RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 DDX39AO00148 427 aaKnown RBP7.39□□□□□ -1.23
SMG6-204ENST00000570606 ENPP3O14638 875 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 BACH1O14867 736 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 MAFGO15525 162 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 ZBTB43O43298 467 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 DCXO43602 365 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 STAU1O95793 577 aaKnown RBP7.39□□□□□ -1.23
SMG6-204ENST00000570606 FOSP01100 380 aaPredicted RBP7.39□□□□□ -1.23
SMG6-204ENST00000570606 MMP1P03956 469 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 STAG3L1P0CL83 205 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 SCG2P13521 617 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 WEE1P30291 646 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 ZNF76P36508 570 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 NDUFV1P49821 464 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 ACTR2P61160 394 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 ZP2Q05996 745 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 HYAL1Q12794 435 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 COL9A3Q14050 684 aaPredicted RBP7.39□□□□□ -1.23
SMG6-204ENST00000570606 PLCB4Q15147 1175 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 RTN1Q16799 776 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 MARCH8Q5T0T0 291 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 FAM160B1Q5W0V3 765 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 APOA5Q6Q788 366 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 SGMS1Q86VZ5 419 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 ADHFE1Q8IWW8 467 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 CMTR2Q8IYT2 770 aaKnown RBP7.39□□□□□ -1.23
SMG6-204ENST00000570606 ZNF713Q8N859 430 aaPredicted RBP7.39□□□□□ -1.23
SMG6-204ENST00000570606 PRIMPOLQ96LW4 560 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 MXRA8Q9BRK3 442 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 PLVAPQ9BX97 442 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 ANO3Q9BYT9 981 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 IGFLR1Q9H665 355 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 AGO3Q9H9G7 860 aaKnown RBP7.39□□□□□ -1.23
SMG6-204ENST00000570606 RIC8AQ9NPQ8 531 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 KCNH7Q9NS40 1196 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 PRKAG3Q9UGI9 489 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 GINS2Q9Y248 185 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 MRPL42Q9Y6G3 142 aaKnown RBP7.39□□□□□ -1.23
SMG6-204ENST00000570606 TECTAO75443 2155 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 IGSF9BQ9UPX0 1349 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 DENND3A2RUS2 1198 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 TBX10O75333 385 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 DGKIO75912 1065 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 LINC00271P0C7V0 271 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 ARP10275 920 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 GTF2F1P35269 517 aaKnown RBP eCLIP7.38□□□□□ -1.23
SMG6-204ENST00000570606 STAT5BP51692 787 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 FGD1P98174 961 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 KRT76Q01546 638 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 ITGB3BPQ13352 177 aaPredicted RBP7.38□□□□□ -1.23
SMG6-204ENST00000570606 AP3B2Q13367 1082 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 SMAD4Q13485 552 aaKnown RBP7.38□□□□□ -1.23
SMG6-204ENST00000570606 COL19A1Q14993 1142 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 TMEM266Q2M3C6 531 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 CEP55Q53EZ4 464 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 SPOUT1Q5T280 376 aaKnown RBP7.38□□□□□ -1.23
SMG6-204ENST00000570606 MTHFD1LQ6UB35 978 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 CYP2W1Q8TAV3 490 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 P2RX5Q93086 422 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 ZNF689Q96CS4 500 aaPredicted RBP7.38□□□□□ -1.23
SMG6-204ENST00000570606 TCEANC2Q96MN5 208 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 PCYT2Q99447 389 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 CELF4Q9BZC1 486 aaKnown RBP7.38□□□□□ -1.23
SMG6-204ENST00000570606 UPF3BQ9BZI7 483 aaKnown RBP7.38□□□□□ -1.23
SMG6-204ENST00000570606 GLT8D2Q9H1C3 349 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 ETNK1Q9HBU6 452 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 AGO4Q9HCK5 861 aaKnown RBP7.38□□□□□ -1.23
SMG6-204ENST00000570606 ALG13Q9NP73 1137 aaKnown RBP7.38□□□□□ -1.23
SMG6-204ENST00000570606 CD207Q9UJ71 328 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 PADI3Q9ULW8 664 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 PCDHA2Q9Y5H9 948 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 TRIOO75962 3097 aa7.38□□□□□ -1.23
SMG6-204ENST00000570606 COL1A2P08123 1366 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 KDM3AQ9Y4C1 1321 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 KLF18A0A0U1RQI7 1052 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 SMIM35A0A1B0GVV1 85 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 SMCO2A6NFE2 343 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 STXBP3O00186 592 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 LINC01565O15544 149 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 MBTPS2O43462 519 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 HBP1O60381 514 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 RPS6KA5O75582 802 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 ITGB1P05556 798 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 ADD1P35611 737 aaKnown RBP7.37□□□□□ -1.23
SMG6-204ENST00000570606 LTBRP36941 435 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 SREBF1P36956 1147 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 SERPINB4P48594 390 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 SARSP49591 514 aaKnown RBP7.37□□□□□ -1.23
SMG6-204ENST00000570606 GATMP50440 423 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 SLC26A2P50443 739 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 EPHA4P54764 986 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 GDF10P55107 478 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 DLX2Q07687 328 aaPredicted RBP7.37□□□□□ -1.23
SMG6-204ENST00000570606 NFX1Q12986 1120 aaKnown RBP7.37□□□□□ -1.23
SMG6-204ENST00000570606 NECTIN1Q15223 517 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 SMAD2Q15796 467 aaKnown RBP7.37□□□□□ -1.23
SMG6-204ENST00000570606 CTC1Q2NKJ3 1217 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 NAALADL2Q58DX5 795 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 ODR4Q5SWX8 454 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 JAKMIP3Q5VZ66 844 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms