RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 PDAP1Q13442 181 aaKnown RBP7.57□□□□□ -1.2
CNOT1-216ENST00000569240 REXO1L1PQ8IX06 675 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 VPS39Q96JC1 886 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 C1orf50Q9BV19 199 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 PHACTR1Q9C0D0 580 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 TMED5Q9Y3A6 229 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 GRIN2AQ12879 1464 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 H7C0S8 307 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 MBD4O95243 580 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 ATP6V1C1P21283 382 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 NAA30Q147X3 362 aaPredicted RBP7.57□□□□□ -1.2
CNOT1-216ENST00000569240 NR1I3Q14994 352 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 ERP27Q96DN0 273 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 CHAMP1Q96JM3 812 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 COQ7Q99807 217 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 HMG20AQ9NP66 347 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 F8W8V4 182 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 PTGDRQ13258 359 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 TRIP10Q15642 601 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 TRAF7Q6Q0C0 670 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 MAB21L3Q8N8X9 362 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 GDAP1Q8TB36 358 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 SEPT1Q8WYJ6 367 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 PGM2Q96G03 612 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 PGBD1Q96JS3 809 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 RNPC3Q96LT9 517 aaKnown RBP7.57□□□□□ -1.2
CNOT1-216ENST00000569240 CARD14Q9BXL6 1004 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 KLHL4Q9C0H6 718 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 KLC2Q9H0B6 622 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 KRT82Q9NSB4 513 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 DDX56Q9NY93 547 aaKnown RBP7.57□□□□□ -1.2
CNOT1-216ENST00000569240 MAPK8IP1Q9UQF2 711 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 KDM5BQ9UGL1 1544 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 PHF2O75151 1096 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 TSPAN9O75954 239 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 ABCB4P21439 1286 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 TXKP42681 527 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 MYL7Q01449 175 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 PARP6Q2NL67 630 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 PLD3Q8IV08 490 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 RNPEPL1Q9HAU8 725 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 STOML2Q9UJZ1 356 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 L3MBTL1Q9Y468 752 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 AFG3L2Q9Y4W6 797 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 MAST3O60307 1309 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 GCNT3O95395 438 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 TBL3Q12788 808 aaKnown RBP7.57□□□□□ -1.2
CNOT1-216ENST00000569240 GPBP1Q86WP2 473 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 MINDY2Q8NBR6 621 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 LPIN2Q92539 896 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 DGCR14Q96DF8 476 aaKnown RBP7.57□□□□□ -1.2
CNOT1-216ENST00000569240 BLZF1Q9H2G9 400 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 PSMC3IPQ9P2W1 217 aaPredicted RBP7.57□□□□□ -1.2
CNOT1-216ENST00000569240 DCDC2Q9UHG0 476 aa7.57□□□□□ -1.2
CNOT1-216ENST00000569240 CFAP69A5D8W1 941 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 SH3BP5O60239 455 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 DNAJC6O75061 913 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 FTCDO95954 541 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 IFNA8P32881 189 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 GPC5P78333 572 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 EFTUD2Q15029 972 aaKnown RBP eCLIP7.56□□□□□ -1.27e-7■■□□□ 13.7
CNOT1-216ENST00000569240 SURF1Q15526 300 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 ZNF662Q6ZS27 426 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 COPS6Q7L5N1 327 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 EFL1Q7Z2Z2 1120 aaKnown RBP7.56□□□□□ -1.2
CNOT1-216ENST00000569240 NANOGNBQ7Z5D8 188 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 DDX42Q86XP3 938 aaKnown RBP eCLIP7.56□□□□□ -1.2
CNOT1-216ENST00000569240 FAM178BQ8IXR5 827 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 NBPF15Q8N660 670 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 S100ZQ8WXG8 99 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 DLG3Q92796 817 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 SKA1Q96BD8 255 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 MMS19Q96T76 1030 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 PHF23Q9BUL5 403 aaPredicted RBP7.56□□□□□ -1.2
CNOT1-216ENST00000569240 SCN3BQ9NY72 215 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 LCA5LO95447 670 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 RPL5P46777 297 aaKnown RBP7.56□□□□□ -1.2
CNOT1-216ENST00000569240 PCYOX1LQ8NBM8 494 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 A2MP01023 1474 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 POGZQ7Z3K3 1410 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 SAMD9LQ8IVG5 1584 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 CCDC162PA2VCL2 907 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 PARP10Q53GL7 1025 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 TC2NQ8N9U0 490 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 PSPC1Q8WXF1 523 aaKnown RBP7.56□□□□□ -1.2
CNOT1-216ENST00000569240 EME1Q96AY2 570 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 RMDN1Q96DB5 314 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 SIRT1Q96EB6 747 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 SCYL1Q96KG9 808 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 TRABDQ9H4I3 376 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 UVRAGQ9P2Y5 699 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 ACTL7BQ9Y614 415 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 ABCC1P33527 1531 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 BTBD18B2RXH4 712 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 GOLGA8RI6L899 631 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 FAM58BPP0C7Q3 252 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 MSL3P1P0C860 447 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 DDX5P17844 614 aaKnown RBP7.56□□□□□ -1.2
CNOT1-216ENST00000569240 SLC7A5Q01650 507 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 CYP4F22Q6NT55 531 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms