RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 SFPQP23246 707 aaKnown RBP eCLIP15.37■□□□□ 0.05
HERPUD1-218ENST00000569569 FAM189BP81408 668 aa15.37■□□□□ 0.05
HERPUD1-218ENST00000569569 ECM1Q16610 540 aa15.37■□□□□ 0.05
HERPUD1-218ENST00000569569 SRGAP1Q7Z6B7 1085 aa15.37■□□□□ 0.05
HERPUD1-218ENST00000569569 FIBCD1Q8N539 461 aa15.37■□□□□ 0.05
HERPUD1-218ENST00000569569 SAMD11Q96NU1 681 aa15.37■□□□□ 0.05
HERPUD1-218ENST00000569569 RC3H2Q9HBD1 1191 aaKnown RBP15.37■□□□□ 0.05
HERPUD1-218ENST00000569569 CHST12Q9NRB3 414 aa15.37■□□□□ 0.05
HERPUD1-218ENST00000569569 KIAA1024Q9UPX6 916 aa15.37■□□□□ 0.05
HERPUD1-218ENST00000569569 KIAA1671Q9BY89 1806 aa15.37■□□□□ 0.05
HERPUD1-218ENST00000569569 TRANK1O15050 2925 aa15.37■□□□□ 0.05
HERPUD1-218ENST00000569569 RFXAPO00287 272 aa15.36■□□□□ 0.05
HERPUD1-218ENST00000569569 STX6O43752 255 aa15.36■□□□□ 0.05
HERPUD1-218ENST00000569569 USO1O60763 962 aaKnown RBP15.36■□□□□ 0.05
HERPUD1-218ENST00000569569 HSP90AA1P07900 732 aaKnown RBP15.36■□□□□ 0.05
HERPUD1-218ENST00000569569 IGFBP4P22692 258 aa15.36■□□□□ 0.05
HERPUD1-218ENST00000569569 ARL2P36404 184 aa15.36■□□□□ 0.05
HERPUD1-218ENST00000569569 POU5F1BQ06416 359 aa15.36■□□□□ 0.05
HERPUD1-218ENST00000569569 ADGRE1Q14246 886 aa15.36■□□□□ 0.05
HERPUD1-218ENST00000569569 SPRED2Q7Z698 418 aa15.36■□□□□ 0.05
HERPUD1-218ENST00000569569 RNF149Q8NC42 400 aa15.36■□□□□ 0.05
HERPUD1-218ENST00000569569 MCPH1Q8NEM0 835 aa15.36■□□□□ 0.05
HERPUD1-218ENST00000569569 MAFAQ8NHW3 353 aaPredicted RBP15.36■□□□□ 0.05
HERPUD1-218ENST00000569569 ELAC1Q9H777 363 aaKnown RBP15.36■□□□□ 0.05
HERPUD1-218ENST00000569569 DACT1Q9NYF0 836 aa15.36■□□□□ 0.05
HERPUD1-218ENST00000569569 MTMR6Q9Y217 621 aa15.36■□□□□ 0.05
HERPUD1-218ENST00000569569 ADGRA3Q8IWK6 1321 aa15.36■□□□□ 0.05
HERPUD1-218ENST00000569569 COL4A4P53420 1690 aaPredicted RBP15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 ARHGEF35A5YM69 484 aa15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 VWA3AA6NCI4 1184 aa15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 EPOPA6NHQ4 379 aa15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 PP2D1A8MPX8 630 aa15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 PDIA4P13667 645 aaKnown RBP15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 POU3F3P20264 500 aaPredicted RBP15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 IBSPP21815 317 aaPredicted RBP15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 CDC25AP30304 524 aa15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 RESTQ13127 1097 aa15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 TFDP1Q14186 410 aa15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 BTG3Q14201 252 aaPredicted RBP15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 SF3A1Q15459 793 aaKnown RBP15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 PADI6Q6TGC4 694 aa15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 CATSPER4Q7RTX7 472 aa15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 CMTR2Q8IYT2 770 aaKnown RBP15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 C17orf80Q9BSJ5 609 aa15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 MMTAG2Q9BU76 263 aaKnown RBP15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 ZSCAN16Q9H4T2 348 aaPredicted RBP15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 DDX19AQ9NUU7 478 aaKnown RBP15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 TMEM161AQ9NX61 479 aa15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 MTUS1Q9ULD2 1270 aa15.35■□□□□ 0.05
HERPUD1-218ENST00000569569 MYO7AQ13402 2215 aa15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 A0A0U1RQF3 1178 aa15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 GTPBP6O43824 516 aaPredicted RBP15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 CYP11B2P19099 503 aa15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 GLRA2P23416 452 aa15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 PHKA2P46019 1235 aa15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 PTENP60484 403 aa15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 PCBP1Q15365 356 aaKnown RBP eCLIP15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 EPC2Q52LR7 807 aa15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 MAEAQ7L5Y9 396 aa15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 IFNLR1Q8IU57 520 aaPredicted RBP15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 TMEM192Q8IY95 271 aa15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 KCTD17Q8N5Z5 321 aa15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 FBXO22Q8NEZ5 403 aa15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 ASAP3Q8TDY4 903 aa15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 CLP1Q92989 425 aaKnown RBP15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 AK8Q96MA6 479 aa15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 POLR3FQ9H1D9 316 aaPredicted RBP15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 BHMT2Q9H2M3 363 aa15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 MINDY3Q9H8M7 445 aa15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 DNM3Q9UQ16 869 aa15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 RWDD3Q9Y3V2 267 aa15.34■□□□□ 0.05
HERPUD1-218ENST00000569569 LPXNO60711 386 aa15.33■□□□□ 0.04
HERPUD1-218ENST00000569569 EYA4O95677 639 aa15.33■□□□□ 0.04
HERPUD1-218ENST00000569569 EOMESO95936 686 aa15.33■□□□□ 0.04
HERPUD1-218ENST00000569569 GRB10Q13322 594 aa15.33■□□□□ 0.04
HERPUD1-218ENST00000569569 CAPSQ13938 189 aa15.33■□□□□ 0.04
HERPUD1-218ENST00000569569 HYIQ5T013 277 aa15.33■□□□□ 0.04
HERPUD1-218ENST00000569569 FAM102BQ5T8I3 360 aa15.33■□□□□ 0.04
HERPUD1-218ENST00000569569 TWF2Q6IBS0 349 aaKnown RBP15.33■□□□□ 0.04
HERPUD1-218ENST00000569569 ECHDC2Q86YB7 292 aa15.33■□□□□ 0.04
HERPUD1-218ENST00000569569 TRAIPQ9BWF2 469 aa15.33■□□□□ 0.04
HERPUD1-218ENST00000569569 NFKBIZQ9BYH8 718 aa15.33■□□□□ 0.04
HERPUD1-218ENST00000569569 NT5C3AQ9H0P0 336 aa15.33■□□□□ 0.04
HERPUD1-218ENST00000569569 AGPAT5Q9NUQ2 364 aa15.33■□□□□ 0.04
HERPUD1-218ENST00000569569 LMCD1Q9NZU5 365 aa15.33■□□□□ 0.04
HERPUD1-218ENST00000569569 PIN4Q9Y237 131 aaKnown RBP15.33■□□□□ 0.04
HERPUD1-218ENST00000569569 EYSQ5T1H1 3165 aa15.32■□□□□ 0.04
HERPUD1-218ENST00000569569 E9PMD0 336 aa15.32■□□□□ 0.04
HERPUD1-218ENST00000569569 HOXA2O43364 376 aa15.32■□□□□ 0.04
HERPUD1-218ENST00000569569 SLC26A4O43511 780 aa15.32■□□□□ 0.04
HERPUD1-218ENST00000569569 RB1P06400 928 aa15.32■□□□□ 0.04
HERPUD1-218ENST00000569569 SKIP12755 728 aa15.32■□□□□ 0.04
HERPUD1-218ENST00000569569 LONP1P36776 959 aaKnown RBP15.32■□□□□ 0.04
HERPUD1-218ENST00000569569 BMPR1AP36894 532 aa15.32■□□□□ 0.04
HERPUD1-218ENST00000569569 ZRSR1Q15695 479 aaKnown RBP15.32■□□□□ 0.04
HERPUD1-218ENST00000569569 PAN2Q504Q3 1202 aaKnown RBP15.32■□□□□ 0.04
HERPUD1-218ENST00000569569 FAM173BQ6P4H8 233 aa15.32■□□□□ 0.04
HERPUD1-218ENST00000569569 GDPD5Q8WTR4 605 aa15.32■□□□□ 0.04
HERPUD1-218ENST00000569569 GPRC5CQ9NQ84 441 aa15.32■□□□□ 0.04
HERPUD1-218ENST00000569569 CLIC4Q9Y696 253 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms