RNA–Protein interactions for RNA: ENST00000569341.1

CFDP1-208, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-208ENST00000569341 KRIT1O00522 736 aa5.08□□□□□ -1.6
CFDP1-208ENST00000569341 FYB1O15117 783 aa5.08□□□□□ -1.6
CFDP1-208ENST00000569341 GJB6O95452 261 aa5.08□□□□□ -1.6
CFDP1-208ENST00000569341 XRCC6P12956 609 aaKnown RBP eCLIP5.08□□□□□ -1.6
CFDP1-208ENST00000569341 MCCP23508 829 aa5.08□□□□□ -1.6
CFDP1-208ENST00000569341 INHBEP58166 350 aa5.08□□□□□ -1.6
CFDP1-208ENST00000569341 PPP2R2AP63151 447 aa5.08□□□□□ -1.6
CFDP1-208ENST00000569341 PURAQ00577 322 aaKnown RBP5.08□□□□□ -1.6
CFDP1-208ENST00000569341 PFKPQ01813 784 aa5.08□□□□□ -1.6
CFDP1-208ENST00000569341 PTH1RQ03431 593 aa5.08□□□□□ -1.6
CFDP1-208ENST00000569341 DPTQ07507 201 aa5.08□□□□□ -1.6
CFDP1-208ENST00000569341 SLC10A6Q3KNW5 377 aa5.08□□□□□ -1.6
CFDP1-208ENST00000569341 PAN2Q504Q3 1202 aaKnown RBP5.08□□□□□ -1.6
CFDP1-208ENST00000569341 REXO1L1PQ8IX06 675 aa5.08□□□□□ -1.6
CFDP1-208ENST00000569341 KCTD13Q8WZ19 329 aa5.08□□□□□ -1.6
CFDP1-208ENST00000569341 CEP89Q96ST8 783 aa5.08□□□□□ -1.6
CFDP1-208ENST00000569341 NOB1Q9ULX3 412 aaKnown RBP5.08□□□□□ -1.6
CFDP1-208ENST00000569341 RRP7AQ9Y3A4 280 aaKnown RBP5.08□□□□□ -1.6
CFDP1-208ENST00000569341 SIGLEC1Q9BZZ2 1709 aa5.08□□□□□ -1.6
CFDP1-208ENST00000569341 NEXMIFQ5QGS0 1516 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 DLC1Q96QB1 1528 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 ATP7BP35670 1465 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 PTCH1Q13635 1447 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 KIF1BO60333 1816 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 WDR33Q9C0J8 1336 aaKnown RBP5.07□□□□□ -1.6
CFDP1-208ENST00000569341 U2SURPO15042 1029 aaKnown RBP5.07□□□□□ -1.6
CFDP1-208ENST00000569341 FBXO21O94952 628 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 ZNF853P0CG23 659 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 ACO1P21399 889 aaKnown RBP5.07□□□□□ -1.6
CFDP1-208ENST00000569341 TNNT2P45379 298 aaPredicted RBP5.07□□□□□ -1.6
CFDP1-208ENST00000569341 TERF1P54274 439 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 NUCB2P80303 420 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 DUSP8Q13202 625 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 TUSC3Q13454 348 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 GNL2Q13823 731 aaKnown RBP5.07□□□□□ -1.6
CFDP1-208ENST00000569341 RABEP1Q15276 862 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 NFE2L2Q16236 605 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 LSM12Q3MHD2 195 aaKnown RBP5.07□□□□□ -1.6
CFDP1-208ENST00000569341 CD276Q5ZPR3 534 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 CASC1Q6TDU7 716 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 USP53Q70EK8 1073 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 OTOP3Q7RTS5 596 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 RPAP2Q8IXW5 612 aaPredicted RBP5.07□□□□□ -1.6
CFDP1-208ENST00000569341 TMEM57Q8N5G2 664 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 ANP32BQ92688 251 aaKnown RBP5.07□□□□□ -1.6
CFDP1-208ENST00000569341 IER2Q9BTL4 223 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 TRIM8Q9BZR9 551 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 ZNF408Q9H9D4 720 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 ARHGAP20Q9P2F6 1191 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 NAP1L2Q9ULW6 460 aaPredicted RBP5.07□□□□□ -1.6
CFDP1-208ENST00000569341 R3HCC1Q9Y3T6 440 aaKnown RBP5.07□□□□□ -1.6
CFDP1-208ENST00000569341 A2ML1A8K2U0 1454 aa5.07□□□□□ -1.6
CFDP1-208ENST00000569341 CPSF1Q10570 1443 aaKnown RBP5.06□□□□□ -1.6
CFDP1-208ENST00000569341 FAM135BQ49AJ0 1406 aa5.06□□□□□ -1.6
CFDP1-208ENST00000569341 YTHDC2Q9H6S0 1430 aaKnown RBP5.06□□□□□ -1.6
CFDP1-208ENST00000569341 TMEM2Q9UHN6 1383 aa5.06□□□□□ -1.6
CFDP1-208ENST00000569341 ZC3H13Q5T200 1668 aaKnown RBP5.06□□□□□ -1.6
CFDP1-208ENST00000569341 RIMS1Q86UR5 1692 aaKnown RBP5.06□□□□□ -1.6
CFDP1-208ENST00000569341 QRICH2Q9H0J4 1663 aa5.06□□□□□ -1.6
CFDP1-208ENST00000569341 ABCC4O15439 1325 aa5.06□□□□□ -1.6
CFDP1-208ENST00000569341 ZNF839A8K0R7 811 aa5.06□□□□□ -1.6
CFDP1-208ENST00000569341 EPB41L2O43491 1005 aaKnown RBP5.06□□□□□ -1.6
CFDP1-208ENST00000569341 CDC45O75419 566 aa5.06□□□□□ -1.6
CFDP1-208ENST00000569341 RAD17O75943 681 aa5.06□□□□□ -1.6
CFDP1-208ENST00000569341 PTMAP06454 111 aaKnown RBP5.06□□□□□ -1.6
CFDP1-208ENST00000569341 HSP90AB1P08238 724 aaKnown RBP5.06□□□□□ -1.6
CFDP1-208ENST00000569341 ENO2P09104 434 aaPredicted RBP5.06□□□□□ -1.6
CFDP1-208ENST00000569341 C1SP09871 688 aa5.06□□□□□ -1.6
CFDP1-208ENST00000569341 MAP4K2Q12851 820 aa5.06□□□□□ -1.6
CFDP1-208ENST00000569341 USP10Q14694 798 aaKnown RBP5.06□□□□□ -1.6
CFDP1-208ENST00000569341 RNF151Q2KHN1 245 aa5.06□□□□□ -1.6
CFDP1-208ENST00000569341 HABP4Q5JVS0 413 aaKnown RBP5.06□□□□□ -1.6
CFDP1-208ENST00000569341 MAMDC4Q6UXC1 1216 aa5.06□□□□□ -1.6
CFDP1-208ENST00000569341 IFNL2Q8IZJ0 200 aa5.06□□□□□ -1.6
CFDP1-208ENST00000569341 IL17DQ8TAD2 202 aa5.06□□□□□ -1.6
CFDP1-208ENST00000569341 UHMK1Q8TAS1 419 aaKnown RBP5.06□□□□□ -1.6
CFDP1-208ENST00000569341 TSR2Q969E8 191 aaKnown RBP5.06□□□□□ -1.6
CFDP1-208ENST00000569341 PHF20Q9BVI0 1012 aa5.06□□□□□ -1.6
CFDP1-208ENST00000569341 CSRNP2Q9H175 543 aa5.06□□□□□ -1.6
CFDP1-208ENST00000569341 GRPEL1Q9HAV7 217 aa5.06□□□□□ -1.6
CFDP1-208ENST00000569341 ST7Q9NRC1 585 aa5.06□□□□□ -1.6
CFDP1-208ENST00000569341 GPR27Q9NS67 375 aa5.06□□□□□ -1.6
CFDP1-208ENST00000569341 EDC4Q6P2E9 1401 aaKnown RBP5.06□□□□□ -1.6
CFDP1-208ENST00000569341 KIAA0232Q92628 1395 aa5.05□□□□□ -1.6
CFDP1-208ENST00000569341 SOS1Q07889 1333 aaPredicted RBP5.05□□□□□ -1.6
CFDP1-208ENST00000569341 A0A1W2PQU0 124 aa5.05□□□□□ -1.6
CFDP1-208ENST00000569341 H0Y858 1186 aa5.05□□□□□ -1.6
CFDP1-208ENST00000569341 ACOT7O00154 380 aa5.05□□□□□ -1.6
CFDP1-208ENST00000569341 MATN2O00339 956 aa5.05□□□□□ -1.6
CFDP1-208ENST00000569341 NKRFO15226 690 aaKnown RBP eCLIP5.05□□□□□ -1.6
CFDP1-208ENST00000569341 HSP90AA1P07900 732 aaKnown RBP5.05□□□□□ -1.6
CFDP1-208ENST00000569341 COL6A2P12110 1019 aa5.05□□□□□ -1.6
CFDP1-208ENST00000569341 MCM2P49736 904 aa5.05□□□□□ -1.6
CFDP1-208ENST00000569341 CCDC173Q0VFZ6 552 aa5.05□□□□□ -1.6
CFDP1-208ENST00000569341 NOLC1Q14978 699 aaKnown RBP eCLIP5.05□□□□□ -1.6
CFDP1-208ENST00000569341 KLHL40Q2TBA0 621 aa5.05□□□□□ -1.6
CFDP1-208ENST00000569341 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
CFDP1-208ENST00000569341 FNDC7Q5VTL7 733 aa5.05□□□□□ -1.6
CFDP1-208ENST00000569341 HNRNPLLQ8WVV9 542 aaKnown RBP5.05□□□□□ -1.6
CFDP1-208ENST00000569341 TRIM44Q96DX7 344 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms