RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 TECP42680 631 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 ID4P47928 161 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 STAT5BP51692 787 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 JAK3P52333 1124 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 SF3A1Q15459 793 aaKnown RBP14.9□□□□□ -0.02
CCDC40-205ENST00000571028 FBXO47Q5MNV8 452 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 PDXDC2PQ6P474 469 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 ABHD15Q6UXT9 468 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 MTMR9Q96QG7 549 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 PCYT2Q99447 389 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 CDCA3Q99618 268 aaPredicted RBP14.9□□□□□ -0.02
CCDC40-205ENST00000571028 SMARCAD1Q9H4L7 1026 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 ZNF302Q9NR11 478 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 AAASQ9NRG9 546 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 TFIP11Q9UBB9 837 aaKnown RBP14.9□□□□□ -0.02
CCDC40-205ENST00000571028 NR2E1Q9Y466 385 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 PCDHGC5Q9Y5F6 944 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 PCDHA10Q9Y5I2 948 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 CLIC4Q9Y696 253 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 CDY2AQ9Y6F7 541 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 MYO7AQ13402 2215 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 PDGFBP01127 241 aaPredicted RBP14.89□□□□□ -0.03
CCDC40-205ENST00000571028 RPLP2P05387 115 aaKnown RBP14.89□□□□□ -0.03
CCDC40-205ENST00000571028 CD52P31358 61 aa14.89□□□□□ -0.03
CCDC40-205ENST00000571028 ADAM17P78536 824 aa14.89□□□□□ -0.03
CCDC40-205ENST00000571028 UBE3AQ05086 875 aa14.89□□□□□ -0.03
CCDC40-205ENST00000571028 MGAT3Q09327 533 aa14.89□□□□□ -0.03
CCDC40-205ENST00000571028 MTMR3Q13615 1198 aa14.89□□□□□ -0.03
CCDC40-205ENST00000571028 FAM160B1Q5W0V3 765 aa14.89□□□□□ -0.03
CCDC40-205ENST00000571028 CCDC60Q8IWA6 550 aaPredicted RBP14.89□□□□□ -0.03
CCDC40-205ENST00000571028 SMAP1Q8IYB5 467 aaPredicted RBP14.89□□□□□ -0.03
CCDC40-205ENST00000571028 C4orf32Q8N8J7 132 aa14.89□□□□□ -0.03
CCDC40-205ENST00000571028 DNAJB3Q8WWF6 145 aa14.89□□□□□ -0.03
CCDC40-205ENST00000571028 SUSD6Q92537 303 aa14.89□□□□□ -0.03
CCDC40-205ENST00000571028 NKD2Q969F2 451 aaPredicted RBP14.89□□□□□ -0.03
CCDC40-205ENST00000571028 VAV3Q9UKW4 847 aa14.89□□□□□ -0.03
CCDC40-205ENST00000571028 POTEMA6NI47 508 aa14.88□□□□□ -0.03
CCDC40-205ENST00000571028 ATG7O95352 703 aa14.88□□□□□ -0.03
CCDC40-205ENST00000571028 PDIA4P13667 645 aaKnown RBP14.88□□□□□ -0.03
CCDC40-205ENST00000571028 SFNP31947 248 aa14.88□□□□□ -0.03
CCDC40-205ENST00000571028 NBL1P41271 181 aa14.88□□□□□ -0.03
CCDC40-205ENST00000571028 IGBP1P78318 339 aa14.88□□□□□ -0.03
CCDC40-205ENST00000571028 MRPS6P82932 125 aaKnown RBP14.88□□□□□ -0.03
CCDC40-205ENST00000571028 PAK2Q13177 524 aa14.88□□□□□ -0.03
CCDC40-205ENST00000571028 PPP2R5CQ13362 524 aa14.88□□□□□ -0.03
CCDC40-205ENST00000571028 ORC2Q13416 577 aaPredicted RBP14.88□□□□□ -0.03
CCDC40-205ENST00000571028 GRIK4Q16099 956 aa14.88□□□□□ -0.03
CCDC40-205ENST00000571028 TMEM266Q2M3C6 531 aa14.88□□□□□ -0.03
CCDC40-205ENST00000571028 IER5Q5VY09 327 aa14.88□□□□□ -0.03
CCDC40-205ENST00000571028 UBALD2Q8IYN6 164 aa14.88□□□□□ -0.03
CCDC40-205ENST00000571028 KREMEN2Q8NCW0 462 aa14.88□□□□□ -0.03
CCDC40-205ENST00000571028 ZNF396Q96N95 335 aaPredicted RBP14.88□□□□□ -0.03
CCDC40-205ENST00000571028 FAM49AQ9H0Q0 323 aaPredicted RBP14.88□□□□□ -0.03
CCDC40-205ENST00000571028 MFSD1Q9H3U5 465 aa14.88□□□□□ -0.03
CCDC40-205ENST00000571028 ERAP1Q9NZ08 941 aa14.88□□□□□ -0.03
CCDC40-205ENST00000571028 ZDHHC9Q9Y397 364 aa14.88□□□□□ -0.03
CCDC40-205ENST00000571028 BRD1O95696 1058 aa14.87□□□□□ -0.03
CCDC40-205ENST00000571028 NCLP19338 710 aaKnown RBP14.87□□□□□ -0.03
CCDC40-205ENST00000571028 RBM10P98175 930 aaKnown RBP14.87□□□□□ -0.03
CCDC40-205ENST00000571028 CYP4A11Q02928 519 aa14.87□□□□□ -0.03
CCDC40-205ENST00000571028 CTTNQ14247 550 aaKnown RBP14.87□□□□□ -0.03
CCDC40-205ENST00000571028 UGCGQ16739 394 aa14.87□□□□□ -0.03
CCDC40-205ENST00000571028 PDE12Q6L8Q7 609 aaKnown RBP14.87□□□□□ -0.03
CCDC40-205ENST00000571028 DTHD1Q6ZMT9 781 aa14.87□□□□□ -0.03
CCDC40-205ENST00000571028 THNSL1Q8IYQ7 743 aa14.87□□□□□ -0.03
CCDC40-205ENST00000571028 LINC01599Q8WXQ3 324 aa14.87□□□□□ -0.03
CCDC40-205ENST00000571028 DYDC2Q96IM9 177 aa14.87□□□□□ -0.03
CCDC40-205ENST00000571028 CHAMP1Q96JM3 812 aa14.87□□□□□ -0.03
CCDC40-205ENST00000571028 USP28Q96RU2 1077 aa14.87□□□□□ -0.03
CCDC40-205ENST00000571028 APOL5Q9BWW9 433 aa14.87□□□□□ -0.03
CCDC40-205ENST00000571028 RNF216Q9NWF9 866 aaPredicted RBP14.87□□□□□ -0.03
CCDC40-205ENST00000571028 RGL1Q9NZL6 768 aa14.87□□□□□ -0.03
CCDC40-205ENST00000571028 CEP131Q9UPN4 1083 aa14.87□□□□□ -0.03
CCDC40-205ENST00000571028 SORCS3Q9UPU3 1222 aa14.87□□□□□ -0.03
CCDC40-205ENST00000571028 ATG2AQ2TAZ0 1938 aa14.87□□□□□ -0.03
CCDC40-205ENST00000571028 CACNA1AO00555 2505 aa14.87□□□□□ -0.03
CCDC40-205ENST00000571028 A0A087WWV3 80 aa14.86□□□□□ -0.03
CCDC40-205ENST00000571028 VWA3AA6NCI4 1184 aa14.86□□□□□ -0.03
CCDC40-205ENST00000571028 MARCKSP29966 332 aaPredicted RBP14.86□□□□□ -0.03
CCDC40-205ENST00000571028 ATP2C1P98194 919 aaPredicted RBP14.86□□□□□ -0.03
CCDC40-205ENST00000571028 PLCB4Q15147 1175 aa14.86□□□□□ -0.03
CCDC40-205ENST00000571028 STK38Q15208 465 aa14.86□□□□□ -0.03
CCDC40-205ENST00000571028 EPHA7Q15375 998 aa14.86□□□□□ -0.03
CCDC40-205ENST00000571028 ZRSR1Q15695 479 aaKnown RBP14.86□□□□□ -0.03
CCDC40-205ENST00000571028 DUSP6Q16828 381 aa14.86□□□□□ -0.03
CCDC40-205ENST00000571028 LLGL2Q6P1M3 1020 aa14.86□□□□□ -0.03
CCDC40-205ENST00000571028 FRMD5Q7Z6J6 570 aa14.86□□□□□ -0.03
CCDC40-205ENST00000571028 TPH2Q8IWU9 490 aa14.86□□□□□ -0.03
CCDC40-205ENST00000571028 ADSSL1Q8N142 457 aa14.86□□□□□ -0.03
CCDC40-205ENST00000571028 ATP8B4Q8TF62 1192 aa14.86□□□□□ -0.03
CCDC40-205ENST00000571028 EIF2AK1Q9BQI3 630 aaKnown RBP14.86□□□□□ -0.03
CCDC40-205ENST00000571028 AGO3Q9H9G7 860 aaKnown RBP14.86□□□□□ -0.03
CCDC40-205ENST00000571028 LRWD1Q9UFC0 647 aa14.86□□□□□ -0.03
CCDC40-205ENST00000571028 PCDHB7Q9Y5E2 793 aa14.86□□□□□ -0.03
CCDC40-205ENST00000571028 SQORQ9Y6N5 450 aa14.86□□□□□ -0.03
CCDC40-205ENST00000571028 CACNA1HO95180 2353 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 IGKV6D-21A0A0A0MT36 114 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 DDX11L8A8MPP1 907 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 PP2D1A8MPX8 630 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 FGF18O76093 207 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms