RNA–Protein interactions for RNA: ENST00000570616.1

SLC12A4-205, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 406 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-205ENST00000570616 C9IYK1 514 aa25.35■■□□□ 1.65
SLC12A4-205ENST00000570616 CSDE1O75534 798 aaKnown RBP25.35■■□□□ 1.65
SLC12A4-205ENST00000570616 F13A1P00488 732 aa25.35■■□□□ 1.65
SLC12A4-205ENST00000570616 STAG3L1P0CL83 205 aa25.35■■□□□ 1.65
SLC12A4-205ENST00000570616 GLRA2P23416 452 aa25.35■■□□□ 1.65
SLC12A4-205ENST00000570616 PHKA2P46019 1235 aa25.35■■□□□ 1.65
SLC12A4-205ENST00000570616 NASPP49321 788 aaPredicted RBP25.35■■□□□ 1.65
SLC12A4-205ENST00000570616 GRIN1Q05586 938 aa25.35■■□□□ 1.65
SLC12A4-205ENST00000570616 GRIN2CQ14957 1233 aa25.35■■□□□ 1.65
SLC12A4-205ENST00000570616 TMEM119Q4V9L6 283 aa25.35■■□□□ 1.65
SLC12A4-205ENST00000570616 CABP7Q86V35 215 aa25.35■■□□□ 1.65
SLC12A4-205ENST00000570616 IFNLR1Q8IU57 520 aaPredicted RBP25.35■■□□□ 1.65
SLC12A4-205ENST00000570616 CDK5RAP3Q96JB5 506 aa25.35■■□□□ 1.65
SLC12A4-205ENST00000570616 PNMA5Q96PV4 448 aa25.35■■□□□ 1.65
SLC12A4-205ENST00000570616 GPRC5CQ9NQ84 441 aa25.35■■□□□ 1.65
SLC12A4-205ENST00000570616 RNF216Q9NWF9 866 aaPredicted RBP25.35■■□□□ 1.65
SLC12A4-205ENST00000570616 FBXO2Q9UK22 296 aaPredicted RBP25.35■■□□□ 1.65
SLC12A4-205ENST00000570616 GBF1Q92538 1859 aa25.34■■□□□ 1.65
SLC12A4-205ENST00000570616 E9PMD0 336 aa25.34■■□□□ 1.65
SLC12A4-205ENST00000570616 ZSCAN20P17040 1043 aaPredicted RBP25.34■■□□□ 1.65
SLC12A4-205ENST00000570616 UBA7P41226 1012 aa25.34■■□□□ 1.65
SLC12A4-205ENST00000570616 CEBPZQ03701 1054 aaKnown RBP25.34■■□□□ 1.65
SLC12A4-205ENST00000570616 GRB10Q13322 594 aa25.34■■□□□ 1.65
SLC12A4-205ENST00000570616 PKP1Q13835 747 aa25.34■■□□□ 1.65
SLC12A4-205ENST00000570616 CAPSQ13938 189 aa25.34■■□□□ 1.65
SLC12A4-205ENST00000570616 SLC39A14Q15043 492 aa25.34■■□□□ 1.65
SLC12A4-205ENST00000570616 ZRSR1Q15695 479 aaKnown RBP25.34■■□□□ 1.65
SLC12A4-205ENST00000570616 MAEAQ7L5Y9 396 aa25.34■■□□□ 1.65
SLC12A4-205ENST00000570616 KCNK18Q7Z418 384 aa25.34■■□□□ 1.65
SLC12A4-205ENST00000570616 ZNF396Q96N95 335 aaPredicted RBP25.34■■□□□ 1.65
SLC12A4-205ENST00000570616 CDX2Q99626 313 aaPredicted RBP25.34■■□□□ 1.65
SLC12A4-205ENST00000570616 RC3H2Q9HBD1 1191 aaKnown RBP25.34■■□□□ 1.65
SLC12A4-205ENST00000570616 CHST12Q9NRB3 414 aa25.34■■□□□ 1.65
SLC12A4-205ENST00000570616 SRPRBQ9Y5M8 271 aaKnown RBP25.34■■□□□ 1.65
SLC12A4-205ENST00000570616 DGKIO75912 1065 aa25.33■■□□□ 1.65
SLC12A4-205ENST00000570616 MARCKSP29966 332 aaPredicted RBP25.33■■□□□ 1.65
SLC12A4-205ENST00000570616 PTENP60484 403 aa25.33■■□□□ 1.65
SLC12A4-205ENST00000570616 FAM102BQ5T8I3 360 aa25.33■■□□□ 1.65
SLC12A4-205ENST00000570616 FOXD4L5Q5VV16 416 aaPredicted RBP25.33■■□□□ 1.65
SLC12A4-205ENST00000570616 CATSPER4Q7RTX7 472 aa25.33■■□□□ 1.65
SLC12A4-205ENST00000570616 FOXD4L4Q8WXT5 416 aaPredicted RBP25.33■■□□□ 1.65
SLC12A4-205ENST00000570616 NFKBIZQ9BYH8 718 aa25.33■■□□□ 1.65
SLC12A4-205ENST00000570616 MINDY3Q9H8M7 445 aa25.33■■□□□ 1.65
SLC12A4-205ENST00000570616 DACT1Q9NYF0 836 aa25.33■■□□□ 1.65
SLC12A4-205ENST00000570616 LOXHD1Q8IVV2 1947 aa25.32■■□□□ 1.64
SLC12A4-205ENST00000570616 LINC01553A4QN01 128 aa25.32■■□□□ 1.64
SLC12A4-205ENST00000570616 FAM189BP81408 668 aa25.32■■□□□ 1.64
SLC12A4-205ENST00000570616 PCBP1Q15365 356 aaKnown RBP eCLIP25.32■■□□□ 1.64
SLC12A4-205ENST00000570616 ZNF689Q96CS4 500 aaPredicted RBP25.32■■□□□ 1.64
SLC12A4-205ENST00000570616 CALML4Q96GE6 196 aa25.32■■□□□ 1.64
SLC12A4-205ENST00000570616 CSRNP2Q9H175 543 aa25.32■■□□□ 1.64
SLC12A4-205ENST00000570616 ELAC1Q9H777 363 aaKnown RBP25.32■■□□□ 1.64
SLC12A4-205ENST00000570616 AGPAT5Q9NUQ2 364 aa25.32■■□□□ 1.64
SLC12A4-205ENST00000570616 LRFN2Q9ULH4 789 aa25.32■■□□□ 1.64
SLC12A4-205ENST00000570616 PCDHB7Q9Y5E2 793 aa25.32■■□□□ 1.64
SLC12A4-205ENST00000570616 ADGRA3Q8IWK6 1321 aa25.32■■□□□ 1.64
SLC12A4-205ENST00000570616 TTC3P53804 2025 aa25.31■■□□□ 1.64
SLC12A4-205ENST00000570616 LINC00301Q8NCQ3 95 aa25.31■■□□□ 1.64
SLC12A4-205ENST00000570616 TRAIPQ9BWF2 469 aa25.31■■□□□ 1.64
SLC12A4-205ENST00000570616 CCSER1Q9C0I3 900 aa25.31■■□□□ 1.64
SLC12A4-205ENST00000570616 TMEM161AQ9NX61 479 aa25.31■■□□□ 1.64
SLC12A4-205ENST00000570616 PIN4Q9Y237 131 aaKnown RBP25.31■■□□□ 1.64
SLC12A4-205ENST00000570616 STXBP5LQ9Y2K9 1186 aa25.31■■□□□ 1.64
SLC12A4-205ENST00000570616 KIFAP3Q92845 792 aa25.3■■□□□ 1.64
SLC12A4-205ENST00000570616 TGS1Q96RS0 853 aaKnown RBP25.3■■□□□ 1.64
SLC12A4-205ENST00000570616 PLIN2Q99541 437 aa25.3■■□□□ 1.64
SLC12A4-205ENST00000570616 RUSC1Q9BVN2 902 aa25.3■■□□□ 1.64
SLC12A4-205ENST00000570616 PRDM12Q9H4Q4 367 aa25.3■■□□□ 1.64
SLC12A4-205ENST00000570616 A0A0U1RQF3 1178 aa25.29■■□□□ 1.64
SLC12A4-205ENST00000570616 LRRIQ4A6NIV6 560 aa25.29■■□□□ 1.64
SLC12A4-205ENST00000570616 ERLIN2O94905 339 aa25.29■■□□□ 1.64
SLC12A4-205ENST00000570616 YEATS4O95619 227 aa25.29■■□□□ 1.64
SLC12A4-205ENST00000570616 ERVK-21P61565 698 aa25.29■■□□□ 1.64
SLC12A4-205ENST00000570616 MBTD1Q05BQ5 628 aa25.29■■□□□ 1.64
SLC12A4-205ENST00000570616 PPP2R5AQ15172 486 aa25.29■■□□□ 1.64
SLC12A4-205ENST00000570616 STK38Q15208 465 aa25.29■■□□□ 1.64
SLC12A4-205ENST00000570616 CDCA2Q69YH5 1023 aaPredicted RBP25.29■■□□□ 1.64
SLC12A4-205ENST00000570616 ATL3Q6DD88 541 aa25.29■■□□□ 1.64
SLC12A4-205ENST00000570616 RINT1Q6NUQ1 792 aa25.29■■□□□ 1.64
SLC12A4-205ENST00000570616 SPRED2Q7Z698 418 aa25.29■■□□□ 1.64
SLC12A4-205ENST00000570616 CMTR2Q8IYT2 770 aaKnown RBP25.29■■□□□ 1.64
SLC12A4-205ENST00000570616 SYT2Q8N9I0 419 aaPredicted RBP25.29■■□□□ 1.64
SLC12A4-205ENST00000570616 KRI1Q8N9T8 703 aaKnown RBP25.29■■□□□ 1.64
SLC12A4-205ENST00000570616 MYLIPQ8WY64 445 aa25.29■■□□□ 1.64
SLC12A4-205ENST00000570616 INO80B-WBP1J3KQ70 363 aa25.28■■□□□ 1.64
SLC12A4-205ENST00000570616 BRD1O95696 1058 aa25.28■■□□□ 1.64
SLC12A4-205ENST00000570616 NAMPTP43490 491 aa25.28■■□□□ 1.64
SLC12A4-205ENST00000570616 SLC12A3P55017 1021 aa25.28■■□□□ 1.64
SLC12A4-205ENST00000570616 C1orf186Q6ZWK4 172 aa25.28■■□□□ 1.64
SLC12A4-205ENST00000570616 ECHDC2Q86YB7 292 aa25.28■■□□□ 1.64
SLC12A4-205ENST00000570616 RASSF8Q8NHQ8 419 aa25.28■■□□□ 1.64
SLC12A4-205ENST00000570616 ARNTL2Q8WYA1 636 aa25.28■■□□□ 1.64
SLC12A4-205ENST00000570616 BSNDQ8WZ55 320 aa25.28■■□□□ 1.64
SLC12A4-205ENST00000570616 SAMD11Q96NU1 681 aa25.28■■□□□ 1.64
SLC12A4-205ENST00000570616 CLIC6Q96NY7 704 aa25.28■■□□□ 1.64
SLC12A4-205ENST00000570616 TIPINQ9BVW5 301 aa25.28■■□□□ 1.64
SLC12A4-205ENST00000570616 KCND2Q9NZV8 630 aa25.28■■□□□ 1.64
SLC12A4-205ENST00000570616 TFIP11Q9UBB9 837 aaKnown RBP25.28■■□□□ 1.64
SLC12A4-205ENST00000570616 PPP6R2O75170 966 aa25.27■■□□□ 1.64
SLC12A4-205ENST00000570616 PLA2G4BP0C869 781 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms