RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 CYP26B1Q9NR63 512 aa16.9■□□□□ 0.3
RAB40B-203ENST00000570676 TBKBP1A7MCY6 615 aa16.89■□□□□ 0.29
RAB40B-203ENST00000570676 DDX11L8A8MPP1 907 aa16.89■□□□□ 0.29
RAB40B-203ENST00000570676 CSPG5O95196 566 aa16.89■□□□□ 0.29
RAB40B-203ENST00000570676 P4HBP07237 508 aaKnown RBP16.89■□□□□ 0.29
RAB40B-203ENST00000570676 NPEPPSP55786 919 aa16.89■□□□□ 0.29
RAB40B-203ENST00000570676 EPHA7Q15375 998 aa16.89■□□□□ 0.29
RAB40B-203ENST00000570676 NCAPH2Q6IBW4 605 aa16.89■□□□□ 0.29
RAB40B-203ENST00000570676 BRAPQ7Z569 592 aa16.89■□□□□ 0.29
RAB40B-203ENST00000570676 NOSTRINQ8IVI9 506 aa16.89■□□□□ 0.29
RAB40B-203ENST00000570676 C4orf19Q8IY42 314 aa16.89■□□□□ 0.29
RAB40B-203ENST00000570676 SLFN12Q8IYM2 578 aa16.89■□□□□ 0.29
RAB40B-203ENST00000570676 ZNF579Q8NAF0 562 aaKnown RBP16.89■□□□□ 0.29
RAB40B-203ENST00000570676 SPPL3Q8TCT6 385 aa16.89■□□□□ 0.29
RAB40B-203ENST00000570676 SCLT1Q96NL6 688 aa16.89■□□□□ 0.29
RAB40B-203ENST00000570676 ATP6V0A4Q9HBG4 840 aa16.89■□□□□ 0.29
RAB40B-203ENST00000570676 RNF216Q9NWF9 866 aaPredicted RBP16.89■□□□□ 0.29
RAB40B-203ENST00000570676 A0A087WZ62 844 aa16.88■□□□□ 0.29
RAB40B-203ENST00000570676 DKC1O60832 514 aaKnown RBP eCLIP16.88■□□□□ 0.292e-8■■■■■ 48.7
RAB40B-203ENST00000570676 CSDE1O75534 798 aaKnown RBP16.88■□□□□ 0.29
RAB40B-203ENST00000570676 IL9P15248 144 aa16.88■□□□□ 0.29
RAB40B-203ENST00000570676 ATF7P17544 494 aaPredicted RBP16.88■□□□□ 0.29
RAB40B-203ENST00000570676 IRS1P35568 1242 aa16.88■□□□□ 0.29
RAB40B-203ENST00000570676 HYAL1Q12794 435 aa16.88■□□□□ 0.29
RAB40B-203ENST00000570676 CTC1Q2NKJ3 1217 aa16.88■□□□□ 0.29
RAB40B-203ENST00000570676 ZNF598Q86UK7 904 aaKnown RBP16.88■□□□□ 0.29
RAB40B-203ENST00000570676 ZNF410Q86VK4 478 aa16.88■□□□□ 0.29
RAB40B-203ENST00000570676 ECHDC2Q86YB7 292 aa16.88■□□□□ 0.29
RAB40B-203ENST00000570676 FDXACB1Q9BRP7 624 aaPredicted RBP16.88■□□□□ 0.29
RAB40B-203ENST00000570676 TMEM117Q9H0C3 514 aa16.88■□□□□ 0.29
RAB40B-203ENST00000570676 DHX33Q9H6R0 707 aaKnown RBP16.88■□□□□ 0.29
RAB40B-203ENST00000570676 CWH43Q9H720 699 aa16.88■□□□□ 0.29
RAB40B-203ENST00000570676 RGL1Q9NZL6 768 aa16.88■□□□□ 0.29
RAB40B-203ENST00000570676 H3BQ06 376 aaPredicted RBP16.87■□□□□ 0.29
RAB40B-203ENST00000570676 ZSCAN20P17040 1043 aaPredicted RBP16.87■□□□□ 0.29
RAB40B-203ENST00000570676 GTF2F1P35269 517 aaKnown RBP eCLIP16.87■□□□□ 0.29
RAB40B-203ENST00000570676 LTBRP36941 435 aa16.87■□□□□ 0.29
RAB40B-203ENST00000570676 CLLU1OSQ5K130 101 aa16.87■□□□□ 0.29
RAB40B-203ENST00000570676 ADGRD2Q7Z7M1 963 aa16.87■□□□□ 0.29
RAB40B-203ENST00000570676 RHPN2Q8IUC4 686 aa16.87■□□□□ 0.29
RAB40B-203ENST00000570676 KSR1Q8IVT5 923 aa16.87■□□□□ 0.29
RAB40B-203ENST00000570676 COLGALT1Q8NBJ5 622 aa16.87■□□□□ 0.29
RAB40B-203ENST00000570676 POF1BQ8WVV4 589 aa16.87■□□□□ 0.29
RAB40B-203ENST00000570676 DYDC2Q96IM9 177 aa16.87■□□□□ 0.29
RAB40B-203ENST00000570676 CASD1Q96PB1 797 aa16.87■□□□□ 0.29
RAB40B-203ENST00000570676 JPH2Q9BR39 696 aaPredicted RBP16.87■□□□□ 0.29
RAB40B-203ENST00000570676 GCOM2Q9BZD3 368 aaPredicted RBP16.87■□□□□ 0.29
RAB40B-203ENST00000570676 TYW1Q9NV66 732 aaKnown RBP16.87■□□□□ 0.29
RAB40B-203ENST00000570676 CLDND1Q9NY35 253 aa16.87■□□□□ 0.29
RAB40B-203ENST00000570676 SUCLA2Q9P2R7 463 aaPredicted RBP16.87■□□□□ 0.29
RAB40B-203ENST00000570676 PPME1Q9Y570 386 aa16.87■□□□□ 0.29
RAB40B-203ENST00000570676 MARCH6O60337 910 aa16.86■□□□□ 0.29
RAB40B-203ENST00000570676 NEMFO60524 1076 aa16.86■□□□□ 0.29
RAB40B-203ENST00000570676 TBX10O75333 385 aa16.86■□□□□ 0.29
RAB40B-203ENST00000570676 SFPQP23246 707 aaKnown RBP eCLIP16.86■□□□□ 0.29
RAB40B-203ENST00000570676 YWHABP31946 246 aaKnown RBP16.86■□□□□ 0.29
RAB40B-203ENST00000570676 DNM2P50570 870 aa16.86■□□□□ 0.29
RAB40B-203ENST00000570676 CDC42EP1Q00587 391 aa16.86■□□□□ 0.29
RAB40B-203ENST00000570676 CYP4A11Q02928 519 aa16.86■□□□□ 0.29
RAB40B-203ENST00000570676 CTTNQ14247 550 aaKnown RBP16.86■□□□□ 0.29
RAB40B-203ENST00000570676 CALCRLQ16602 461 aa16.86■□□□□ 0.29
RAB40B-203ENST00000570676 FOXD4L6Q3SYB3 417 aaPredicted RBP16.86■□□□□ 0.29
RAB40B-203ENST00000570676 PTCRAQ6ISU1 281 aaPredicted RBP16.86■□□□□ 0.29
RAB40B-203ENST00000570676 FAM173BQ6P4H8 233 aa16.86■□□□□ 0.29
RAB40B-203ENST00000570676 FOXD4L3Q6VB84 417 aaPredicted RBP16.86■□□□□ 0.29
RAB40B-203ENST00000570676 LRRC55Q6ZSA7 311 aa16.86■□□□□ 0.29
RAB40B-203ENST00000570676 LRRC43Q8N309 656 aa16.86■□□□□ 0.29
RAB40B-203ENST00000570676 CEP170P1Q96L14 293 aa16.86■□□□□ 0.29
RAB40B-203ENST00000570676 NLRP4Q96MN2 994 aa16.86■□□□□ 0.29
RAB40B-203ENST00000570676 IFT122Q9HBG6 1241 aa16.86■□□□□ 0.29
RAB40B-203ENST00000570676 ATP6V1DQ9Y5K8 247 aa16.86■□□□□ 0.29
RAB40B-203ENST00000570676 A0A0U1RQF3 1178 aa16.85■□□□□ 0.29
RAB40B-203ENST00000570676 ZBTB39O15060 712 aa16.85■□□□□ 0.29
RAB40B-203ENST00000570676 LINC01565O15544 149 aa16.85■□□□□ 0.29
RAB40B-203ENST00000570676 HOXA2O43364 376 aa16.85■□□□□ 0.29
RAB40B-203ENST00000570676 SLITRK3O94933 977 aa16.85■□□□□ 0.29
RAB40B-203ENST00000570676 BAG4O95429 457 aaKnown RBP16.85■□□□□ 0.29
RAB40B-203ENST00000570676 LAG3P18627 525 aa16.85■□□□□ 0.29
RAB40B-203ENST00000570676 RFC5P40937 340 aa16.85■□□□□ 0.29
RAB40B-203ENST00000570676 POLGP54098 1239 aaPredicted RBP16.85■□□□□ 0.29
RAB40B-203ENST00000570676 DLX2Q07687 328 aaPredicted RBP16.85■□□□□ 0.29
RAB40B-203ENST00000570676 EMC2Q15006 297 aa16.85■□□□□ 0.29
RAB40B-203ENST00000570676 SLC7A3Q8WY07 619 aa16.85■□□□□ 0.29
RAB40B-203ENST00000570676 MTMR9Q96QG7 549 aa16.85■□□□□ 0.29
RAB40B-203ENST00000570676 ZSWIM4Q9H7M6 989 aa16.85■□□□□ 0.29
RAB40B-203ENST00000570676 CD320Q9NPF0 282 aa16.85■□□□□ 0.29
RAB40B-203ENST00000570676 XPNPEP1Q9NQW7 623 aa16.85■□□□□ 0.29
RAB40B-203ENST00000570676 AAASQ9NRG9 546 aa16.85■□□□□ 0.29
RAB40B-203ENST00000570676 BMP2KQ9NSY1 1161 aaPredicted RBP16.85■□□□□ 0.29
RAB40B-203ENST00000570676 DACT1Q9NYF0 836 aa16.85■□□□□ 0.29
RAB40B-203ENST00000570676 NOL7Q9UMY1 257 aaKnown RBP16.85■□□□□ 0.29
RAB40B-203ENST00000570676 PCDHB12Q9Y5F1 795 aa16.85■□□□□ 0.29
RAB40B-203ENST00000570676 PCDHGC5Q9Y5F6 944 aa16.85■□□□□ 0.29
RAB40B-203ENST00000570676 COL4A3BPQ9Y5P4 624 aa16.85■□□□□ 0.29
RAB40B-203ENST00000570676 GRXCR2A6NFK2 248 aa16.84■□□□□ 0.29
RAB40B-203ENST00000570676 NCK2O43639 380 aa16.84■□□□□ 0.29
RAB40B-203ENST00000570676 FGF18O76093 207 aa16.84■□□□□ 0.29
RAB40B-203ENST00000570676 LYPLA2O95372 231 aa16.84■□□□□ 0.29
RAB40B-203ENST00000570676 UBE3AQ05086 875 aa16.84■□□□□ 0.29
RAB40B-203ENST00000570676 SPOUT1Q5T280 376 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms