RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 USP30Q70CQ3 517 aa5.69□□□□□ -1.5
NUP88-202ENST00000570937 KANSL1Q7Z3B3 1105 aa5.69□□□□□ -1.5
NUP88-202ENST00000570937 PRRT2Q7Z6L0 340 aaPredicted RBP5.69□□□□□ -1.5
NUP88-202ENST00000570937 THNSL2Q86YJ6 484 aa5.69□□□□□ -1.5
NUP88-202ENST00000570937 PASD1Q8IV76 773 aa5.69□□□□□ -1.5
NUP88-202ENST00000570937 OR2W6PQ8NHA6 318 aa5.69□□□□□ -1.5
NUP88-202ENST00000570937 NEIL1Q96FI4 390 aaPredicted RBP5.69□□□□□ -1.5
NUP88-202ENST00000570937 LMF1Q96S06 567 aa5.69□□□□□ -1.5
NUP88-202ENST00000570937 PTPN18Q99952 460 aa5.69□□□□□ -1.5
NUP88-202ENST00000570937 HAPLN2Q9GZV7 340 aa5.69□□□□□ -1.5
NUP88-202ENST00000570937 OR10A2Q9H208 303 aa5.69□□□□□ -1.5
NUP88-202ENST00000570937 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.69□□□□□ -1.5
NUP88-202ENST00000570937 JADE2Q9NQC1 790 aa5.69□□□□□ -1.5
NUP88-202ENST00000570937 USP36Q9P275 1121 aaKnown RBP5.69□□□□□ -1.5
NUP88-202ENST00000570937 CFDP1Q9UEE9 299 aaPredicted RBP5.69□□□□□ -1.5
NUP88-202ENST00000570937 DENND4BO75064 1496 aaPredicted RBP5.69□□□□□ -1.5
NUP88-202ENST00000570937 CCNB3Q8WWL7 1395 aa5.68□□□□□ -1.5
NUP88-202ENST00000570937 ARHGAP6O43182 974 aa5.68□□□□□ -1.5
NUP88-202ENST00000570937 CD40P25942 277 aa5.68□□□□□ -1.5
NUP88-202ENST00000570937 ADCYAP1R1P41586 468 aa5.68□□□□□ -1.5
NUP88-202ENST00000570937 MAGEA10P43363 369 aaPredicted RBP5.68□□□□□ -1.5
NUP88-202ENST00000570937 MRE11P49959 708 aa5.68□□□□□ -1.5
NUP88-202ENST00000570937 MEOX1P50221 254 aa5.68□□□□□ -1.5
NUP88-202ENST00000570937 RAC3P60763 192 aa5.68□□□□□ -1.5
NUP88-202ENST00000570937 SART3Q15020 963 aaKnown RBP5.68□□□□□ -1.5
NUP88-202ENST00000570937 DHCR24Q15392 516 aa5.68□□□□□ -1.5
NUP88-202ENST00000570937 TBR1Q16650 682 aa5.68□□□□□ -1.5
NUP88-202ENST00000570937 RNF180Q86T96 592 aa5.68□□□□□ -1.5
NUP88-202ENST00000570937 CIR1Q86X95 450 aaPredicted RBP5.68□□□□□ -1.5
NUP88-202ENST00000570937 C7orf31Q8N865 590 aa5.68□□□□□ -1.5
NUP88-202ENST00000570937 TUBGCP5Q96RT8 1024 aa5.68□□□□□ -1.5
NUP88-202ENST00000570937 C1QTNF3Q9BXJ4 246 aa5.68□□□□□ -1.5
NUP88-202ENST00000570937 PITHD1Q9GZP4 211 aaPredicted RBP5.68□□□□□ -1.5
NUP88-202ENST00000570937 KIAA1683Q9H0B3 1180 aa5.68□□□□□ -1.5
NUP88-202ENST00000570937 SLKQ9H2G2 1235 aaPredicted RBP5.68□□□□□ -1.5
NUP88-202ENST00000570937 SMPD4Q9NXE4 827 aa5.68□□□□□ -1.5
NUP88-202ENST00000570937 KCMF1Q9P0J7 381 aa5.68□□□□□ -1.5
NUP88-202ENST00000570937 ARHGAP5Q13017 1502 aa5.68□□□□□ -1.5
NUP88-202ENST00000570937 SCAPERQ9BY12 1400 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 ADGRL1O94910 1474 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 PMS2P1A4D2B8 440 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 PATE3B3GLJ2 98 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 MATN2O00339 956 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 IGSF3O75054 1194 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 STAT5BP51692 787 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 SESN2P58004 480 aaPredicted RBP5.67□□□□□ -1.5
NUP88-202ENST00000570937 ADAM17P78536 824 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 NFKB2Q00653 900 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 NOLC1Q14978 699 aaKnown RBP eCLIP5.67□□□□□ -1.5
NUP88-202ENST00000570937 DGKDQ16760 1214 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 PRAMEF9Q5VWM5 478 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 TIGD7Q6NT04 549 aaPredicted RBP5.67□□□□□ -1.5
NUP88-202ENST00000570937 BMP8AQ7Z5Y6 402 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 FILIP1Q7Z7B0 1213 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 RTKN2Q8IZC4 609 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 ZNF610Q8N9Z0 462 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 OR5AN1Q8NGI8 311 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 CFHR4Q92496 578 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 RTF1Q92541 710 aaKnown RBP5.67□□□□□ -1.5
NUP88-202ENST00000570937 KRTAP3-1Q9BYR8 98 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 CD248Q9HCU0 757 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 SPTLC3Q9NUV7 552 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 SAE1Q9UBE0 346 aaPredicted RBP5.67□□□□□ -1.5
NUP88-202ENST00000570937 NR2E1Q9Y466 385 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 CTDP1Q9Y5B0 961 aaPredicted RBP5.67□□□□□ -1.5
NUP88-202ENST00000570937 ARID4BQ4LE39 1312 aaPredicted RBP5.67□□□□□ -1.5
NUP88-202ENST00000570937 TTC37Q6PGP7 1564 aa5.67□□□□□ -1.5
NUP88-202ENST00000570937 MAGI2Q86UL8 1455 aa5.66□□□□□ -1.5
NUP88-202ENST00000570937 PRPF6O94906 941 aaKnown RBP5.66□□□□□ -1.5
NUP88-202ENST00000570937 FKBP9O95302 570 aa5.66□□□□□ -1.5
NUP88-202ENST00000570937 BPIP17213 487 aa5.66□□□□□ -1.5
NUP88-202ENST00000570937 CR2P20023 1033 aa5.66□□□□□ -1.5
NUP88-202ENST00000570937 STAT3P40763 770 aa5.66□□□□□ -1.5
NUP88-202ENST00000570937 ANTXR2P58335 489 aa5.66□□□□□ -1.5
NUP88-202ENST00000570937 KRTAP10-2P60368 255 aa5.66□□□□□ -1.5
NUP88-202ENST00000570937 HGFACQ04756 655 aa5.66□□□□□ -1.5
NUP88-202ENST00000570937 ADCY2Q08462 1091 aa5.66□□□□□ -1.5
NUP88-202ENST00000570937 KIAA1841Q6NSI8 718 aa5.66□□□□□ -1.5
NUP88-202ENST00000570937 KLHDC10Q6PID8 442 aa5.66□□□□□ -1.5
NUP88-202ENST00000570937 FKBP9P1Q75LS8 142 aa5.66□□□□□ -1.5
NUP88-202ENST00000570937 LEO1Q8WVC0 666 aaPredicted RBP5.66□□□□□ -1.5
NUP88-202ENST00000570937 RPGRQ92834 1020 aaKnown RBP5.66□□□□□ -1.5
NUP88-202ENST00000570937 LPPQ93052 612 aa5.66□□□□□ -1.5
NUP88-202ENST00000570937 NKD2Q969F2 451 aaPredicted RBP5.66□□□□□ -1.5
NUP88-202ENST00000570937 LOXL4Q96JB6 756 aa5.66□□□□□ -1.5
NUP88-202ENST00000570937 GPR101Q96P66 508 aaPredicted RBP5.66□□□□□ -1.5
NUP88-202ENST00000570937 OAZ3Q9UMX2 235 aa5.66□□□□□ -1.5
NUP88-202ENST00000570937 MYO5CQ9NQX4 1742 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 ZNF518AQ6AHZ1 1483 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 PLEKHH2Q8IVE3 1493 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 MAP3K1Q13233 1512 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 EHBP1L1Q8N3D4 1523 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 A0A0A6YYJ9 748 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 MAFGO15525 162 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 CLSTN1O94985 981 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 ADRB1P08588 477 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 LSP1P33241 339 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 MASP1P48740 699 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 IL2P60568 153 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 DUSP8Q13202 625 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms