RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 TMTC2Q8N394 836 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 GPR152Q8TDT2 470 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 HDAC7Q8WUI4 952 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 FAM167AQ96KS9 214 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 KLHL5Q96PQ7 755 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 TRAIPQ9BWF2 469 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 FAM126AQ9BYI3 521 aaPredicted RBP9.85□□□□□ -0.83
SMG1-216ENST00000569122 OSBPL6Q9BZF3 934 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 SPATA6Q9NWH7 488 aaPredicted RBP9.85□□□□□ -0.83
SMG1-216ENST00000569122 ZSCAN32Q9NX65 697 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 GMEB2Q9UKD1 530 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 RAB23Q9ULC3 237 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 USP18Q9UMW8 372 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 AKT3Q9Y243 479 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 PCDHB15Q9Y5E8 787 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 KMT2BQ9UMN6 2715 aaPredicted RBP9.85□□□□□ -0.83
SMG1-216ENST00000569122 CEP250Q9BV73 2442 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 CLUHO75153 1309 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 CHD8Q9HCK8 2581 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 FRYLO94915 3013 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 CCDC195A0A1B0GUA6 201 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 FOXD2O60548 495 aaPredicted RBP9.84□□□□□ -0.83
SMG1-216ENST00000569122 DDAH1O94760 285 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 C22orf31O95567 290 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 VTNP04004 478 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 ALDH2P05091 517 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 GALTP07902 379 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 ZNF76P36508 570 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 PFKPQ01813 784 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 PRKCQQ04759 706 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 NOMO2Q5JPE7 1267 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 RSPO2Q6UXX9 243 aaPredicted RBP9.84□□□□□ -0.83
SMG1-216ENST00000569122 NIPA1Q7RTP0 329 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 ZNF598Q86UK7 904 aaKnown RBP9.84□□□□□ -0.83
SMG1-216ENST00000569122 AUTS2Q8WXX7 1259 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 PHKBQ93100 1093 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 PGBD4Q96DM1 585 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 SCLT1Q96NL6 688 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 NELL2Q99435 816 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 INO80BQ9C086 356 aaPredicted RBP9.84□□□□□ -0.83
SMG1-216ENST00000569122 GLT8D2Q9H1C3 349 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 PIDD1Q9HB75 910 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 AGO4Q9HCK5 861 aaKnown RBP9.84□□□□□ -0.83
SMG1-216ENST00000569122 KANSL3Q9P2N6 904 aa9.84□□□□□ -0.83
SMG1-216ENST00000569122 KAT6AQ92794 2004 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 OTOGLQ3ZCN5 2332 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 KANSL1LA0AUZ9 987 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 DCDC2BA2VCK2 349 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 MEIS1O00470 390 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 URODP06132 367 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 CNPP09543 421 aaKnown RBP9.83□□□□□ -0.84
SMG1-216ENST00000569122 CALM1P0DP23 149 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 CALM2P0DP24 149 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 CALM3P0DP25 149 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 LAMP2P13473 410 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 DARSP14868 501 aaKnown RBP9.83□□□□□ -0.84
SMG1-216ENST00000569122 NRLP54845 237 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 CSTF1Q05048 431 aaKnown RBP9.83□□□□□ -0.84
SMG1-216ENST00000569122 PPP2R5DQ14738 602 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 SWSAP1Q6NVH7 229 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 EFCAB12Q6NXP0 572 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 ZBTB44Q8NCP5 570 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 NCOA7Q8NI08 942 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 URGCPQ8TCY9 931 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 NETO1Q8TDF5 533 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 RSAD2Q8WXG1 361 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 FAM193BQ96PV7 902 aaPredicted RBP9.83□□□□□ -0.84
SMG1-216ENST00000569122 PPP1R16BQ96T49 567 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 MTA3Q9BTC8 594 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 GCOM2Q9BZD3 368 aaPredicted RBP9.83□□□□□ -0.84
SMG1-216ENST00000569122 EPC1Q9H2F5 836 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 ADAMTS10Q9H324 1103 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 PLEKHA4Q9H4M7 779 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 MAN1C1Q9NR34 630 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 NRBP2Q9NSY0 501 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 TBC1D22BQ9NU19 505 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 SMG5Q9UPR3 1016 aaKnown RBP9.83□□□□□ -0.84
SMG1-216ENST00000569122 MYO10Q9HD67 2058 aa9.83□□□□□ -0.84
SMG1-216ENST00000569122 ZBTB42B2RXF5 422 aa9.82□□□□□ -0.84
SMG1-216ENST00000569122 ANHXE9PGG2 379 aa9.82□□□□□ -0.84
SMG1-216ENST00000569122 INPPL1O15357 1258 aa9.82□□□□□ -0.84
SMG1-216ENST00000569122 LRP3O75074 770 aa9.82□□□□□ -0.84
SMG1-216ENST00000569122 GLUD1P00367 558 aa9.82□□□□□ -0.84
SMG1-216ENST00000569122 PSAPP07602 524 aa9.82□□□□□ -0.84
SMG1-216ENST00000569122 ARP10275 920 aa9.82□□□□□ -0.84
SMG1-216ENST00000569122 SFPQP23246 707 aaKnown RBP eCLIP9.82□□□□□ -0.84
SMG1-216ENST00000569122 PHKA2P46019 1235 aa9.82□□□□□ -0.84
SMG1-216ENST00000569122 RAB27AP51159 221 aa9.82□□□□□ -0.84
SMG1-216ENST00000569122 ITGB3BPQ13352 177 aaPredicted RBP9.82□□□□□ -0.84
SMG1-216ENST00000569122 ZNF746Q6NUN9 644 aaPredicted RBP9.82□□□□□ -0.84
SMG1-216ENST00000569122 SMAP1Q8IYB5 467 aaPredicted RBP9.82□□□□□ -0.84
SMG1-216ENST00000569122 NLRP7Q8WX94 980 aa9.82□□□□□ -0.84
SMG1-216ENST00000569122 SMG7Q92540 1137 aaKnown RBP9.82□□□□□ -0.84
SMG1-216ENST00000569122 TMEM175Q9BSA9 504 aa9.82□□□□□ -0.84
SMG1-216ENST00000569122 NRDE2Q9H7Z3 1164 aa9.82□□□□□ -0.84
SMG1-216ENST00000569122 ZDHHC7Q9NXF8 308 aa9.82□□□□□ -0.84
SMG1-216ENST00000569122 FAN1Q9Y2M0 1017 aa9.82□□□□□ -0.84
SMG1-216ENST00000569122 MAFBQ9Y5Q3 323 aaPredicted RBP9.82□□□□□ -0.84
SMG1-216ENST00000569122 PLXNA4Q9HCM2 1894 aa9.82□□□□□ -0.84
SMG1-216ENST00000569122 FAM170BA6NMN3 283 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms