RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 PCDHA7Q9UN72 937 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 USP20Q9Y2K6 914 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 STXBP5LQ9Y2K9 1186 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 PPME1Q9Y570 386 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 SLC4A7Q9Y6M7 1214 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 KIAA1671Q9BY89 1806 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 FNDC1Q4ZHG4 1894 aaPredicted RBP7.77□□□□□ -1.17
SMG6-209ENST00000571442 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.76□□□□□ -1.17
SMG6-209ENST00000571442 ABHD14A-ACY1A0A1B0GW23 586 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.76□□□□□ -1.17
SMG6-209ENST00000571442 SFI1A8K8P3 1242 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 HIP1RO75146 1068 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 PPP6R2O75170 966 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 BAIAP3O94812 1187 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 PLA2G4BP0C869 781 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 ACTN1P12814 892 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 ATP2A2P16615 1042 aaKnown RBP7.76□□□□□ -1.17
SMG6-209ENST00000571442 ATF7P17544 494 aaPredicted RBP7.76□□□□□ -1.17
SMG6-209ENST00000571442 TMOD1P28289 359 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 UBA7P41226 1012 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 SMAD3P84022 425 aaKnown RBP7.76□□□□□ -1.17
SMG6-209ENST00000571442 RAD51AP2Q09MP3 1159 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 IKBKEQ14164 716 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 DHX8Q14562 1220 aaKnown RBP7.76□□□□□ -1.17
SMG6-209ENST00000571442 AMHR2Q16671 573 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 FAM102BQ5T8I3 360 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 ZNF697Q5TEC3 545 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 ZNF410Q86VK4 478 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 HERC6Q8IVU3 1022 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 MYOCDQ8IZQ8 938 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 SYT2Q8N9I0 419 aaPredicted RBP7.76□□□□□ -1.17
SMG6-209ENST00000571442 KRI1Q8N9T8 703 aaKnown RBP7.76□□□□□ -1.17
SMG6-209ENST00000571442 RNF149Q8NC42 400 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 LEO1Q8WVC0 666 aaPredicted RBP7.76□□□□□ -1.17
SMG6-209ENST00000571442 PSPC1Q8WXF1 523 aaKnown RBP7.76□□□□□ -1.17
SMG6-209ENST00000571442 RAD54LQ92698 747 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 FAM161BQ96MY7 647 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 RAB34Q9BZG1 259 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 NKX2-4Q9H2Z4 354 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 RC3H2Q9HBD1 1191 aaKnown RBP7.76□□□□□ -1.17
SMG6-209ENST00000571442 RNF19AQ9NV58 838 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 HCSTQ9UBK5 93 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 DNM3Q9UQ16 869 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 SQORQ9Y6N5 450 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 UNC80Q8N2C7 3258 aa7.76□□□□□ -1.17
SMG6-209ENST00000571442 EPOPA6NHQ4 379 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 MEIS3P2A8K0S8 358 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 C9IYK1 514 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 B4GALT5O43286 388 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 UPP2O95045 317 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 GJB5O95377 273 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 RPLP2P05387 115 aaKnown RBP7.75□□□□□ -1.17
SMG6-209ENST00000571442 SSBP05455 408 aaKnown RBP eCLIP7.75□□□□□ -1.17
SMG6-209ENST00000571442 LINC00271P0C7V0 271 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 IBSPP21815 317 aaPredicted RBP7.75□□□□□ -1.17
SMG6-209ENST00000571442 DNAJB2P25686 324 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 HOXA11P31270 313 aaPredicted RBP7.75□□□□□ -1.17
SMG6-209ENST00000571442 DNM2P50570 870 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 PTENP60484 403 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 MBTD1Q05BQ5 628 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 E2F4Q16254 413 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 UBXN11Q5T124 520 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 TAS1R3Q7RTX0 852 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 CDR2LQ86X02 465 aaPredicted RBP7.75□□□□□ -1.17
SMG6-209ENST00000571442 IFNLR1Q8IU57 520 aaPredicted RBP7.75□□□□□ -1.17
SMG6-209ENST00000571442 PDILTQ8N807 584 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 USP38Q8NB14 1042 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 TCP11Q8WWU5 503 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 STAMQ92783 540 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 APBB2Q92870 758 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 TOP1MTQ969P6 601 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 CPB2Q96IY4 423 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 CCDC43Q96MW1 224 aaKnown RBP7.75□□□□□ -1.17
SMG6-209ENST00000571442 SCLT1Q96NL6 688 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 SLC9A7Q96T83 725 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 ADAM2Q99965 735 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 JPH2Q9BR39 696 aaPredicted RBP7.75□□□□□ -1.17
SMG6-209ENST00000571442 GCOM2Q9BZD3 368 aaPredicted RBP7.75□□□□□ -1.17
SMG6-209ENST00000571442 TSPYL2Q9H2G4 693 aaPredicted RBP7.75□□□□□ -1.17
SMG6-209ENST00000571442 RBM19Q9Y4C8 960 aaKnown RBP7.75□□□□□ -1.17
SMG6-209ENST00000571442 NLRC5Q86WI3 1866 aa7.75□□□□□ -1.17
SMG6-209ENST00000571442 ATG2AQ2TAZ0 1938 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 COL4A4P53420 1690 aaPredicted RBP7.74□□□□□ -1.17
SMG6-209ENST00000571442 MYMKA6NI61 221 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 GPR182O15218 404 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 GAS2O43903 313 aaKnown RBP7.74□□□□□ -1.17
SMG6-209ENST00000571442 TSPAN1O60635 241 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 CUTAO60888 179 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 CA3P07451 260 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 PDIA4P13667 645 aaKnown RBP7.74□□□□□ -1.17
SMG6-209ENST00000571442 NCLP19338 710 aaKnown RBP7.74□□□□□ -1.17
SMG6-209ENST00000571442 CASP1P29466 404 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 KCNJ6P48051 423 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 HTRA4P83105 476 aaPredicted RBP7.74□□□□□ -1.17
SMG6-209ENST00000571442 GIT2Q14161 759 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 RESP18Q5W5W9 173 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 CDCA2Q69YH5 1023 aaPredicted RBP7.74□□□□□ -1.17
SMG6-209ENST00000571442 SRGAP1Q7Z6B7 1085 aa7.74□□□□□ -1.17
SMG6-209ENST00000571442 ZNF598Q86UK7 904 aaKnown RBP7.74□□□□□ -1.17
SMG6-209ENST00000571442 GPBP1Q86WP2 473 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms