 CHMP2AO43633 222 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 MED24O75448 989 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 GHRP10912 638 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 RPA1P27694 616 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 AVPR2P30518 371 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 SFNP31947 248 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 SYKP43405 635 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 JAK3P52333 1124 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 ACTR2P61160 394 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 LPIN1Q14693 890 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 ECM1Q16610 540 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 SKOR2Q2VWA4 1001 aaPredicted RBP15.3■□□□□ 0.04
RPAIN-209ENST00000571558 TMEM119Q4V9L6 283 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 KRT79Q5XKE5 535 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 ABHD15Q6UXT9 468 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 TSHZ1Q6ZSZ6 1077 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 MIER3Q7Z3K6 550 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 CATSPER3Q86XQ3 398 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms