RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 PMS2P54278 862 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 MOXD1Q6UVY6 613 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 C18orf8Q96DM3 657 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 CHMP6Q96FZ7 201 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 GPR88Q9GZN0 384 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 VAV3Q9UKW4 847 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 TMEM110-MUSTN1A8MSY1 372 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 EYA4O95677 639 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 EIF3BP55884 814 aaKnown RBP18.91■□□□□ 0.62
SCARF1-205ENST00000571272 DOK7Q18PE1 504 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 ERMARDQ5T6L9 678 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 JAMLQ86YT9 394 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 RNF25Q96BH1 459 aaPredicted RBP18.91■□□□□ 0.62
SCARF1-205ENST00000571272 AMNQ9BXJ7 453 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 CARD9Q9H257 536 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 ZNF831Q5JPB2 1677 aa18.9■□□□□ 0.62
SCARF1-205ENST00000571272 TBX3O15119 743 aa18.9■□□□□ 0.62
SCARF1-205ENST00000571272 CEP57Q86XR8 500 aa18.9■□□□□ 0.62
SCARF1-205ENST00000571272 NCANO14594 1321 aa18.9■□□□□ 0.62
SCARF1-205ENST00000571272 KIF13BQ9NQT8 1826 aa18.9■□□□□ 0.62
SCARF1-205ENST00000571272 TULP1O00294 542 aaPredicted RBP18.9■□□□□ 0.62
SCARF1-205ENST00000571272 BBOX1O75936 387 aa18.9■□□□□ 0.62
SCARF1-205ENST00000571272 SERPINB2P05120 415 aa18.9■□□□□ 0.62
SCARF1-205ENST00000571272 MMEP08473 750 aa18.9■□□□□ 0.62
SCARF1-205ENST00000571272 IFI35P80217 286 aaPredicted RBP18.9■□□□□ 0.62
SCARF1-205ENST00000571272 KLRC3Q07444 240 aa18.9■□□□□ 0.62
SCARF1-205ENST00000571272 SLC29A2Q14542 456 aa18.9■□□□□ 0.62
SCARF1-205ENST00000571272 KIAA1755Q5JYT7 1200 aa18.9■□□□□ 0.62
SCARF1-205ENST00000571272 DENND2CQ68D51 928 aa18.9■□□□□ 0.62
SCARF1-205ENST00000571272 HOOK3Q86VS8 718 aa18.9■□□□□ 0.62
SCARF1-205ENST00000571272 PARP9Q8IXQ6 854 aa18.9■□□□□ 0.62
SCARF1-205ENST00000571272 NEK9Q8TD19 979 aa18.9■□□□□ 0.62
SCARF1-205ENST00000571272 HVCN1Q96D96 273 aa18.9■□□□□ 0.62
SCARF1-205ENST00000571272 FAM20AQ96MK3 541 aa18.9■□□□□ 0.62
SCARF1-205ENST00000571272 SCLT1Q96NL6 688 aa18.9■□□□□ 0.62
SCARF1-205ENST00000571272 AZI2Q9H6S1 392 aa18.9■□□□□ 0.62
SCARF1-205ENST00000571272 CNOT10Q9H9A5 744 aaKnown RBP18.9■□□□□ 0.62
SCARF1-205ENST00000571272 OPLAHO14841 1288 aa18.89■□□□□ 0.61
SCARF1-205ENST00000571272 MARCKSL1P49006 195 aa18.89■□□□□ 0.61
SCARF1-205ENST00000571272 INTS2Q9H0H0 1204 aaKnown RBP18.89■□□□□ 0.61
SCARF1-205ENST00000571272 PABPC3Q9H361 631 aaKnown RBP18.89■□□□□ 0.61
SCARF1-205ENST00000571272 OLFML3Q9NRN5 406 aa18.89■□□□□ 0.61
SCARF1-205ENST00000571272 ALG6Q9Y672 507 aa18.89■□□□□ 0.61
SCARF1-205ENST00000571272 FOXN3O00409 490 aaPredicted RBP18.89■□□□□ 0.61
SCARF1-205ENST00000571272 SREBF1P36956 1147 aa18.89■□□□□ 0.61
SCARF1-205ENST00000571272 SLCO1A2P46721 670 aa18.89■□□□□ 0.61
SCARF1-205ENST00000571272 FBXO11Q86XK2 927 aa18.89■□□□□ 0.61
SCARF1-205ENST00000571272 SLC20A1Q8WUM9 679 aa18.89■□□□□ 0.61
SCARF1-205ENST00000571272 CCT6BQ92526 530 aa18.89■□□□□ 0.61
SCARF1-205ENST00000571272 KRT35Q92764 455 aa18.89■□□□□ 0.61
SCARF1-205ENST00000571272 SYT11Q9BT88 431 aa18.89■□□□□ 0.61
SCARF1-205ENST00000571272 FAM129AQ9BZQ8 928 aa18.89■□□□□ 0.61
SCARF1-205ENST00000571272 PCDHAC2Q9Y5I4 1007 aa18.89■□□□□ 0.61
SCARF1-205ENST00000571272 ATP8B3O60423 1300 aa18.89■□□□□ 0.61
SCARF1-205ENST00000571272 GOLGB1Q14789 3259 aaKnown RBP18.88■□□□□ 0.61
SCARF1-205ENST00000571272 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.88■□□□□ 0.61
SCARF1-205ENST00000571272 ZDHHC24Q6UX98 284 aa18.88■□□□□ 0.61
SCARF1-205ENST00000571272 ARMC9Q7Z3E5 817 aa18.88■□□□□ 0.61
SCARF1-205ENST00000571272 CERKQ8TCT0 537 aa18.88■□□□□ 0.61
SCARF1-205ENST00000571272 NAP1L3Q99457 506 aaPredicted RBP18.88■□□□□ 0.61
SCARF1-205ENST00000571272 SEMA4AQ9H3S1 761 aa18.88■□□□□ 0.61
SCARF1-205ENST00000571272 CXorf56Q9H5V9 222 aa18.88■□□□□ 0.61
SCARF1-205ENST00000571272 UBAP1LF5GYI3 381 aa18.88■□□□□ 0.61
SCARF1-205ENST00000571272 KIAA0391O15091 583 aaKnown RBP18.88■□□□□ 0.61
SCARF1-205ENST00000571272 MAPK7Q13164 816 aa18.88■□□□□ 0.61
SCARF1-205ENST00000571272 SNCBQ16143 134 aa18.88■□□□□ 0.61
SCARF1-205ENST00000571272 CERKLQ49MI3 558 aaPredicted RBP18.88■□□□□ 0.61
SCARF1-205ENST00000571272 PHLDB3Q6NSJ2 640 aa18.88■□□□□ 0.61
SCARF1-205ENST00000571272 SGSM3Q96HU1 749 aa18.88■□□□□ 0.61
SCARF1-205ENST00000571272 DYDC2Q96IM9 177 aa18.88■□□□□ 0.61
SCARF1-205ENST00000571272 A1CFQ9NQ94 594 aaKnown RBP18.88■□□□□ 0.61
SCARF1-205ENST00000571272 CTTNBP2NLQ9P2B4 639 aa18.88■□□□□ 0.61
SCARF1-205ENST00000571272 APEX2Q9UBZ4 518 aa18.88■□□□□ 0.61
SCARF1-205ENST00000571272 FOCADQ5VW36 1801 aa18.88■□□□□ 0.61
SCARF1-205ENST00000571272 APOBEC3HQ6NTF7 200 aaKnown RBP18.87■□□□□ 0.61
SCARF1-205ENST00000571272 FAM228AQ86W67 206 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 DCAF4Q8WV16 495 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 CCDC17Q96LX7 622 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 POLR3CQ9BUI4 534 aaPredicted RBP18.87■□□□□ 0.61
SCARF1-205ENST00000571272 PARVGQ9HBI0 331 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.87■□□□□ 0.615e-8■■■■■ 167.7
SCARF1-205ENST00000571272 FRMD4BQ9Y2L6 1034 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 ANKRD62A6NC57 917 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 F5H6K3 240 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 RGS16O15492 202 aaPredicted RBP18.87■□□□□ 0.61
SCARF1-205ENST00000571272 GAP43P17677 238 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 VCAM1P19320 739 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 ZNF746Q6NUN9 644 aaPredicted RBP18.87■□□□□ 0.61
SCARF1-205ENST00000571272 HS2ST1Q7LGA3 356 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 SIAH1Q8IUQ4 282 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 MTFR1LQ9H019 292 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 CCDC113Q9H0I3 377 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 ADAM7Q9H2U9 754 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 TPX2Q9ULW0 747 aaKnown RBP18.87■□□□□ 0.61
SCARF1-205ENST00000571272 DIS3Q9Y2L1 958 aaKnown RBP18.87■□□□□ 0.61
SCARF1-205ENST00000571272 SLITRK3O94933 977 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 GDF11O95390 407 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 NUDT17P0C025 328 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 FGFR4P22455 802 aa18.87■□□□□ 0.61
SCARF1-205ENST00000571272 MKRN4PQ13434 485 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms