RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	CCDC39	Q9UFE4	941 aa		19.96	■□□□□ 0.79
PKD1-238	ENST00000570150	SCN5A	Q14524	2016 aa		19.96	■□□□□ 0.79
PKD1-238	ENST00000570150	COL4A6	Q14031	1691 aa		19.95	■□□□□ 0.78
PKD1-238	ENST00000570150	USO1	O60763	962 aa	Known RBP	19.95	■□□□□ 0.78
PKD1-238	ENST00000570150	SRGAP2C	P0DJJ0	459 aa		19.95	■□□□□ 0.78
PKD1-238	ENST00000570150	ZSCAN22	P10073	491 aa	Predicted RBP	19.95	■□□□□ 0.78
PKD1-238	ENST00000570150	ABCD1	P33897	745 aa		19.95	■□□□□ 0.78
PKD1-238	ENST00000570150	ARL2	P36404	184 aa		19.95	■□□□□ 0.78
PKD1-238	ENST00000570150	EFNA5	P52803	228 aa		19.95	■□□□□ 0.78
PKD1-238	ENST00000570150	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	19.95	■□□□□ 0.78
PKD1-238	ENST00000570150	CMTR2	Q8IYT2	770 aa	Known RBP	19.95	■□□□□ 0.78
PKD1-238	ENST00000570150	HACE1	Q8IYU2	909 aa		19.95	■□□□□ 0.78
PKD1-238	ENST00000570150	CNNM3	Q8NE01	707 aa		19.95	■□□□□ 0.78
PKD1-238	ENST00000570150	PRIMPOL	Q96LW4	560 aa		19.95	■□□□□ 0.78
PKD1-238	ENST00000570150	BHMT2	Q9H2M3	363 aa		19.95	■□□□□ 0.78
PKD1-238	ENST00000570150	CDHR5	Q9HBB8	845 aa		19.95	■□□□□ 0.78
PKD1-238	ENST00000570150	YBX2	Q9Y2T7	364 aa	Known RBP	19.95	■□□□□ 0.78
PKD1-238	ENST00000570150	GTPBP6	O43824	516 aa	Predicted RBP	19.94	■□□□□ 0.78
PKD1-238	ENST00000570150	UPP2	O95045	317 aa		19.94	■□□□□ 0.78
PKD1-238	ENST00000570150	PTEN	P60484	403 aa		19.94	■□□□□ 0.78
PKD1-238	ENST00000570150	FAM189B	P81408	668 aa		19.94	■□□□□ 0.78
PKD1-238	ENST00000570150	SLC39A14	Q15043	492 aa		19.94	■□□□□ 0.78
PKD1-238	ENST00000570150	CSPP1	Q1MSJ5	1256 aa		19.94	■□□□□ 0.78
PKD1-238	ENST00000570150	NAALADL2	Q58DX5	795 aa		19.94	■□□□□ 0.78
PKD1-238	ENST00000570150	CABP7	Q86V35	215 aa		19.94	■□□□□ 0.78
PKD1-238	ENST00000570150	ABI1	Q8IZP0	508 aa		19.94	■□□□□ 0.78
PKD1-238	ENST00000570150	FIBCD1	Q8N539	461 aa		19.94	■□□□□ 0.78
PKD1-238	ENST00000570150	PGBD4	Q96DM1	585 aa		19.94	■□□□□ 0.78
PKD1-238	ENST00000570150	PPP1R16B	Q96T49	567 aa		19.94	■□□□□ 0.78
PKD1-238	ENST00000570150	IFT122	Q9HBG6	1241 aa		19.94	■□□□□ 0.78
PKD1-238	ENST00000570150	AAAS	Q9NRG9	546 aa		19.94	■□□□□ 0.78
PKD1-238	ENST00000570150	LMCD1	Q9NZU5	365 aa		19.94	■□□□□ 0.78
PKD1-238	ENST00000570150	SRPRB	Q9Y5M8	271 aa	Known RBP	19.94	■□□□□ 0.78
PKD1-238	ENST00000570150		A0A0U1RQF3	1178 aa		19.93	■□□□□ 0.78
PKD1-238	ENST00000570150		C9IYK1	514 aa		19.93	■□□□□ 0.78
PKD1-238	ENST00000570150		H0YCG3	227 aa		19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	ZBTB39	O15060	712 aa		19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	DGKI	O75912	1065 aa		19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	YEATS4	O95619	227 aa		19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	RB1	P06400	928 aa		19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	NAMPT	P43490	491 aa		19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	ERVK-21	P61565	698 aa		19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	TAP1	Q03518	808 aa		19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	DRP2	Q13474	957 aa		19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	TCTN1	Q2MV58	587 aa		19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	FAM102B	Q5T8I3	360 aa		19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	KRI1	Q8N9T8	703 aa	Known RBP	19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	ZNF579	Q8NAF0	562 aa	Known RBP	19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	PLVAP	Q9BX97	442 aa		19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	CCSER1	Q9C0I3	900 aa		19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	POLR3F	Q9H1D9	316 aa	Predicted RBP	19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	TMX1	Q9H3N1	280 aa		19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	UBN1	Q9NPG3	1134 aa		19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	XPNPEP1	Q9NQW7	623 aa		19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	ADGRA3	Q8IWK6	1321 aa		19.93	■□□□□ 0.78
PKD1-238	ENST00000570150	CDH23	Q9H251	3354 aa		19.92	■□□□□ 0.78
PKD1-238	ENST00000570150	PPP6R2	O75170	966 aa		19.92	■□□□□ 0.78
PKD1-238	ENST00000570150	FOSL2	P15408	326 aa		19.92	■□□□□ 0.78
PKD1-238	ENST00000570150	NASP	P49321	788 aa	Predicted RBP	19.92	■□□□□ 0.78
PKD1-238	ENST00000570150	BTG3	Q14201	252 aa	Predicted RBP	19.92	■□□□□ 0.78
PKD1-238	ENST00000570150	DSC3	Q14574	896 aa		19.92	■□□□□ 0.78
PKD1-238	ENST00000570150	STK38	Q15208	465 aa		19.92	■□□□□ 0.78
PKD1-238	ENST00000570150	IL17A	Q16552	155 aa		19.92	■□□□□ 0.78
PKD1-238	ENST00000570150	TWF2	Q6IBS0	349 aa	Known RBP	19.92	■□□□□ 0.78
PKD1-238	ENST00000570150	NOTUM	Q6P988	496 aa		19.92	■□□□□ 0.78
PKD1-238	ENST00000570150	KCNG4	Q8TDN1	519 aa		19.92	■□□□□ 0.78
PKD1-238	ENST00000570150	MRPL9	Q9BYD2	267 aa	Known RBP	19.92	■□□□□ 0.78
PKD1-238	ENST00000570150	AGPAT5	Q9NUQ2	364 aa		19.92	■□□□□ 0.78
PKD1-238	ENST00000570150	PRMT7	Q9NVM4	692 aa	Predicted RBP	19.92	■□□□□ 0.78
PKD1-238	ENST00000570150	PIN4	Q9Y237	131 aa	Known RBP	19.92	■□□□□ 0.78
PKD1-238	ENST00000570150	RBM19	Q9Y4C8	960 aa	Known RBP	19.92	■□□□□ 0.78
PKD1-238	ENST00000570150	F13A1	P00488	732 aa		19.91	■□□□□ 0.78
PKD1-238	ENST00000570150	GUCY2C	P25092	1073 aa		19.91	■□□□□ 0.78
PKD1-238	ENST00000570150	SMTN	P53814	917 aa		19.91	■□□□□ 0.78
PKD1-238	ENST00000570150	PTPRO	Q16827	1216 aa		19.91	■□□□□ 0.78
PKD1-238	ENST00000570150	FAM117B	Q6P1L5	589 aa		19.91	■□□□□ 0.78
PKD1-238	ENST00000570150	SYT2	Q8N9I0	419 aa	Predicted RBP	19.91	■□□□□ 0.78
PKD1-238	ENST00000570150	DEPTOR	Q8TB45	409 aa		19.91	■□□□□ 0.78
PKD1-238	ENST00000570150	MYLIP	Q8WY64	445 aa		19.91	■□□□□ 0.78
PKD1-238	ENST00000570150	ZNF689	Q96CS4	500 aa	Predicted RBP	19.91	■□□□□ 0.78
PKD1-238	ENST00000570150	PYM1	Q9BRP8	204 aa	Known RBP	19.91	■□□□□ 0.78
PKD1-238	ENST00000570150	C11orf84	Q9BUA3	381 aa	Predicted RBP	19.91	■□□□□ 0.78
PKD1-238	ENST00000570150	STK17A	Q9UEE5	414 aa		19.91	■□□□□ 0.78
PKD1-238	ENST00000570150	TET1	Q8NFU7	2136 aa		19.91	■□□□□ 0.78
PKD1-238	ENST00000570150	WDR81	Q562E7	1941 aa		19.9	■□□□□ 0.78
PKD1-238	ENST00000570150	LINC01553	A4QN01	128 aa		19.9	■□□□□ 0.78
PKD1-238	ENST00000570150	LRRIQ4	A6NIV6	560 aa		19.9	■□□□□ 0.78
PKD1-238	ENST00000570150	INO80B-WBP1	J3KQ70	363 aa		19.9	■□□□□ 0.78
PKD1-238	ENST00000570150	ZNF623	O75123	536 aa		19.9	■□□□□ 0.78
PKD1-238	ENST00000570150	POU3F3	P20264	500 aa	Predicted RBP	19.9	■□□□□ 0.78
PKD1-238	ENST00000570150	DMP1	Q13316	513 aa	Predicted RBP	19.9	■□□□□ 0.78
PKD1-238	ENST00000570150	GRIN2C	Q14957	1233 aa		19.9	■□□□□ 0.78
PKD1-238	ENST00000570150	PTPA	Q15257	358 aa		19.9	■□□□□ 0.78
PKD1-238	ENST00000570150	ZRSR1	Q15695	479 aa	Known RBP	19.9	■□□□□ 0.78
PKD1-238	ENST00000570150	MAPK6	Q16659	721 aa		19.9	■□□□□ 0.78
PKD1-238	ENST00000570150	CCDC73	Q6ZRK6	1079 aa		19.9	■□□□□ 0.78
PKD1-238	ENST00000570150	RTN4RL1	Q86UN2	441 aa	Predicted RBP	19.9	■□□□□ 0.78
PKD1-238	ENST00000570150	CRIPAK	Q8N1N5	446 aa		19.9	■□□□□ 0.78
PKD1-238	ENST00000570150	OSBPL7	Q9BZF2	842 aa		19.9	■□□□□ 0.78
PKD1-238	ENST00000570150	LRRC27	Q9C0I9	530 aa		19.9	■□□□□ 0.78

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms