RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 CCDC194A0A1B0GVG4 234 aa13.9□□□□□ -0.18
SCAMP2-212ENST00000569904 TMEM150BA6NC51 233 aa13.9□□□□□ -0.18
SCAMP2-212ENST00000569904 DKC1O60832 514 aaKnown RBP eCLIP13.9□□□□□ -0.18
SCAMP2-212ENST00000569904 P4HBP07237 508 aaKnown RBP13.9□□□□□ -0.18
SCAMP2-212ENST00000569904 DNM2P50570 870 aa13.9□□□□□ -0.18
SCAMP2-212ENST00000569904 SPIRE1Q08AE8 756 aa13.9□□□□□ -0.18
SCAMP2-212ENST00000569904 KCNT2Q6UVM3 1135 aa13.9□□□□□ -0.18
SCAMP2-212ENST00000569904 C4orf19Q8IY42 314 aa13.9□□□□□ -0.18
SCAMP2-212ENST00000569904 THNSL1Q8IYQ7 743 aa13.9□□□□□ -0.18
SCAMP2-212ENST00000569904 TNFRSF25Q93038 417 aa13.9□□□□□ -0.18
SCAMP2-212ENST00000569904 FDXACB1Q9BRP7 624 aaPredicted RBP13.9□□□□□ -0.18
SCAMP2-212ENST00000569904 INO80BQ9C086 356 aaPredicted RBP13.9□□□□□ -0.18
SCAMP2-212ENST00000569904 DHX33Q9H6R0 707 aaKnown RBP13.9□□□□□ -0.18
SCAMP2-212ENST00000569904 HCN4Q9Y3Q4 1203 aa13.9□□□□□ -0.18
SCAMP2-212ENST00000569904 PCDHGC5Q9Y5F6 944 aa13.9□□□□□ -0.18
SCAMP2-212ENST00000569904 WDFY4Q6ZS81 3184 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 CARNS1A5YM72 827 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 FAM86C2PA6NEL3 165 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 LOC730098B7Z3J9 87 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 ZNF623O75123 536 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 CSPG5O95196 566 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 FDPSP14324 419 aaKnown RBP13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 FGFR4P22455 802 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 SFPQP23246 707 aaKnown RBP eCLIP13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 PHKA2P46019 1235 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 AK2P54819 239 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 CBX2Q14781 532 aaPredicted RBP13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 CLUL1Q15846 466 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 HERC4Q5GLZ8 1057 aaPredicted RBP13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 EARS2Q5JPH6 523 aaKnown RBP13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 EXOC8Q8IYI6 725 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 ABI1Q8IZP0 508 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 VN1R2Q8NFZ6 395 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 OXER1Q8TDS5 423 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 SUSD6Q92537 303 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 WASF1Q92558 559 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 ZNF668Q96K58 619 aaPredicted RBP13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 ZNF558Q96NG5 402 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 MRPL9Q9BYD2 267 aaKnown RBP13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 TLE6Q9H808 572 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 IFT122Q9HBG6 1241 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 NGRNQ9NPE2 291 aaKnown RBP13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 CYP26B1Q9NR63 512 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 GJB4Q9NTQ9 266 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 PPP4R2Q9NY27 417 aa13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 SUCLA2Q9P2R7 463 aaPredicted RBP13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 WRAP73Q9P2S5 460 aaPredicted RBP13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 PUF60Q9UHX1 559 aaKnown RBP13.89□□□□□ -0.19
SCAMP2-212ENST00000569904 DDX11L8A8MPP1 907 aa13.88□□□□□ -0.19
SCAMP2-212ENST00000569904 GAS2O43903 313 aaKnown RBP13.88□□□□□ -0.19
SCAMP2-212ENST00000569904 CCNT1O60563 726 aaKnown RBP13.88□□□□□ -0.19
SCAMP2-212ENST00000569904 NEFLP07196 543 aa13.88□□□□□ -0.19
SCAMP2-212ENST00000569904 SKIP12755 728 aa13.88□□□□□ -0.19
SCAMP2-212ENST00000569904 IBSPP21815 317 aaPredicted RBP13.88□□□□□ -0.19
SCAMP2-212ENST00000569904 EPHA7Q15375 998 aa13.88□□□□□ -0.19
SCAMP2-212ENST00000569904 PIK3AP1Q6ZUJ8 805 aa13.88□□□□□ -0.19
SCAMP2-212ENST00000569904 RBM23Q86U06 439 aaKnown RBP13.88□□□□□ -0.19
SCAMP2-212ENST00000569904 RHPN2Q8IUC4 686 aa13.88□□□□□ -0.19
SCAMP2-212ENST00000569904 SLC39A11Q8N1S5 342 aa13.88□□□□□ -0.19
SCAMP2-212ENST00000569904 GTF3C6Q969F1 213 aa13.88□□□□□ -0.19
SCAMP2-212ENST00000569904 SCLT1Q96NL6 688 aa13.88□□□□□ -0.19
SCAMP2-212ENST00000569904 SH2D3AQ9BRG2 576 aa13.88□□□□□ -0.19
SCAMP2-212ENST00000569904 SPG21Q9NZD8 308 aa13.88□□□□□ -0.19
SCAMP2-212ENST00000569904 ORC3Q9UBD5 711 aaPredicted RBP13.88□□□□□ -0.19
SCAMP2-212ENST00000569904 BARX2Q9UMQ3 279 aaPredicted RBP13.88□□□□□ -0.19
SCAMP2-212ENST00000569904 PER2O15055 1255 aa13.87□□□□□ -0.19
SCAMP2-212ENST00000569904 CSDE1O75534 798 aaKnown RBP13.87□□□□□ -0.19
SCAMP2-212ENST00000569904 RFC5P40937 340 aa13.87□□□□□ -0.19
SCAMP2-212ENST00000569904 RAB27AP51159 221 aa13.87□□□□□ -0.19
SCAMP2-212ENST00000569904 NPEPPSP55786 919 aa13.87□□□□□ -0.19
SCAMP2-212ENST00000569904 KRT17Q04695 432 aa13.87□□□□□ -0.19
SCAMP2-212ENST00000569904 ME3Q16798 604 aa13.87□□□□□ -0.19
SCAMP2-212ENST00000569904 PLA2G4FQ68DD2 849 aa13.87□□□□□ -0.19
SCAMP2-212ENST00000569904 POTEDQ86YR6 584 aa13.87□□□□□ -0.19
SCAMP2-212ENST00000569904 SLFN12Q8IYM2 578 aa13.87□□□□□ -0.19
SCAMP2-212ENST00000569904 HELQQ8TDG4 1101 aa13.87□□□□□ -0.19
SCAMP2-212ENST00000569904 MICAL1Q8TDZ2 1067 aa13.87□□□□□ -0.19
SCAMP2-212ENST00000569904 SLC7A3Q8WY07 619 aa13.87□□□□□ -0.19
SCAMP2-212ENST00000569904 FAM122AQ96E09 287 aa13.87□□□□□ -0.19
SCAMP2-212ENST00000569904 TCF25Q9BQ70 676 aa13.87□□□□□ -0.19
SCAMP2-212ENST00000569904 S1PR5Q9H228 398 aa13.87□□□□□ -0.19
SCAMP2-212ENST00000569904 AGPAT5Q9NUQ2 364 aa13.87□□□□□ -0.19
SCAMP2-212ENST00000569904 FAM105AQ9NUU6 356 aa13.87□□□□□ -0.19
SCAMP2-212ENST00000569904 USP15Q9Y4E8 981 aaPredicted RBP13.87□□□□□ -0.19
SCAMP2-212ENST00000569904 HIDE1A8MVS5 230 aa13.86□□□□□ -0.19
SCAMP2-212ENST00000569904 EIF5BO60841 1220 aaKnown RBP13.86□□□□□ -0.19
SCAMP2-212ENST00000569904 LARGE1O95461 756 aa13.86□□□□□ -0.19
SCAMP2-212ENST00000569904 KRT2P35908 639 aa13.86□□□□□ -0.19
SCAMP2-212ENST00000569904 PBX3P40426 434 aa13.86□□□□□ -0.19
SCAMP2-212ENST00000569904 BCAR1P56945 870 aa13.86□□□□□ -0.19
SCAMP2-212ENST00000569904 NR5A1Q13285 461 aa13.86□□□□□ -0.19
SCAMP2-212ENST00000569904 PLPP4Q5VZY2 271 aa13.86□□□□□ -0.19
SCAMP2-212ENST00000569904 SRGAP1Q7Z6B7 1085 aa13.86□□□□□ -0.19
SCAMP2-212ENST00000569904 RNF135Q8IUD6 432 aa13.86□□□□□ -0.19
SCAMP2-212ENST00000569904 KSR1Q8IVT5 923 aa13.86□□□□□ -0.19
SCAMP2-212ENST00000569904 ZNF579Q8NAF0 562 aaKnown RBP13.86□□□□□ -0.19
SCAMP2-212ENST00000569904 NSUN7Q8NE18 718 aaKnown RBP13.86□□□□□ -0.19
SCAMP2-212ENST00000569904 PSPC1Q8WXF1 523 aaKnown RBP13.86□□□□□ -0.19
SCAMP2-212ENST00000569904 CEP170P1Q96L14 293 aa13.86□□□□□ -0.19
SCAMP2-212ENST00000569904 NLRP4Q96MN2 994 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms