RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 CT47A1Q5JQC4 288 aaPredicted RBP17■□□□□ 0.31
HERPUD1-219ENST00000570273 NELFCDQ8IXH7 590 aa17■□□□□ 0.31
HERPUD1-219ENST00000570273 AOPEPQ8N6M6 819 aa17■□□□□ 0.31
HERPUD1-219ENST00000570273 PRPF31Q8WWY3 499 aaKnown RBP17■□□□□ 0.31
HERPUD1-219ENST00000570273 BPIFA3Q9BQP9 254 aa17■□□□□ 0.31
HERPUD1-219ENST00000570273 KIFC3Q9BVG8 833 aa17■□□□□ 0.31
HERPUD1-219ENST00000570273 RBSNQ9H1K0 784 aa17■□□□□ 0.31
HERPUD1-219ENST00000570273 GTF2IRD1Q9UHL9 959 aa17■□□□□ 0.31
HERPUD1-219ENST00000570273 OGDHLQ9ULD0 1010 aa17■□□□□ 0.31
HERPUD1-219ENST00000570273 PHF24Q9UPV7 400 aa17■□□□□ 0.31
HERPUD1-219ENST00000570273 A0A1W2PQ45 241 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 A0A1W2PQY0 241 aa16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 H0YCG3 227 aa16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 PRPF6O94906 941 aaKnown RBP16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 ERCC5P28715 1186 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 HOXC8P31273 242 aa16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 NAMPTP43490 491 aa16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 STX17P56962 302 aa16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 ZNF200P98182 395 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 LAMTOR4Q0VGL1 99 aa16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 CAPSQ13938 189 aa16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 HIC1Q14526 733 aa16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 MXD4Q14582 209 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 ZC2HC1CQ53FD0 456 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 EPM2AIP1Q7L775 607 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 ZNF720Q7Z2F6 126 aa16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 RHPN2Q8IUC4 686 aa16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 DEPTORQ8TB45 409 aa16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 SCFD1Q8WVM8 642 aa16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 DHTKD1Q96HY7 919 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 FAM49AQ9H0Q0 323 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 KCNG1Q9UIX4 513 aa16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 PCDHB13Q9Y5F0 798 aa16.99■□□□□ 0.31
HERPUD1-219ENST00000570273 GOLGA6L3A6NEY3 463 aa16.98■□□□□ 0.31
HERPUD1-219ENST00000570273 BECN2A8MW95 431 aa16.98■□□□□ 0.31
HERPUD1-219ENST00000570273 TREHO43280 583 aa16.98■□□□□ 0.31
HERPUD1-219ENST00000570273 GJB1P08034 283 aa16.98■□□□□ 0.31
HERPUD1-219ENST00000570273 ADAM17P78536 824 aa16.98■□□□□ 0.31
HERPUD1-219ENST00000570273 MYL5Q02045 173 aa16.98■□□□□ 0.31
HERPUD1-219ENST00000570273 ITGA7Q13683 1181 aa16.98■□□□□ 0.31
HERPUD1-219ENST00000570273 TFDP1Q14186 410 aa16.98■□□□□ 0.31
HERPUD1-219ENST00000570273 BMT2Q1RMZ1 405 aa16.98■□□□□ 0.31
HERPUD1-219ENST00000570273 RUFY4Q6ZNE9 571 aa16.98■□□□□ 0.31
HERPUD1-219ENST00000570273 HAUS6Q7Z4H7 955 aa16.98■□□□□ 0.31
HERPUD1-219ENST00000570273 SESTD1Q86VW0 696 aa16.98■□□□□ 0.31
HERPUD1-219ENST00000570273 U2AF1L4Q8WU68 220 aaKnown RBP16.98■□□□□ 0.31
HERPUD1-219ENST00000570273 P2RX5Q93086 422 aa16.98■□□□□ 0.31
HERPUD1-219ENST00000570273 NLRP4Q96MN2 994 aa16.98■□□□□ 0.31
HERPUD1-219ENST00000570273 ST6GALNAC4Q9H4F1 302 aa16.98■□□□□ 0.31
HERPUD1-219ENST00000570273 STARD7Q9NQZ5 370 aa16.98■□□□□ 0.31
HERPUD1-219ENST00000570273 RWDD2AQ9UIY3 292 aa16.98■□□□□ 0.31
HERPUD1-219ENST00000570273 ADGRA3Q8IWK6 1321 aa16.98■□□□□ 0.31
HERPUD1-219ENST00000570273 A0A0U1RQG5 324 aaPredicted RBP16.97■□□□□ 0.31
HERPUD1-219ENST00000570273 SMIM35A0A1B0GVV1 85 aa16.97■□□□□ 0.31
HERPUD1-219ENST00000570273 DENND3A2RUS2 1198 aa16.97■□□□□ 0.31
HERPUD1-219ENST00000570273 PPP1R37O75864 691 aa16.97■□□□□ 0.31
HERPUD1-219ENST00000570273 VTNP04004 478 aa16.97■□□□□ 0.31
HERPUD1-219ENST00000570273 CCNE1P24864 410 aa16.97■□□□□ 0.31
HERPUD1-219ENST00000570273 GSE1Q14687 1217 aa16.97■□□□□ 0.31
HERPUD1-219ENST00000570273 GDF6Q6KF10 455 aaPredicted RBP16.97■□□□□ 0.31
HERPUD1-219ENST00000570273 LUZP1Q86V48 1076 aa16.97■□□□□ 0.31
HERPUD1-219ENST00000570273 KSR1Q8IVT5 923 aa16.97■□□□□ 0.31
HERPUD1-219ENST00000570273 KIAA0319LQ8IZA0 1049 aa16.97■□□□□ 0.31
HERPUD1-219ENST00000570273 RNF149Q8NC42 400 aa16.97■□□□□ 0.31
HERPUD1-219ENST00000570273 TMEM161BQ8NDZ6 487 aa16.97■□□□□ 0.31
HERPUD1-219ENST00000570273 HVCN1Q96D96 273 aa16.97■□□□□ 0.31
HERPUD1-219ENST00000570273 SCLT1Q96NL6 688 aa16.97■□□□□ 0.31
HERPUD1-219ENST00000570273 ACCSQ96QU6 501 aa16.97■□□□□ 0.31
HERPUD1-219ENST00000570273 PPP1R16BQ96T49 567 aa16.97■□□□□ 0.31
HERPUD1-219ENST00000570273 TSG101Q99816 390 aa16.97■□□□□ 0.31
HERPUD1-219ENST00000570273 GRIN2DO15399 1336 aa16.97■□□□□ 0.31
HERPUD1-219ENST00000570273 MYH11P35749 1972 aa16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 BICDL2A1A5D9 508 aa16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 TRIM49BA6NDI0 452 aa16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 SMTNL1A8MU46 457 aa16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 GOLGA6L19H0YKK7 550 aa16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 ASAP2O43150 1006 aa16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 SGPL1O95470 568 aa16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 TFRCP02786 760 aaKnown RBP16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 SRGAP2CP0DJJ0 459 aa16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 GTF2BQ00403 316 aa16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 PTPN11Q06124 597 aaPredicted RBP16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 IQCB1Q15051 598 aa16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 KNOP1Q1ED39 458 aaKnown RBP16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 ZBTB8OSQ8IWT0 167 aa16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 DHX40Q8IX18 779 aaKnown RBP16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 ZNF507Q8TCN5 953 aa16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 ZNF668Q96K58 619 aaPredicted RBP16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 NTPCRQ9BSD7 190 aaKnown RBP16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 STRA6Q9BX79 667 aa16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 CRISPLD2Q9H0B8 497 aa16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 ARHGAP28Q9P2N2 729 aa16.96■□□□□ 0.31
HERPUD1-219ENST00000570273 IKBKBO14920 756 aa16.96■□□□□ 0.3
HERPUD1-219ENST00000570273 SCP2P22307 547 aa16.96■□□□□ 0.3
HERPUD1-219ENST00000570273 ABCD1P33897 745 aa16.96■□□□□ 0.3
HERPUD1-219ENST00000570273 PHKA2P46019 1235 aa16.96■□□□□ 0.3
HERPUD1-219ENST00000570273 PMS1P54277 932 aaKnown RBP16.96■□□□□ 0.3
HERPUD1-219ENST00000570273 TPD52L1Q16890 204 aaPredicted RBP16.96■□□□□ 0.3
HERPUD1-219ENST00000570273 TAF2Q6P1X5 1199 aa16.96■□□□□ 0.3
HERPUD1-219ENST00000570273 SYCP3Q8IZU3 236 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms